RNA–Protein interactions for RNA: ENST00000476912.1

MINDY3-205, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 2

Gene MINDY3, Length 469 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-205ENST00000476912 AEBP2Q6ZN18 517 aaPredicted RBP29.52■■■□□ 2.32
MINDY3-205ENST00000476912 CHIC1Q5VXU3 224 aa28.83■■■□□ 2.21
MINDY3-205ENST00000476912 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
MINDY3-205ENST00000476912 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
MINDY3-205ENST00000476912 PLPPR3Q6T4P5 718 aa23.38■■□□□ 1.33
MINDY3-205ENST00000476912 FOXD1Q16676 465 aa23.19■■□□□ 1.3
MINDY3-205ENST00000476912 PPP6R1Q9UPN7 881 aa22.4■■□□□ 1.18
MINDY3-205ENST00000476912 ADRA2BP18089 450 aa22.33■■□□□ 1.17
MINDY3-205ENST00000476912 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
MINDY3-205ENST00000476912 MSH5O43196 834 aa21.28■■□□□ 1
MINDY3-205ENST00000476912 PPP4R3CPQ6ZMV5 832 aa20.63■□□□□ 0.89
MINDY3-205ENST00000476912 POTEDQ86YR6 584 aa20.31■□□□□ 0.84
MINDY3-205ENST00000476912 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
MINDY3-205ENST00000476912 KCNA4P22459 653 aa20.26■□□□□ 0.83
MINDY3-205ENST00000476912 MAPK8IP2Q13387 824 aaPredicted RBP20.25■□□□□ 0.83
MINDY3-205ENST00000476912 CNKSR2Q8WXI2 1034 aa20.03■□□□□ 0.8
MINDY3-205ENST00000476912 NCBP3Q53F19 620 aaKnown RBP20.02■□□□□ 0.8
MINDY3-205ENST00000476912 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
MINDY3-205ENST00000476912 NPM3O75607 178 aaKnown RBP19.85■□□□□ 0.77
MINDY3-205ENST00000476912 RNF216Q9NWF9 866 aaPredicted RBP19.64■□□□□ 0.73
MINDY3-205ENST00000476912 HOXD11P31277 338 aaPredicted RBP19.59■□□□□ 0.73
MINDY3-205ENST00000476912 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
MINDY3-205ENST00000476912 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
MINDY3-205ENST00000476912 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
MINDY3-205ENST00000476912 SLC4A2P04920 1241 aa18.77■□□□□ 0.6
MINDY3-205ENST00000476912 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
MINDY3-205ENST00000476912 ZBTB22O15209 634 aa18.7■□□□□ 0.58
MINDY3-205ENST00000476912 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
MINDY3-205ENST00000476912 FOXD4L1Q9NU39 408 aa18.58■□□□□ 0.56
MINDY3-205ENST00000476912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.56
MINDY3-205ENST00000476912 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
MINDY3-205ENST00000476912 RNF39Q9H2S5 420 aa18.31■□□□□ 0.52
MINDY3-205ENST00000476912 MYCNP04198 464 aaPredicted RBP18.29■□□□□ 0.52
MINDY3-205ENST00000476912 C1QBPQ07021 282 aaKnown RBP18.04■□□□□ 0.48
MINDY3-205ENST00000476912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.02■□□□□ 0.48
MINDY3-205ENST00000476912 HNRNPUL2Q1KMD3 747 aaKnown RBP18.02■□□□□ 0.48
MINDY3-205ENST00000476912 SAMD1Q6SPF0 538 aaPredicted RBP17.99■□□□□ 0.47
MINDY3-205ENST00000476912 ATXN8OSP0DMR3 200 aa17.93■□□□□ 0.46
MINDY3-205ENST00000476912 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
MINDY3-205ENST00000476912 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
MINDY3-205ENST00000476912 APLP2Q06481 763 aa17.79■□□□□ 0.44
MINDY3-205ENST00000476912 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
MINDY3-205ENST00000476912 CAPN15O75808 1086 aa17.64■□□□□ 0.41
MINDY3-205ENST00000476912 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
MINDY3-205ENST00000476912 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
MINDY3-205ENST00000476912 DSG3P32926 999 aa17.44■□□□□ 0.38
MINDY3-205ENST00000476912 ABCB7O75027 752 aa17.36■□□□□ 0.37
MINDY3-205ENST00000476912 POLA2Q14181 598 aa17.35■□□□□ 0.37
MINDY3-205ENST00000476912 MKRN4PQ13434 485 aaPredicted RBP17.11■□□□□ 0.33
MINDY3-205ENST00000476912 ZBTB12Q9Y330 459 aaPredicted RBP17.02■□□□□ 0.32
MINDY3-205ENST00000476912 FBLN2P98095 1184 aa16.96■□□□□ 0.31
MINDY3-205ENST00000476912 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
MINDY3-205ENST00000476912 FKBP8Q14318 412 aa16.72■□□□□ 0.27
MINDY3-205ENST00000476912 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
MINDY3-205ENST00000476912 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
MINDY3-205ENST00000476912 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
MINDY3-205ENST00000476912 SPDYE2Q495Y8 402 aa16.62■□□□□ 0.25
MINDY3-205ENST00000476912 SSUH2Q9Y2M2 353 aa16.56■□□□□ 0.24
MINDY3-205ENST00000476912 PROM2Q8N271 834 aa16.52■□□□□ 0.24
MINDY3-205ENST00000476912 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
MINDY3-205ENST00000476912 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
MINDY3-205ENST00000476912 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
MINDY3-205ENST00000476912 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
MINDY3-205ENST00000476912 REM2Q8IYK8 340 aaPredicted RBP16.23■□□□□ 0.19
MINDY3-205ENST00000476912 SPDYE1Q8NFV5 336 aaPredicted RBP16.08■□□□□ 0.16
MINDY3-205ENST00000476912 PITPNM1O00562 1244 aa16.07■□□□□ 0.16
MINDY3-205ENST00000476912 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
MINDY3-205ENST00000476912 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
MINDY3-205ENST00000476912 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
MINDY3-205ENST00000476912 VASPP50552 380 aaPredicted RBP15.92■□□□□ 0.14
MINDY3-205ENST00000476912 POTEHQ6S545 545 aa15.9■□□□□ 0.14
MINDY3-205ENST00000476912 CHRDL2Q6WN34 429 aa15.86■□□□□ 0.13
MINDY3-205ENST00000476912 PRR29P0C7W0 189 aa15.85■□□□□ 0.13
MINDY3-205ENST00000476912 FXR2P51116 673 aaKnown RBP eCLIP15.77■□□□□ 0.12
MINDY3-205ENST00000476912 CREBZFQ9NS37 354 aa15.76■□□□□ 0.11
MINDY3-205ENST00000476912 IFNLR1Q8IU57 520 aaPredicted RBP15.75■□□□□ 0.11
MINDY3-205ENST00000476912 MIER1Q8N108 512 aa15.73■□□□□ 0.11
MINDY3-205ENST00000476912 PIP4P2Q8N4L2 257 aa15.7■□□□□ 0.1
MINDY3-205ENST00000476912 PLCD3Q8N3E9 789 aa15.69■□□□□ 0.1
MINDY3-205ENST00000476912 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
MINDY3-205ENST00000476912 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
MINDY3-205ENST00000476912 PRKAR2AP13861 404 aaKnown RBP15.62■□□□□ 0.09
MINDY3-205ENST00000476912 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
MINDY3-205ENST00000476912 ZBTB47Q9UFB7 747 aaPredicted RBP15.52■□□□□ 0.08
MINDY3-205ENST00000476912 KLHL34Q8N239 644 aa15.51■□□□□ 0.07
MINDY3-205ENST00000476912 FARP1Q9Y4F1 1045 aaPredicted RBP15.51■□□□□ 0.07
MINDY3-205ENST00000476912 SPOCK2Q92563 424 aa15.47■□□□□ 0.07
MINDY3-205ENST00000476912 NUBP1P53384 320 aa15.44■□□□□ 0.06
MINDY3-205ENST00000476912 NPM1P06748 294 aaKnown RBP eCLIP15.38■□□□□ 0.05
MINDY3-205ENST00000476912 RASEFQ8IZ41 740 aa15.35■□□□□ 0.05
MINDY3-205ENST00000476912 RTN4Q9NQC3 1192 aaKnown RBP15.35■□□□□ 0.05
MINDY3-205ENST00000476912 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
MINDY3-205ENST00000476912 PKD2Q13563 968 aa15.25■□□□□ 0.03
MINDY3-205ENST00000476912 C19orf67A6NJJ6 358 aa15.23■□□□□ 0.03
MINDY3-205ENST00000476912 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
MINDY3-205ENST00000476912 GSE1Q14687 1217 aa15.18■□□□□ 0.02
MINDY3-205ENST00000476912 CD44P16070 742 aaKnown RBP15.17■□□□□ 0.02
MINDY3-205ENST00000476912 DCAF8Q5TAQ9 597 aa15.17■□□□□ 0.02
MINDY3-205ENST00000476912 CIZ1Q9ULV3 898 aaPredicted RBP15.17■□□□□ 0.02
MINDY3-205ENST00000476912 TSPYL2Q9H2G4 693 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms