RNA–Protein interactions for RNA: ENST00000477406.1

FAM208A-205, Transcript of family with sequence similarity 208 member A, humanhuman

TSL 2

Gene FAM208A, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-205ENST00000477406 AEBP2Q6ZN18 517 aaPredicted RBP24.88■■□□□ 1.57
FAM208A-205ENST00000477406 CHIC1Q5VXU3 224 aa23.23■■□□□ 1.31
FAM208A-205ENST00000477406 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
FAM208A-205ENST00000477406 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
FAM208A-205ENST00000477406 POTEDQ86YR6 584 aa19.87■□□□□ 0.77
FAM208A-205ENST00000477406 FOXD1Q16676 465 aa19.85■□□□□ 0.77
FAM208A-205ENST00000477406 MSH5O43196 834 aa18.63■□□□□ 0.57
FAM208A-205ENST00000477406 PIAS4Q8N2W9 510 aaPredicted RBP18.42■□□□□ 0.54
FAM208A-205ENST00000477406 PLPPR3Q6T4P5 718 aa18.36■□□□□ 0.53
FAM208A-205ENST00000477406 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
FAM208A-205ENST00000477406 ADRA2BP18089 450 aa18.22■□□□□ 0.51
FAM208A-205ENST00000477406 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
FAM208A-205ENST00000477406 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
FAM208A-205ENST00000477406 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
FAM208A-205ENST00000477406 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
FAM208A-205ENST00000477406 PPP4R3CPQ6ZMV5 832 aa16.07■□□□□ 0.16
FAM208A-205ENST00000477406 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
FAM208A-205ENST00000477406 HOXD11P31277 338 aaPredicted RBP16.02■□□□□ 0.16
FAM208A-205ENST00000477406 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
FAM208A-205ENST00000477406 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
FAM208A-205ENST00000477406 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
FAM208A-205ENST00000477406 C1QBPQ07021 282 aaKnown RBP15.63■□□□□ 0.09
FAM208A-205ENST00000477406 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
FAM208A-205ENST00000477406 POTEHQ6S545 545 aa15.37■□□□□ 0.05
FAM208A-205ENST00000477406 NCBP3Q53F19 620 aaKnown RBP15.29■□□□□ 0.04
FAM208A-205ENST00000477406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
FAM208A-205ENST00000477406 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
FAM208A-205ENST00000477406 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
FAM208A-205ENST00000477406 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
FAM208A-205ENST00000477406 DSG3P32926 999 aa14.79□□□□□ -0.04
FAM208A-205ENST00000477406 CAPN15O75808 1086 aa14.75□□□□□ -0.05
FAM208A-205ENST00000477406 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
FAM208A-205ENST00000477406 KCNA4P22459 653 aa14.57□□□□□ -0.08
FAM208A-205ENST00000477406 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
FAM208A-205ENST00000477406 ABCB7O75027 752 aa14.42□□□□□ -0.1
FAM208A-205ENST00000477406 ZNF219Q9P2Y4 722 aaPredicted RBP14.37□□□□□ -0.11
FAM208A-205ENST00000477406 APLP2Q06481 763 aa14.34□□□□□ -0.11
FAM208A-205ENST00000477406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
FAM208A-205ENST00000477406 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
FAM208A-205ENST00000477406 SAMD1Q6SPF0 538 aaPredicted RBP14.21□□□□□ -0.13
FAM208A-205ENST00000477406 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
FAM208A-205ENST00000477406 POLA2Q14181 598 aa13.99□□□□□ -0.17
FAM208A-205ENST00000477406 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
FAM208A-205ENST00000477406 SP7Q8TDD2 431 aaPredicted RBP13.95□□□□□ -0.18
FAM208A-205ENST00000477406 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
FAM208A-205ENST00000477406 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
FAM208A-205ENST00000477406 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
FAM208A-205ENST00000477406 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
FAM208A-205ENST00000477406 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
FAM208A-205ENST00000477406 ZBTB12Q9Y330 459 aaPredicted RBP13.62□□□□□ -0.23
FAM208A-205ENST00000477406 REM2Q8IYK8 340 aaPredicted RBP13.59□□□□□ -0.23
FAM208A-205ENST00000477406 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
FAM208A-205ENST00000477406 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
FAM208A-205ENST00000477406 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
FAM208A-205ENST00000477406 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
FAM208A-205ENST00000477406 ZBTB22O15209 634 aa13.44□□□□□ -0.26
FAM208A-205ENST00000477406 HAX1O00165 279 aa13.42□□□□□ -0.26
FAM208A-205ENST00000477406 FXR2P51116 673 aaKnown RBP eCLIP13.4□□□□□ -0.26
FAM208A-205ENST00000477406 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
FAM208A-205ENST00000477406 EVX2Q03828 476 aa13.25□□□□□ -0.29
FAM208A-205ENST00000477406 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
FAM208A-205ENST00000477406 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
FAM208A-205ENST00000477406 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
FAM208A-205ENST00000477406 FBLN2P98095 1184 aa13.14□□□□□ -0.31
FAM208A-205ENST00000477406 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
FAM208A-205ENST00000477406 CSRNP3Q8WYN3 585 aa13.12□□□□□ -0.31
FAM208A-205ENST00000477406 PLSCR2Q9NRY7 297 aa13.09□□□□□ -0.31
FAM208A-205ENST00000477406 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
FAM208A-205ENST00000477406 LHX8Q68G74 356 aa13.08□□□□□ -0.32
FAM208A-205ENST00000477406 SPDYE1Q8NFV5 336 aaPredicted RBP13.05□□□□□ -0.32
FAM208A-205ENST00000477406 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
FAM208A-205ENST00000477406 SSUH2Q9Y2M2 353 aa13.03□□□□□ -0.32
FAM208A-205ENST00000477406 C19orf67A6NJJ6 358 aa12.99□□□□□ -0.33
FAM208A-205ENST00000477406 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
FAM208A-205ENST00000477406 GABBR2O75899 941 aa12.88□□□□□ -0.35
FAM208A-205ENST00000477406 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
FAM208A-205ENST00000477406 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
FAM208A-205ENST00000477406 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
FAM208A-205ENST00000477406 POTEIP0CG38 1075 aa12.65□□□□□ -0.38
FAM208A-205ENST00000477406 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
FAM208A-205ENST00000477406 FARP1Q9Y4F1 1045 aaPredicted RBP12.64□□□□□ -0.39
FAM208A-205ENST00000477406 CLCN6P51797 869 aa12.46□□□□□ -0.41
FAM208A-205ENST00000477406 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
FAM208A-205ENST00000477406 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
FAM208A-205ENST00000477406 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
FAM208A-205ENST00000477406 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.42
FAM208A-205ENST00000477406 POTEMA6NI47 508 aa12.37□□□□□ -0.43
FAM208A-205ENST00000477406 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
FAM208A-205ENST00000477406 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
FAM208A-205ENST00000477406 POTEGQ6S5H5 508 aa12.3□□□□□ -0.44
FAM208A-205ENST00000477406 OTUD5Q96G74 571 aa12.26□□□□□ -0.45
FAM208A-205ENST00000477406 SPDYE4A6NLX3 237 aa12.25□□□□□ -0.45
FAM208A-205ENST00000477406 PHF12Q96QT6 1004 aa12.25□□□□□ -0.45
FAM208A-205ENST00000477406 POTEB2H3BUK9 544 aa12.23□□□□□ -0.45
FAM208A-205ENST00000477406 MNX1P50219 401 aaPredicted RBP12.2□□□□□ -0.46
FAM208A-205ENST00000477406 PCDH10Q9P2E7 1040 aa12.2□□□□□ -0.46
FAM208A-205ENST00000477406 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
FAM208A-205ENST00000477406 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
FAM208A-205ENST00000477406 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
FAM208A-205ENST00000477406 MS4A3Q96HJ5 214 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms