RNA–Protein interactions for RNA: ENST00000477389.1

GRIA3-202, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 3

Gene GRIA3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-202ENST00000477389 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
GRIA3-202ENST00000477389 CHIC1Q5VXU3 224 aa15.64■□□□□ 0.09
GRIA3-202ENST00000477389 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
GRIA3-202ENST00000477389 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
GRIA3-202ENST00000477389 FOXD1Q16676 465 aa12.95□□□□□ -0.34
GRIA3-202ENST00000477389 PLPPR3Q6T4P5 718 aa12.5□□□□□ -0.41
GRIA3-202ENST00000477389 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
GRIA3-202ENST00000477389 ADRA2BP18089 450 aa12.21□□□□□ -0.45
GRIA3-202ENST00000477389 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
GRIA3-202ENST00000477389 MSH5O43196 834 aa11.93□□□□□ -0.5
GRIA3-202ENST00000477389 POTEDQ86YR6 584 aa11.47□□□□□ -0.57
GRIA3-202ENST00000477389 MAPK8IP2Q13387 824 aaPredicted RBP11.2□□□□□ -0.62
GRIA3-202ENST00000477389 PPP4R3CPQ6ZMV5 832 aa11.03□□□□□ -0.64
GRIA3-202ENST00000477389 DMRT2Q9Y5R5 561 aa11.02□□□□□ -0.65
GRIA3-202ENST00000477389 SCAF1Q9H7N4 1312 aaKnown RBP11.01□□□□□ -0.65
GRIA3-202ENST00000477389 CNKSR2Q8WXI2 1034 aa10.75□□□□□ -0.69
GRIA3-202ENST00000477389 HOXD11P31277 338 aaPredicted RBP10.7□□□□□ -0.7
GRIA3-202ENST00000477389 RNF216Q9NWF9 866 aaPredicted RBP10.62□□□□□ -0.71
GRIA3-202ENST00000477389 NCBP3Q53F19 620 aaKnown RBP10.55□□□□□ -0.72
GRIA3-202ENST00000477389 NPM3O75607 178 aaKnown RBP10.53□□□□□ -0.72
GRIA3-202ENST00000477389 KCNA4P22459 653 aa10.49□□□□□ -0.73
GRIA3-202ENST00000477389 DCAF8L1A6NGE4 600 aa10.47□□□□□ -0.73
GRIA3-202ENST00000477389 RNF39Q9H2S5 420 aa10.27□□□□□ -0.77
GRIA3-202ENST00000477389 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
GRIA3-202ENST00000477389 CACNB1Q02641 598 aaPredicted RBP10.14□□□□□ -0.79
GRIA3-202ENST00000477389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.1□□□□□ -0.79
GRIA3-202ENST00000477389 C1QBPQ07021 282 aaKnown RBP10.07□□□□□ -0.8
GRIA3-202ENST00000477389 SLC4A2P04920 1241 aa10.06□□□□□ -0.8
GRIA3-202ENST00000477389 U3KPZ7 1027 aaPredicted RBP10.01□□□□□ -0.81
GRIA3-202ENST00000477389 SLC4A1APQ9BWU0 796 aaKnown RBP9.86□□□□□ -0.83
GRIA3-202ENST00000477389 SPINK5Q9NQ38 1064 aaPredicted RBP9.82□□□□□ -0.84
GRIA3-202ENST00000477389 ZBTB22O15209 634 aa9.71□□□□□ -0.86
GRIA3-202ENST00000477389 CAPN15O75808 1086 aa9.7□□□□□ -0.86
GRIA3-202ENST00000477389 DSG3P32926 999 aa9.68□□□□□ -0.86
GRIA3-202ENST00000477389 FOXD4L1Q9NU39 408 aa9.67□□□□□ -0.86
GRIA3-202ENST00000477389 MYCNP04198 464 aaPredicted RBP9.66□□□□□ -0.86
GRIA3-202ENST00000477389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.63□□□□□ -0.87
GRIA3-202ENST00000477389 HNRNPUL2Q1KMD3 747 aaKnown RBP9.63□□□□□ -0.87
GRIA3-202ENST00000477389 SAMD1Q6SPF0 538 aaPredicted RBP9.62□□□□□ -0.87
GRIA3-202ENST00000477389 TRHP20396 242 aaPredicted RBP9.6□□□□□ -0.87
GRIA3-202ENST00000477389 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
GRIA3-202ENST00000477389 APLP2Q06481 763 aa9.55□□□□□ -0.88
GRIA3-202ENST00000477389 ZNF219Q9P2Y4 722 aaPredicted RBP9.55□□□□□ -0.88
GRIA3-202ENST00000477389 ABCB7O75027 752 aa9.54□□□□□ -0.88
GRIA3-202ENST00000477389 POLA2Q14181 598 aa9.4□□□□□ -0.9
GRIA3-202ENST00000477389 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
GRIA3-202ENST00000477389 ATXN8OSP0DMR3 200 aa9.33□□□□□ -0.92
GRIA3-202ENST00000477389 EHMT2Q96KQ7 1210 aa9.27□□□□□ -0.93
GRIA3-202ENST00000477389 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
GRIA3-202ENST00000477389 ZBTB12Q9Y330 459 aaPredicted RBP9.12□□□□□ -0.95
GRIA3-202ENST00000477389 OSCARQ8IYS5 282 aa9.11□□□□□ -0.95
GRIA3-202ENST00000477389 RBM42Q9BTD8 480 aaKnown RBP9.11□□□□□ -0.95
GRIA3-202ENST00000477389 FBLN2P98095 1184 aa8.99□□□□□ -0.97
GRIA3-202ENST00000477389 AKT1S1Q96B36 256 aa8.99□□□□□ -0.97
GRIA3-202ENST00000477389 POTEHQ6S545 545 aa8.98□□□□□ -0.97
GRIA3-202ENST00000477389 REM2Q8IYK8 340 aaPredicted RBP8.95□□□□□ -0.98
GRIA3-202ENST00000477389 CHRDL2Q6WN34 429 aa8.92□□□□□ -0.98
GRIA3-202ENST00000477389 SPDYE2BA6NHP3 402 aa8.91□□□□□ -0.98
GRIA3-202ENST00000477389 SPDYE6P0CI01 402 aa8.91□□□□□ -0.98
GRIA3-202ENST00000477389 SPDYE2Q495Y8 402 aa8.91□□□□□ -0.98
GRIA3-202ENST00000477389 SSUH2Q9Y2M2 353 aa8.88□□□□□ -0.99
GRIA3-202ENST00000477389 PITPNM1O00562 1244 aa8.86□□□□□ -0.99
GRIA3-202ENST00000477389 ZNF692Q9BU19 519 aaPredicted RBP8.84□□□□□ -0.99
GRIA3-202ENST00000477389 PIP4P2Q8N4L2 257 aa8.78□□□□□ -1
GRIA3-202ENST00000477389 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
GRIA3-202ENST00000477389 PABPN1Q86U42 306 aaKnown RBP eCLIP8.74□□□□□ -1.01
GRIA3-202ENST00000477389 SPDYE1Q8NFV5 336 aaPredicted RBP8.7□□□□□ -1.02
GRIA3-202ENST00000477389 CLEC11AQ9Y240 323 aa8.69□□□□□ -1.02
GRIA3-202ENST00000477389 SPDYE4A6NLX3 237 aa8.67□□□□□ -1.02
GRIA3-202ENST00000477389 PRKAR2AP13861 404 aaKnown RBP8.6□□□□□ -1.03
GRIA3-202ENST00000477389 CHADLQ6NUI6 762 aa8.58□□□□□ -1.04
GRIA3-202ENST00000477389 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
GRIA3-202ENST00000477389 PROM2Q8N271 834 aa8.57□□□□□ -1.04
GRIA3-202ENST00000477389 EVX2Q03828 476 aa8.56□□□□□ -1.04
GRIA3-202ENST00000477389 HAX1O00165 279 aa8.51□□□□□ -1.05
GRIA3-202ENST00000477389 CREBZFQ9NS37 354 aa8.49□□□□□ -1.05
GRIA3-202ENST00000477389 SP7Q8TDD2 431 aaPredicted RBP8.48□□□□□ -1.05
GRIA3-202ENST00000477389 C19orf67A6NJJ6 358 aa8.47□□□□□ -1.05
GRIA3-202ENST00000477389 STAG3Q9UJ98 1225 aa8.46□□□□□ -1.06
GRIA3-202ENST00000477389 FARP1Q9Y4F1 1045 aaPredicted RBP8.44□□□□□ -1.06
GRIA3-202ENST00000477389 FKBP8Q14318 412 aa8.41□□□□□ -1.06
GRIA3-202ENST00000477389 MNX1P50219 401 aaPredicted RBP8.4□□□□□ -1.06
GRIA3-202ENST00000477389 CD44P16070 742 aaKnown RBP8.32□□□□□ -1.08
GRIA3-202ENST00000477389 GABBR2O75899 941 aa8.3□□□□□ -1.08
GRIA3-202ENST00000477389 ZRANB1Q9UGI0 708 aa8.23□□□□□ -1.09
GRIA3-202ENST00000477389 MIER1Q8N108 512 aa8.22□□□□□ -1.09
GRIA3-202ENST00000477389 ZNF579Q8NAF0 562 aaKnown RBP8.22□□□□□ -1.09
GRIA3-202ENST00000477389 NPM1P06748 294 aaKnown RBP eCLIP8.2□□□□□ -1.1
GRIA3-202ENST00000477389 POTEIP0CG38 1075 aa8.2□□□□□ -1.1
GRIA3-202ENST00000477389 PHF12Q96QT6 1004 aa8.18□□□□□ -1.1
GRIA3-202ENST00000477389 RASEFQ8IZ41 740 aa8.16□□□□□ -1.1
GRIA3-202ENST00000477389 GALR2O43603 387 aaPredicted RBP8.15□□□□□ -1.1
GRIA3-202ENST00000477389 PLCD3Q8N3E9 789 aa8.14□□□□□ -1.11
GRIA3-202ENST00000477389 NUBP1P53384 320 aa8.13□□□□□ -1.11
GRIA3-202ENST00000477389 CCDC61Q9Y6R9 512 aa8.13□□□□□ -1.11
GRIA3-202ENST00000477389 TSPYL2Q9H2G4 693 aaPredicted RBP8.12□□□□□ -1.11
GRIA3-202ENST00000477389 CLCN6P51797 869 aa8.11□□□□□ -1.11
GRIA3-202ENST00000477389 PAK3O75914 559 aaPredicted RBP8.1□□□□□ -1.11
GRIA3-202ENST00000477389 FBXO3Q9UK99 471 aa8.1□□□□□ -1.11
GRIA3-202ENST00000477389 PLEKHG5O94827 1062 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms