RNA–Protein interactions for RNA: ENST00000477514.1

ITGB6-208, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 331 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-208ENST00000477514 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
ITGB6-208ENST00000477514 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
ITGB6-208ENST00000477514 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
ITGB6-208ENST00000477514 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
ITGB6-208ENST00000477514 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
ITGB6-208ENST00000477514 FOXD1Q16676 465 aa15.84■□□□□ 0.13
ITGB6-208ENST00000477514 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
ITGB6-208ENST00000477514 ADRA2BP18089 450 aa15.28■□□□□ 0.04
ITGB6-208ENST00000477514 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
ITGB6-208ENST00000477514 MSH5O43196 834 aa14.64□□□□□ -0.07
ITGB6-208ENST00000477514 PPP4R3CPQ6ZMV5 832 aa14.18□□□□□ -0.14
ITGB6-208ENST00000477514 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
ITGB6-208ENST00000477514 KCNA4P22459 653 aa13.91□□□□□ -0.18
ITGB6-208ENST00000477514 NCBP3Q53F19 620 aaKnown RBP13.88□□□□□ -0.19
ITGB6-208ENST00000477514 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
ITGB6-208ENST00000477514 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
ITGB6-208ENST00000477514 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
ITGB6-208ENST00000477514 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
ITGB6-208ENST00000477514 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
ITGB6-208ENST00000477514 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
ITGB6-208ENST00000477514 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
ITGB6-208ENST00000477514 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
ITGB6-208ENST00000477514 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
ITGB6-208ENST00000477514 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
ITGB6-208ENST00000477514 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
ITGB6-208ENST00000477514 SLC4A2P04920 1241 aa12.83□□□□□ -0.36
ITGB6-208ENST00000477514 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
ITGB6-208ENST00000477514 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
ITGB6-208ENST00000477514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.36
ITGB6-208ENST00000477514 ZBTB22O15209 634 aa12.77□□□□□ -0.37
ITGB6-208ENST00000477514 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
ITGB6-208ENST00000477514 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
ITGB6-208ENST00000477514 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
ITGB6-208ENST00000477514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.52□□□□□ -0.41
ITGB6-208ENST00000477514 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.41
ITGB6-208ENST00000477514 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
ITGB6-208ENST00000477514 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
ITGB6-208ENST00000477514 C1QBPQ07021 282 aaKnown RBP12.41□□□□□ -0.42
ITGB6-208ENST00000477514 APLP2Q06481 763 aa12.37□□□□□ -0.43
ITGB6-208ENST00000477514 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
ITGB6-208ENST00000477514 SPINK5Q9NQ38 1064 aaPredicted RBP12.17□□□□□ -0.46
ITGB6-208ENST00000477514 CAPN15O75808 1086 aa12.15□□□□□ -0.46
ITGB6-208ENST00000477514 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
ITGB6-208ENST00000477514 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
ITGB6-208ENST00000477514 TRHP20396 242 aaPredicted RBP12.1□□□□□ -0.47
ITGB6-208ENST00000477514 POLA2Q14181 598 aa11.94□□□□□ -0.5
ITGB6-208ENST00000477514 DSG3P32926 999 aa11.93□□□□□ -0.5
ITGB6-208ENST00000477514 ABCB7O75027 752 aa11.89□□□□□ -0.51
ITGB6-208ENST00000477514 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
ITGB6-208ENST00000477514 FBLN2P98095 1184 aa11.76□□□□□ -0.53
ITGB6-208ENST00000477514 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
ITGB6-208ENST00000477514 FKBP8Q14318 412 aa11.55□□□□□ -0.56
ITGB6-208ENST00000477514 SPDYE4A6NLX3 237 aa11.5□□□□□ -0.57
ITGB6-208ENST00000477514 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
ITGB6-208ENST00000477514 SPDYE2BA6NHP3 402 aa11.46□□□□□ -0.57
ITGB6-208ENST00000477514 SPDYE6P0CI01 402 aa11.46□□□□□ -0.57
ITGB6-208ENST00000477514 SPDYE2Q495Y8 402 aa11.46□□□□□ -0.57
ITGB6-208ENST00000477514 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
ITGB6-208ENST00000477514 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
ITGB6-208ENST00000477514 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
ITGB6-208ENST00000477514 PROM2Q8N271 834 aa11.33□□□□□ -0.6
ITGB6-208ENST00000477514 AKT1S1Q96B36 256 aa11.27□□□□□ -0.61
ITGB6-208ENST00000477514 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
ITGB6-208ENST00000477514 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
ITGB6-208ENST00000477514 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
ITGB6-208ENST00000477514 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
ITGB6-208ENST00000477514 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
ITGB6-208ENST00000477514 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
ITGB6-208ENST00000477514 PITPNM1O00562 1244 aa11□□□□□ -0.65
ITGB6-208ENST00000477514 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
ITGB6-208ENST00000477514 PRR29P0C7W0 189 aa10.95□□□□□ -0.66
ITGB6-208ENST00000477514 MIER1Q8N108 512 aa10.91□□□□□ -0.66
ITGB6-208ENST00000477514 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
ITGB6-208ENST00000477514 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
ITGB6-208ENST00000477514 CHRDL2Q6WN34 429 aa10.88□□□□□ -0.67
ITGB6-208ENST00000477514 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
ITGB6-208ENST00000477514 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
ITGB6-208ENST00000477514 FXR2P51116 673 aaKnown RBP eCLIP10.8□□□□□ -0.68
ITGB6-208ENST00000477514 KLHL34Q8N239 644 aa10.8□□□□□ -0.68
ITGB6-208ENST00000477514 CREBZFQ9NS37 354 aa10.8□□□□□ -0.68
ITGB6-208ENST00000477514 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
ITGB6-208ENST00000477514 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
ITGB6-208ENST00000477514 SPOCK2Q92563 424 aa10.73□□□□□ -0.69
ITGB6-208ENST00000477514 MNX1P50219 401 aaPredicted RBP10.71□□□□□ -0.69
ITGB6-208ENST00000477514 CHADLQ6NUI6 762 aa10.71□□□□□ -0.69
ITGB6-208ENST00000477514 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
ITGB6-208ENST00000477514 NPM1P06748 294 aaKnown RBP eCLIP10.68□□□□□ -0.7
ITGB6-208ENST00000477514 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
ITGB6-208ENST00000477514 NUBP1P53384 320 aa10.6□□□□□ -0.71
ITGB6-208ENST00000477514 RTN4Q9NQC3 1192 aaKnown RBP10.6□□□□□ -0.71
ITGB6-208ENST00000477514 GSE1Q14687 1217 aa10.55□□□□□ -0.72
ITGB6-208ENST00000477514 FAM212AQ96EL1 285 aa10.54□□□□□ -0.72
ITGB6-208ENST00000477514 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
ITGB6-208ENST00000477514 DCAF8Q5TAQ9 597 aa10.52□□□□□ -0.73
ITGB6-208ENST00000477514 CIZ1Q9ULV3 898 aaPredicted RBP10.52□□□□□ -0.73
ITGB6-208ENST00000477514 PKD2Q13563 968 aa10.5□□□□□ -0.73
ITGB6-208ENST00000477514 TRIM41Q8WV44 630 aa10.48□□□□□ -0.73
ITGB6-208ENST00000477514 PAK3O75914 559 aaPredicted RBP10.47□□□□□ -0.73
ITGB6-208ENST00000477514 POTEHQ6S545 545 aa10.45□□□□□ -0.74
ITGB6-208ENST00000477514 TSPYL2Q9H2G4 693 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms