RNA–Protein interactions for RNA: ENST00000476511.1

ZC3H6-203, Transcript of zinc finger CCCH-type containing 6, humanhuman

TSL 3

Gene ZC3H6, Length 963 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6-203ENST00000476511 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
ZC3H6-203ENST00000476511 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
ZC3H6-203ENST00000476511 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
ZC3H6-203ENST00000476511 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
ZC3H6-203ENST00000476511 FOXD1Q16676 465 aa20.37■□□□□ 0.85
ZC3H6-203ENST00000476511 POTEDQ86YR6 584 aa20.02■□□□□ 0.8
ZC3H6-203ENST00000476511 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
ZC3H6-203ENST00000476511 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
ZC3H6-203ENST00000476511 ADRA2BP18089 450 aa19.07■□□□□ 0.64
ZC3H6-203ENST00000476511 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
ZC3H6-203ENST00000476511 MSH5O43196 834 aa18.94■□□□□ 0.62
ZC3H6-203ENST00000476511 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
ZC3H6-203ENST00000476511 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
ZC3H6-203ENST00000476511 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
ZC3H6-203ENST00000476511 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
ZC3H6-203ENST00000476511 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
ZC3H6-203ENST00000476511 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
ZC3H6-203ENST00000476511 HOXD11P31277 338 aaPredicted RBP16.67■□□□□ 0.26
ZC3H6-203ENST00000476511 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
ZC3H6-203ENST00000476511 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
ZC3H6-203ENST00000476511 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
ZC3H6-203ENST00000476511 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
ZC3H6-203ENST00000476511 RNF39Q9H2S5 420 aa16.22■□□□□ 0.19
ZC3H6-203ENST00000476511 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
ZC3H6-203ENST00000476511 KCNA4P22459 653 aa15.98■□□□□ 0.15
ZC3H6-203ENST00000476511 C1QBPQ07021 282 aaKnown RBP15.94■□□□□ 0.14
ZC3H6-203ENST00000476511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
ZC3H6-203ENST00000476511 U3KPZ7 1027 aaPredicted RBP15.6■□□□□ 0.09
ZC3H6-203ENST00000476511 POTEHQ6S545 545 aa15.53■□□□□ 0.08
ZC3H6-203ENST00000476511 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
ZC3H6-203ENST00000476511 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
ZC3H6-203ENST00000476511 CAPN15O75808 1086 aa15.32■□□□□ 0.04
ZC3H6-203ENST00000476511 DSG3P32926 999 aa15.23■□□□□ 0.03
ZC3H6-203ENST00000476511 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
ZC3H6-203ENST00000476511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.04■□□□□ -0
ZC3H6-203ENST00000476511 HNRNPUL2Q1KMD3 747 aaKnown RBP15.04■□□□□ -0
ZC3H6-203ENST00000476511 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
ZC3H6-203ENST00000476511 ABCB7O75027 752 aa15.02■□□□□ -0
ZC3H6-203ENST00000476511 APLP2Q06481 763 aa15.02■□□□□ -0
ZC3H6-203ENST00000476511 SAMD1Q6SPF0 538 aaPredicted RBP14.99□□□□□ -0.01
ZC3H6-203ENST00000476511 ZNF219Q9P2Y4 722 aaPredicted RBP14.99□□□□□ -0.01
ZC3H6-203ENST00000476511 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
ZC3H6-203ENST00000476511 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
ZC3H6-203ENST00000476511 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
ZC3H6-203ENST00000476511 ZBTB22O15209 634 aa14.71□□□□□ -0.05
ZC3H6-203ENST00000476511 POLA2Q14181 598 aa14.7□□□□□ -0.06
ZC3H6-203ENST00000476511 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
ZC3H6-203ENST00000476511 ATXN8OSP0DMR3 200 aa14.32□□□□□ -0.12
ZC3H6-203ENST00000476511 ZBTB12Q9Y330 459 aaPredicted RBP14.28□□□□□ -0.12
ZC3H6-203ENST00000476511 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
ZC3H6-203ENST00000476511 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
ZC3H6-203ENST00000476511 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
ZC3H6-203ENST00000476511 SP7Q8TDD2 431 aaPredicted RBP14.12□□□□□ -0.15
ZC3H6-203ENST00000476511 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
ZC3H6-203ENST00000476511 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
ZC3H6-203ENST00000476511 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
ZC3H6-203ENST00000476511 FBLN2P98095 1184 aa14□□□□□ -0.17
ZC3H6-203ENST00000476511 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
ZC3H6-203ENST00000476511 SPDYE2BA6NHP3 402 aa13.9□□□□□ -0.18
ZC3H6-203ENST00000476511 SPDYE6P0CI01 402 aa13.9□□□□□ -0.18
ZC3H6-203ENST00000476511 SPDYE2Q495Y8 402 aa13.9□□□□□ -0.18
ZC3H6-203ENST00000476511 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
ZC3H6-203ENST00000476511 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
ZC3H6-203ENST00000476511 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
ZC3H6-203ENST00000476511 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
ZC3H6-203ENST00000476511 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
ZC3H6-203ENST00000476511 HAX1O00165 279 aa13.7□□□□□ -0.22
ZC3H6-203ENST00000476511 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
ZC3H6-203ENST00000476511 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
ZC3H6-203ENST00000476511 PABPN1Q86U42 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
ZC3H6-203ENST00000476511 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
ZC3H6-203ENST00000476511 EVX2Q03828 476 aa13.52□□□□□ -0.25
ZC3H6-203ENST00000476511 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
ZC3H6-203ENST00000476511 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
ZC3H6-203ENST00000476511 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
ZC3H6-203ENST00000476511 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
ZC3H6-203ENST00000476511 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
ZC3H6-203ENST00000476511 LHX8Q68G74 356 aa13.25□□□□□ -0.29
ZC3H6-203ENST00000476511 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.29
ZC3H6-203ENST00000476511 GABBR2O75899 941 aa13.15□□□□□ -0.3
ZC3H6-203ENST00000476511 CREBZFQ9NS37 354 aa13.15□□□□□ -0.3
ZC3H6-203ENST00000476511 STAG3Q9UJ98 1225 aa13.15□□□□□ -0.3
ZC3H6-203ENST00000476511 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
ZC3H6-203ENST00000476511 PROM2Q8N271 834 aa12.99□□□□□ -0.33
ZC3H6-203ENST00000476511 ZRANB1Q9UGI0 708 aa12.95□□□□□ -0.34
ZC3H6-203ENST00000476511 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
ZC3H6-203ENST00000476511 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
ZC3H6-203ENST00000476511 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
ZC3H6-203ENST00000476511 NPM1P06748 294 aaKnown RBP eCLIP12.83□□□□□ -0.36
ZC3H6-203ENST00000476511 CLCN6P51797 869 aa12.81□□□□□ -0.36
ZC3H6-203ENST00000476511 PHF12Q96QT6 1004 aa12.81□□□□□ -0.36
ZC3H6-203ENST00000476511 GALR2O43603 387 aaPredicted RBP12.8□□□□□ -0.36
ZC3H6-203ENST00000476511 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.37
ZC3H6-203ENST00000476511 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
ZC3H6-203ENST00000476511 FKBP8Q14318 412 aa12.73□□□□□ -0.37
ZC3H6-203ENST00000476511 MIER1Q8N108 512 aa12.71□□□□□ -0.37
ZC3H6-203ENST00000476511 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
ZC3H6-203ENST00000476511 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
ZC3H6-203ENST00000476511 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
ZC3H6-203ENST00000476511 PLCD3Q8N3E9 789 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms