RNA–Protein interactions for RNA: ENST00000477435.1

SEL1L2-207, Transcript of SEL1L2, ERAD E3 ligase adaptor subunit, humanhuman

TSL 3

Gene SEL1L2, Length 439 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L2-207ENST00000477435 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
SEL1L2-207ENST00000477435 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
SEL1L2-207ENST00000477435 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
SEL1L2-207ENST00000477435 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
SEL1L2-207ENST00000477435 FOXD1Q16676 465 aa18.62■□□□□ 0.57
SEL1L2-207ENST00000477435 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
SEL1L2-207ENST00000477435 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
SEL1L2-207ENST00000477435 MSH5O43196 834 aa17.42■□□□□ 0.38
SEL1L2-207ENST00000477435 ADRA2BP18089 450 aa17.36■□□□□ 0.37
SEL1L2-207ENST00000477435 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
SEL1L2-207ENST00000477435 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
SEL1L2-207ENST00000477435 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
SEL1L2-207ENST00000477435 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
SEL1L2-207ENST00000477435 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
SEL1L2-207ENST00000477435 PPP4R3CPQ6ZMV5 832 aa15.63■□□□□ 0.09
SEL1L2-207ENST00000477435 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
SEL1L2-207ENST00000477435 HOXD11P31277 338 aaPredicted RBP15.34■□□□□ 0.05
SEL1L2-207ENST00000477435 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
SEL1L2-207ENST00000477435 DCAF8L1A6NGE4 600 aa15.06■□□□□ 0
SEL1L2-207ENST00000477435 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ -0
SEL1L2-207ENST00000477435 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
SEL1L2-207ENST00000477435 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
SEL1L2-207ENST00000477435 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
SEL1L2-207ENST00000477435 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
SEL1L2-207ENST00000477435 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
SEL1L2-207ENST00000477435 KCNA4P22459 653 aa14.56□□□□□ -0.08
SEL1L2-207ENST00000477435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.51□□□□□ -0.09
SEL1L2-207ENST00000477435 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
SEL1L2-207ENST00000477435 SLC4A2P04920 1241 aa14.18□□□□□ -0.14
SEL1L2-207ENST00000477435 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
SEL1L2-207ENST00000477435 CAPN15O75808 1086 aa13.94□□□□□ -0.18
SEL1L2-207ENST00000477435 DSG3P32926 999 aa13.93□□□□□ -0.18
SEL1L2-207ENST00000477435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
SEL1L2-207ENST00000477435 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
SEL1L2-207ENST00000477435 APLP2Q06481 763 aa13.87□□□□□ -0.19
SEL1L2-207ENST00000477435 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
SEL1L2-207ENST00000477435 ZNF219Q9P2Y4 722 aaPredicted RBP13.76□□□□□ -0.21
SEL1L2-207ENST00000477435 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
SEL1L2-207ENST00000477435 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
SEL1L2-207ENST00000477435 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
SEL1L2-207ENST00000477435 ABCB7O75027 752 aa13.61□□□□□ -0.23
SEL1L2-207ENST00000477435 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
SEL1L2-207ENST00000477435 POLA2Q14181 598 aa13.42□□□□□ -0.26
SEL1L2-207ENST00000477435 ZBTB22O15209 634 aa13.4□□□□□ -0.26
SEL1L2-207ENST00000477435 ATF5Q9Y2D1 282 aaPredicted RBP13.38□□□□□ -0.27
SEL1L2-207ENST00000477435 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
SEL1L2-207ENST00000477435 POTEHQ6S545 545 aa13.25□□□□□ -0.29
SEL1L2-207ENST00000477435 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
SEL1L2-207ENST00000477435 ZBTB12Q9Y330 459 aaPredicted RBP13.18□□□□□ -0.3
SEL1L2-207ENST00000477435 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
SEL1L2-207ENST00000477435 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
SEL1L2-207ENST00000477435 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
SEL1L2-207ENST00000477435 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
SEL1L2-207ENST00000477435 FBLN2P98095 1184 aa12.84□□□□□ -0.35
SEL1L2-207ENST00000477435 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
SEL1L2-207ENST00000477435 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
SEL1L2-207ENST00000477435 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
SEL1L2-207ENST00000477435 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
SEL1L2-207ENST00000477435 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
SEL1L2-207ENST00000477435 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
SEL1L2-207ENST00000477435 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
SEL1L2-207ENST00000477435 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
SEL1L2-207ENST00000477435 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
SEL1L2-207ENST00000477435 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
SEL1L2-207ENST00000477435 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
SEL1L2-207ENST00000477435 SPDYE1Q8NFV5 336 aaPredicted RBP12.53□□□□□ -0.4
SEL1L2-207ENST00000477435 SP7Q8TDD2 431 aaPredicted RBP12.44□□□□□ -0.42
SEL1L2-207ENST00000477435 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
SEL1L2-207ENST00000477435 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
SEL1L2-207ENST00000477435 HAX1O00165 279 aa12.38□□□□□ -0.43
SEL1L2-207ENST00000477435 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
SEL1L2-207ENST00000477435 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
SEL1L2-207ENST00000477435 EVX2Q03828 476 aa12.28□□□□□ -0.44
SEL1L2-207ENST00000477435 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
SEL1L2-207ENST00000477435 CHADLQ6NUI6 762 aa12.2□□□□□ -0.46
SEL1L2-207ENST00000477435 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
SEL1L2-207ENST00000477435 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
SEL1L2-207ENST00000477435 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
SEL1L2-207ENST00000477435 CREBZFQ9NS37 354 aa12.02□□□□□ -0.49
SEL1L2-207ENST00000477435 GABBR2O75899 941 aa12.01□□□□□ -0.49
SEL1L2-207ENST00000477435 PROM2Q8N271 834 aa11.99□□□□□ -0.49
SEL1L2-207ENST00000477435 CD44P16070 742 aaKnown RBP11.96□□□□□ -0.49
SEL1L2-207ENST00000477435 CLCN6P51797 869 aa11.93□□□□□ -0.5
SEL1L2-207ENST00000477435 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
SEL1L2-207ENST00000477435 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
SEL1L2-207ENST00000477435 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
SEL1L2-207ENST00000477435 NPM1P06748 294 aaKnown RBP eCLIP11.79□□□□□ -0.52
SEL1L2-207ENST00000477435 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
SEL1L2-207ENST00000477435 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.53
SEL1L2-207ENST00000477435 LHX8Q68G74 356 aa11.67□□□□□ -0.54
SEL1L2-207ENST00000477435 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
SEL1L2-207ENST00000477435 GALR2O43603 387 aaPredicted RBP11.64□□□□□ -0.55
SEL1L2-207ENST00000477435 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
SEL1L2-207ENST00000477435 MIER1Q8N108 512 aa11.6□□□□□ -0.55
SEL1L2-207ENST00000477435 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
SEL1L2-207ENST00000477435 FKBP8Q14318 412 aa11.56□□□□□ -0.56
SEL1L2-207ENST00000477435 CCDC61Q9Y6R9 512 aa11.54□□□□□ -0.56
SEL1L2-207ENST00000477435 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
SEL1L2-207ENST00000477435 MS4A3Q96HJ5 214 aa11.49□□□□□ -0.57
SEL1L2-207ENST00000477435 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms