RNA–Protein interactions for RNA: ENST00000477426.1

GBE1-202, Transcript of 1,4-alpha-glucan branching enzyme 1, humanhuman

TSL 2

Gene GBE1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBE1-202ENST00000477426 AEBP2Q6ZN18 517 aaPredicted RBP35.01■■■■□ 3.2
GBE1-202ENST00000477426 CHIC1Q5VXU3 224 aa33.51■■■□□ 2.95
GBE1-202ENST00000477426 SENP3Q9H4L4 574 aaPredicted RBP29.62■■■□□ 2.33
GBE1-202ENST00000477426 PHF23Q9BUL5 403 aaPredicted RBP29.5■■■□□ 2.31
GBE1-202ENST00000477426 FOXD1Q16676 465 aa27.69■■■□□ 2.02
GBE1-202ENST00000477426 PLPPR3Q6T4P5 718 aa26.89■■□□□ 1.9
GBE1-202ENST00000477426 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
GBE1-202ENST00000477426 ADRA2BP18089 450 aa26.17■■□□□ 1.78
GBE1-202ENST00000477426 PIAS4Q8N2W9 510 aaPredicted RBP25.9■■□□□ 1.74
GBE1-202ENST00000477426 POTEDQ86YR6 584 aa25.85■■□□□ 1.73
GBE1-202ENST00000477426 MSH5O43196 834 aa25.61■■□□□ 1.69
GBE1-202ENST00000477426 MAPK8IP2Q13387 824 aaPredicted RBP23.96■■□□□ 1.43
GBE1-202ENST00000477426 SCAF1Q9H7N4 1312 aaKnown RBP23.74■■□□□ 1.39
GBE1-202ENST00000477426 PPP4R3CPQ6ZMV5 832 aa23.68■■□□□ 1.38
GBE1-202ENST00000477426 DMRT2Q9Y5R5 561 aa23.59■■□□□ 1.37
GBE1-202ENST00000477426 CNKSR2Q8WXI2 1034 aa23.09■■□□□ 1.29
GBE1-202ENST00000477426 HOXD11P31277 338 aaPredicted RBP22.88■■□□□ 1.25
GBE1-202ENST00000477426 RNF216Q9NWF9 866 aaPredicted RBP22.78■■□□□ 1.24
GBE1-202ENST00000477426 NCBP3Q53F19 620 aaKnown RBP22.77■■□□□ 1.24
GBE1-202ENST00000477426 DCAF8L1A6NGE4 600 aa22.63■■□□□ 1.21
GBE1-202ENST00000477426 NPM3O75607 178 aaKnown RBP22.59■■□□□ 1.21
GBE1-202ENST00000477426 KCNA4P22459 653 aa22.53■■□□□ 1.2
GBE1-202ENST00000477426 CACNB1Q02641 598 aaPredicted RBP22.13■■□□□ 1.13
GBE1-202ENST00000477426 RNF39Q9H2S5 420 aa21.97■■□□□ 1.11
GBE1-202ENST00000477426 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
GBE1-202ENST00000477426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.78■■□□□ 1.08
GBE1-202ENST00000477426 C1QBPQ07021 282 aaKnown RBP21.61■■□□□ 1.05
GBE1-202ENST00000477426 SLC4A2P04920 1241 aa21.51■■□□□ 1.03
GBE1-202ENST00000477426 U3KPZ7 1027 aaPredicted RBP21.43■■□□□ 1.02
GBE1-202ENST00000477426 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■■□□□ 1
GBE1-202ENST00000477426 SPINK5Q9NQ38 1064 aaPredicted RBP21.05■□□□□ 0.96
GBE1-202ENST00000477426 CAPN15O75808 1086 aa20.91■□□□□ 0.94
GBE1-202ENST00000477426 FOXD4L1Q9NU39 408 aa20.8■□□□□ 0.92
GBE1-202ENST00000477426 MYCNP04198 464 aaPredicted RBP20.79■□□□□ 0.92
GBE1-202ENST00000477426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.78■□□□□ 0.92
GBE1-202ENST00000477426 ZBTB22O15209 634 aa20.78■□□□□ 0.92
GBE1-202ENST00000477426 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
GBE1-202ENST00000477426 DSG3P32926 999 aa20.72■□□□□ 0.91
GBE1-202ENST00000477426 SAMD1Q6SPF0 538 aaPredicted RBP20.72■□□□□ 0.91
GBE1-202ENST00000477426 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
GBE1-202ENST00000477426 APLP2Q06481 763 aa20.65■□□□□ 0.9
GBE1-202ENST00000477426 ZNF219Q9P2Y4 722 aaPredicted RBP20.57■□□□□ 0.88
GBE1-202ENST00000477426 ABCB7O75027 752 aa20.53■□□□□ 0.88
GBE1-202ENST00000477426 ATF5Q9Y2D1 282 aaPredicted RBP20.46■□□□□ 0.87
GBE1-202ENST00000477426 POLA2Q14181 598 aa20.23■□□□□ 0.83
GBE1-202ENST00000477426 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
GBE1-202ENST00000477426 POTEHQ6S545 545 aa20.12■□□□□ 0.81
GBE1-202ENST00000477426 ATXN8OSP0DMR3 200 aa20.07■□□□□ 0.8
GBE1-202ENST00000477426 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
GBE1-202ENST00000477426 ZBTB12Q9Y330 459 aaPredicted RBP19.69■□□□□ 0.74
GBE1-202ENST00000477426 RBM42Q9BTD8 480 aaKnown RBP19.62■□□□□ 0.73
GBE1-202ENST00000477426 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
GBE1-202ENST00000477426 MKRN4PQ13434 485 aaPredicted RBP19.5■□□□□ 0.71
GBE1-202ENST00000477426 FBLN2P98095 1184 aa19.43■□□□□ 0.7
GBE1-202ENST00000477426 AKT1S1Q96B36 256 aa19.32■□□□□ 0.68
GBE1-202ENST00000477426 REM2Q8IYK8 340 aaPredicted RBP19.2■□□□□ 0.66
GBE1-202ENST00000477426 SPDYE2BA6NHP3 402 aa19.18■□□□□ 0.66
GBE1-202ENST00000477426 SPDYE6P0CI01 402 aa19.18■□□□□ 0.66
GBE1-202ENST00000477426 SPDYE2Q495Y8 402 aa19.18■□□□□ 0.66
GBE1-202ENST00000477426 CHRDL2Q6WN34 429 aa19.14■□□□□ 0.65
GBE1-202ENST00000477426 ZNF692Q9BU19 519 aaPredicted RBP19.07■□□□□ 0.64
GBE1-202ENST00000477426 SSUH2Q9Y2M2 353 aa19.03■□□□□ 0.64
GBE1-202ENST00000477426 PITPNM1O00562 1244 aa19■□□□□ 0.63
GBE1-202ENST00000477426 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
GBE1-202ENST00000477426 PIP4P2Q8N4L2 257 aa18.81■□□□□ 0.6
GBE1-202ENST00000477426 CLEC11AQ9Y240 323 aa18.78■□□□□ 0.6
GBE1-202ENST00000477426 SPDYE1Q8NFV5 336 aaPredicted RBP18.75■□□□□ 0.59
GBE1-202ENST00000477426 FXR2P51116 673 aaKnown RBP eCLIP18.74■□□□□ 0.59
GBE1-202ENST00000477426 SPDYE4A6NLX3 237 aa18.69■□□□□ 0.58
GBE1-202ENST00000477426 SP7Q8TDD2 431 aaPredicted RBP18.58■□□□□ 0.56
GBE1-202ENST00000477426 PRKAR2AP13861 404 aaKnown RBP18.5■□□□□ 0.55
GBE1-202ENST00000477426 PRR29P0C7W0 189 aa18.48■□□□□ 0.55
GBE1-202ENST00000477426 CHADLQ6NUI6 762 aa18.45■□□□□ 0.54
GBE1-202ENST00000477426 HAX1O00165 279 aa18.34■□□□□ 0.53
GBE1-202ENST00000477426 PROM2Q8N271 834 aa18.31■□□□□ 0.52
GBE1-202ENST00000477426 EVX2Q03828 476 aa18.28■□□□□ 0.52
GBE1-202ENST00000477426 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.52
GBE1-202ENST00000477426 FKBP8Q14318 412 aa18.19■□□□□ 0.5
GBE1-202ENST00000477426 CREBZFQ9NS37 354 aa18.18■□□□□ 0.5
GBE1-202ENST00000477426 FARP1Q9Y4F1 1045 aaPredicted RBP18.13■□□□□ 0.49
GBE1-202ENST00000477426 C19orf67A6NJJ6 358 aa18.12■□□□□ 0.49
GBE1-202ENST00000477426 MNX1P50219 401 aaPredicted RBP17.95■□□□□ 0.46
GBE1-202ENST00000477426 CD44P16070 742 aaKnown RBP17.92■□□□□ 0.46
GBE1-202ENST00000477426 GABBR2O75899 941 aa17.79■□□□□ 0.44
GBE1-202ENST00000477426 MIER1Q8N108 512 aa17.78■□□□□ 0.44
GBE1-202ENST00000477426 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
GBE1-202ENST00000477426 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
GBE1-202ENST00000477426 PLCD3Q8N3E9 789 aa17.66■□□□□ 0.42
GBE1-202ENST00000477426 ZNF579Q8NAF0 562 aaKnown RBP17.64■□□□□ 0.41
GBE1-202ENST00000477426 PLEKHG5O94827 1062 aa17.59■□□□□ 0.41
GBE1-202ENST00000477426 PHF12Q96QT6 1004 aa17.57■□□□□ 0.4
GBE1-202ENST00000477426 FBXO3Q9UK99 471 aa17.57■□□□□ 0.4
GBE1-202ENST00000477426 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
GBE1-202ENST00000477426 TSPYL2Q9H2G4 693 aaPredicted RBP17.55■□□□□ 0.4
GBE1-202ENST00000477426 RASEFQ8IZ41 740 aa17.51■□□□□ 0.39
GBE1-202ENST00000477426 GALR2O43603 387 aaPredicted RBP17.48■□□□□ 0.39
GBE1-202ENST00000477426 POTEIP0CG38 1075 aa17.48■□□□□ 0.39
GBE1-202ENST00000477426 VASPP50552 380 aaPredicted RBP17.44■□□□□ 0.38
GBE1-202ENST00000477426 CLCN6P51797 869 aa17.44■□□□□ 0.38
GBE1-202ENST00000477426 NUBP1P53384 320 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms