RNA–Protein interactions for RNA: ENST00000477484.1

SECISBP2-206, Transcript of SECIS binding protein 2, humanhuman

TSL 3

Gene SECISBP2, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-206ENST00000477484 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
SECISBP2-206ENST00000477484 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
SECISBP2-206ENST00000477484 SENP3Q9H4L4 574 aaPredicted RBP23.5■■□□□ 1.35
SECISBP2-206ENST00000477484 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
SECISBP2-206ENST00000477484 FOXD1Q16676 465 aa21.86■■□□□ 1.09
SECISBP2-206ENST00000477484 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.97
SECISBP2-206ENST00000477484 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
SECISBP2-206ENST00000477484 ADRA2BP18089 450 aa20.48■□□□□ 0.87
SECISBP2-206ENST00000477484 PIAS4Q8N2W9 510 aaPredicted RBP20.47■□□□□ 0.87
SECISBP2-206ENST00000477484 MSH5O43196 834 aa20.43■□□□□ 0.86
SECISBP2-206ENST00000477484 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
SECISBP2-206ENST00000477484 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
SECISBP2-206ENST00000477484 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
SECISBP2-206ENST00000477484 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
SECISBP2-206ENST00000477484 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
SECISBP2-206ENST00000477484 KCNA4P22459 653 aa18.19■□□□□ 0.5
SECISBP2-206ENST00000477484 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
SECISBP2-206ENST00000477484 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
SECISBP2-206ENST00000477484 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
SECISBP2-206ENST00000477484 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
SECISBP2-206ENST00000477484 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
SECISBP2-206ENST00000477484 NPM3O75607 178 aaKnown RBP17.7■□□□□ 0.42
SECISBP2-206ENST00000477484 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
SECISBP2-206ENST00000477484 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
SECISBP2-206ENST00000477484 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
SECISBP2-206ENST00000477484 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.36
SECISBP2-206ENST00000477484 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
SECISBP2-206ENST00000477484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.343e-6■■■■□ 20.1
SECISBP2-206ENST00000477484 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
SECISBP2-206ENST00000477484 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
SECISBP2-206ENST00000477484 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
SECISBP2-206ENST00000477484 ZBTB22O15209 634 aa16.74■□□□□ 0.27
SECISBP2-206ENST00000477484 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
SECISBP2-206ENST00000477484 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
SECISBP2-206ENST00000477484 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
SECISBP2-206ENST00000477484 CAPN15O75808 1086 aa16.49■□□□□ 0.23
SECISBP2-206ENST00000477484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.41■□□□□ 0.22
SECISBP2-206ENST00000477484 HNRNPUL2Q1KMD3 747 aaKnown RBP16.41■□□□□ 0.22
SECISBP2-206ENST00000477484 APLP2Q06481 763 aa16.39■□□□□ 0.21
SECISBP2-206ENST00000477484 DSG3P32926 999 aa16.38■□□□□ 0.21
SECISBP2-206ENST00000477484 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
SECISBP2-206ENST00000477484 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
SECISBP2-206ENST00000477484 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
SECISBP2-206ENST00000477484 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
SECISBP2-206ENST00000477484 ABCB7O75027 752 aa16.11■□□□□ 0.17
SECISBP2-206ENST00000477484 ATXN8OSP0DMR3 200 aa16.01■□□□□ 0.15
SECISBP2-206ENST00000477484 ATF5Q9Y2D1 282 aaPredicted RBP15.94■□□□□ 0.14
SECISBP2-206ENST00000477484 POLA2Q14181 598 aa15.84■□□□□ 0.13
SECISBP2-206ENST00000477484 RBM42Q9BTD8 480 aaKnown RBP15.64■□□□□ 0.09
SECISBP2-206ENST00000477484 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
SECISBP2-206ENST00000477484 POTEHQ6S545 545 aa15.46■□□□□ 0.07
SECISBP2-206ENST00000477484 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
SECISBP2-206ENST00000477484 AKT1S1Q96B36 256 aa15.3■□□□□ 0.04
SECISBP2-206ENST00000477484 FBLN2P98095 1184 aa15.24■□□□□ 0.03
SECISBP2-206ENST00000477484 MKRN4PQ13434 485 aaPredicted RBP15.24■□□□□ 0.03
SECISBP2-206ENST00000477484 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
SECISBP2-206ENST00000477484 FKBP8Q14318 412 aa15.17■□□□□ 0.02
SECISBP2-206ENST00000477484 REM2Q8IYK8 340 aaPredicted RBP15.14■□□□□ 0.01
SECISBP2-206ENST00000477484 SPDYE2BA6NHP3 402 aa15.1■□□□□ 0.01
SECISBP2-206ENST00000477484 SPDYE6P0CI01 402 aa15.1■□□□□ 0.01
SECISBP2-206ENST00000477484 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
SECISBP2-206ENST00000477484 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
SECISBP2-206ENST00000477484 SPDYE4A6NLX3 237 aa14.96□□□□□ -0.01
SECISBP2-206ENST00000477484 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
SECISBP2-206ENST00000477484 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
SECISBP2-206ENST00000477484 PIP4P2Q8N4L2 257 aa14.89□□□□□ -0.03
SECISBP2-206ENST00000477484 FXR2P51116 673 aaKnown RBP eCLIP14.83□□□□□ -0.04
SECISBP2-206ENST00000477484 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
SECISBP2-206ENST00000477484 CLEC11AQ9Y240 323 aa14.74□□□□□ -0.05
SECISBP2-206ENST00000477484 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
SECISBP2-206ENST00000477484 PROM2Q8N271 834 aa14.69□□□□□ -0.06
SECISBP2-206ENST00000477484 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
SECISBP2-206ENST00000477484 HAX1O00165 279 aa14.56□□□□□ -0.08
SECISBP2-206ENST00000477484 SP7Q8TDD2 431 aaPredicted RBP14.56□□□□□ -0.08
SECISBP2-206ENST00000477484 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
SECISBP2-206ENST00000477484 PRR29P0C7W0 189 aa14.52□□□□□ -0.09
SECISBP2-206ENST00000477484 CHADLQ6NUI6 762 aa14.44□□□□□ -0.1
SECISBP2-206ENST00000477484 EVX2Q03828 476 aa14.39□□□□□ -0.11
SECISBP2-206ENST00000477484 C19orf67A6NJJ6 358 aa14.35□□□□□ -0.11
SECISBP2-206ENST00000477484 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
SECISBP2-206ENST00000477484 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
SECISBP2-206ENST00000477484 FARP1Q9Y4F1 1045 aaPredicted RBP14.26□□□□□ -0.13
SECISBP2-206ENST00000477484 MIER1Q8N108 512 aa14.21□□□□□ -0.13
SECISBP2-206ENST00000477484 IFNLR1Q8IU57 520 aaPredicted RBP14.2□□□□□ -0.14
SECISBP2-206ENST00000477484 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
SECISBP2-206ENST00000477484 PLCD3Q8N3E9 789 aa14.19□□□□□ -0.14
SECISBP2-206ENST00000477484 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
SECISBP2-206ENST00000477484 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
SECISBP2-206ENST00000477484 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
SECISBP2-206ENST00000477484 GABBR2O75899 941 aa14.09□□□□□ -0.15
SECISBP2-206ENST00000477484 AMER1Q5JTC6 1135 aaPredicted RBP14.08□□□□□ -0.16
SECISBP2-206ENST00000477484 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
SECISBP2-206ENST00000477484 MNX1P50219 401 aaPredicted RBP13.98□□□□□ -0.17
SECISBP2-206ENST00000477484 SPOCK2Q92563 424 aa13.98□□□□□ -0.17
SECISBP2-206ENST00000477484 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
SECISBP2-206ENST00000477484 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
SECISBP2-206ENST00000477484 CLCN6P51797 869 aa13.95□□□□□ -0.18
SECISBP2-206ENST00000477484 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
SECISBP2-206ENST00000477484 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
SECISBP2-206ENST00000477484 PAK3O75914 559 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms