RNA–Protein interactions for RNA: ENST00000476458.1

CARMIL1-203, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 5

Gene CARMIL1, Length 1,291 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-203ENST00000476458 AEBP2Q6ZN18 517 aaPredicted RBP36.54■■■■□ 3.44
CARMIL1-203ENST00000476458 CHIC1Q5VXU3 224 aa35.91■■■■□ 3.34
CARMIL1-203ENST00000476458 PHF23Q9BUL5 403 aaPredicted RBP31.53■■■□□ 2.64
CARMIL1-203ENST00000476458 SENP3Q9H4L4 574 aaPredicted RBP31.12■■■□□ 2.57
CARMIL1-203ENST00000476458 PLPPR3Q6T4P5 718 aa29.29■■■□□ 2.28
CARMIL1-203ENST00000476458 FOXD1Q16676 465 aa28.78■■■□□ 2.2
CARMIL1-203ENST00000476458 ADRA2BP18089 450 aa27.78■■■□□ 2.04
CARMIL1-203ENST00000476458 PPP6R1Q9UPN7 881 aa27.77■■■□□ 2.04
CARMIL1-203ENST00000476458 PIAS4Q8N2W9 510 aaPredicted RBP27.23■■□□□ 1.95
CARMIL1-203ENST00000476458 MSH5O43196 834 aa26.59■■□□□ 1.85
CARMIL1-203ENST00000476458 PPP4R3CPQ6ZMV5 832 aa25.78■■□□□ 1.72
CARMIL1-203ENST00000476458 SCAF1Q9H7N4 1312 aaKnown RBP25.58■■□□□ 1.69
CARMIL1-203ENST00000476458 KCNA4P22459 653 aa25.31■■□□□ 1.64
CARMIL1-203ENST00000476458 NCBP3Q53F19 620 aaKnown RBP25.25■■□□□ 1.63
CARMIL1-203ENST00000476458 MAPK8IP2Q13387 824 aaPredicted RBP25.14■■□□□ 1.62
CARMIL1-203ENST00000476458 CNKSR2Q8WXI2 1034 aa25.07■■□□□ 1.6
CARMIL1-203ENST00000476458 DMRT2Q9Y5R5 561 aa24.83■■□□□ 1.57
CARMIL1-203ENST00000476458 NPM3O75607 178 aaKnown RBP24.76■■□□□ 1.55
CARMIL1-203ENST00000476458 RNF216Q9NWF9 866 aaPredicted RBP24.54■■□□□ 1.52
CARMIL1-203ENST00000476458 HOXD11P31277 338 aaPredicted RBP24.36■■□□□ 1.49
CARMIL1-203ENST00000476458 SLC4A1APQ9BWU0 796 aaKnown RBP24.19■■□□□ 1.46
CARMIL1-203ENST00000476458 DNAJC5BQ9UF47 199 aa24.07■■□□□ 1.44
CARMIL1-203ENST00000476458 POTEDQ86YR6 584 aa23.86■■□□□ 1.41
CARMIL1-203ENST00000476458 DCAF8L1A6NGE4 600 aa23.78■■□□□ 1.4
CARMIL1-203ENST00000476458 EHMT2Q96KQ7 1210 aa23.64■■□□□ 1.37
CARMIL1-203ENST00000476458 FOXD4L1Q9NU39 408 aa23.31■■□□□ 1.32
CARMIL1-203ENST00000476458 SLC4A2P04920 1241 aa23.3■■□□□ 1.32
CARMIL1-203ENST00000476458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.32
CARMIL1-203ENST00000476458 CSRNP3Q8WYN3 585 aa23.27■■□□□ 1.32
CARMIL1-203ENST00000476458 ZBTB22O15209 634 aa23.24■■□□□ 1.31
CARMIL1-203ENST00000476458 MYCNP04198 464 aaPredicted RBP22.94■■□□□ 1.26
CARMIL1-203ENST00000476458 U3KPZ7 1027 aaPredicted RBP22.83■■□□□ 1.25
CARMIL1-203ENST00000476458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
CARMIL1-203ENST00000476458 HNRNPUL2Q1KMD3 747 aaKnown RBP22.75■■□□□ 1.23
CARMIL1-203ENST00000476458 RNF39Q9H2S5 420 aa22.73■■□□□ 1.23
CARMIL1-203ENST00000476458 SAMD1Q6SPF0 538 aaPredicted RBP22.64■■□□□ 1.21
CARMIL1-203ENST00000476458 ATXN8OSP0DMR3 200 aa22.54■■□□□ 1.2
CARMIL1-203ENST00000476458 C1QBPQ07021 282 aaKnown RBP22.53■■□□□ 1.2
CARMIL1-203ENST00000476458 APLP2Q06481 763 aa22.51■■□□□ 1.19
CARMIL1-203ENST00000476458 ATF5Q9Y2D1 282 aaPredicted RBP22.2■■□□□ 1.14
CARMIL1-203ENST00000476458 SPINK5Q9NQ38 1064 aaPredicted RBP22.14■■□□□ 1.13
CARMIL1-203ENST00000476458 CAPN15O75808 1086 aa22.12■■□□□ 1.13
CARMIL1-203ENST00000476458 ZNF219Q9P2Y4 722 aaPredicted RBP22.1■■□□□ 1.13
CARMIL1-203ENST00000476458 CACNB1Q02641 598 aaPredicted RBP22.08■■□□□ 1.13
CARMIL1-203ENST00000476458 TRHP20396 242 aaPredicted RBP22.04■■□□□ 1.12
CARMIL1-203ENST00000476458 POLA2Q14181 598 aa21.71■■□□□ 1.07
CARMIL1-203ENST00000476458 DSG3P32926 999 aa21.67■■□□□ 1.06
CARMIL1-203ENST00000476458 ABCB7O75027 752 aa21.66■■□□□ 1.06
CARMIL1-203ENST00000476458 ZBTB12Q9Y330 459 aaPredicted RBP21.47■■□□□ 1.03
CARMIL1-203ENST00000476458 FBLN2P98095 1184 aa21.42■■□□□ 1.02
CARMIL1-203ENST00000476458 MKRN4PQ13434 485 aaPredicted RBP21.25■□□□□ 0.99
CARMIL1-203ENST00000476458 FKBP8Q14318 412 aa21.07■□□□□ 0.96
CARMIL1-203ENST00000476458 SPDYE4A6NLX3 237 aa20.94■□□□□ 0.94
CARMIL1-203ENST00000476458 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
CARMIL1-203ENST00000476458 SPDYE2BA6NHP3 402 aa20.84■□□□□ 0.93
CARMIL1-203ENST00000476458 SPDYE6P0CI01 402 aa20.84■□□□□ 0.93
CARMIL1-203ENST00000476458 SPDYE2Q495Y8 402 aa20.84■□□□□ 0.93
CARMIL1-203ENST00000476458 ZNF692Q9BU19 519 aaPredicted RBP20.78■□□□□ 0.92
CARMIL1-203ENST00000476458 RBM42Q9BTD8 480 aaKnown RBP20.75■□□□□ 0.91
CARMIL1-203ENST00000476458 SSUH2Q9Y2M2 353 aa20.64■□□□□ 0.89
CARMIL1-203ENST00000476458 PROM2Q8N271 834 aa20.57■□□□□ 0.88
CARMIL1-203ENST00000476458 AKT1S1Q96B36 256 aa20.49■□□□□ 0.87
CARMIL1-203ENST00000476458 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
CARMIL1-203ENST00000476458 FBXO3Q9UK99 471 aa20.39■□□□□ 0.85
CARMIL1-203ENST00000476458 REM2Q8IYK8 340 aaPredicted RBP20.26■□□□□ 0.83
CARMIL1-203ENST00000476458 STAG3Q9UJ98 1225 aa20.26■□□□□ 0.83
CARMIL1-203ENST00000476458 SPDYE1Q8NFV5 336 aaPredicted RBP20.21■□□□□ 0.83
CARMIL1-203ENST00000476458 CLEC11AQ9Y240 323 aa20.08■□□□□ 0.81
CARMIL1-203ENST00000476458 VASPP50552 380 aaPredicted RBP20.02■□□□□ 0.8
CARMIL1-203ENST00000476458 PITPNM1O00562 1244 aa20■□□□□ 0.79
CARMIL1-203ENST00000476458 PRR29P0C7W0 189 aa19.94■□□□□ 0.78
CARMIL1-203ENST00000476458 MIER1Q8N108 512 aa19.87■□□□□ 0.77
CARMIL1-203ENST00000476458 PLCD3Q8N3E9 789 aa19.87■□□□□ 0.77
CARMIL1-203ENST00000476458 PLEKHG5O94827 1062 aa19.86■□□□□ 0.77
CARMIL1-203ENST00000476458 CHRDL2Q6WN34 429 aa19.76■□□□□ 0.75
CARMIL1-203ENST00000476458 IFNLR1Q8IU57 520 aaPredicted RBP19.72■□□□□ 0.75
CARMIL1-203ENST00000476458 KLHL34Q8N239 644 aa19.7■□□□□ 0.74
CARMIL1-203ENST00000476458 ZBTB47Q9UFB7 747 aaPredicted RBP19.7■□□□□ 0.74
CARMIL1-203ENST00000476458 CREBZFQ9NS37 354 aa19.65■□□□□ 0.74
CARMIL1-203ENST00000476458 FXR2P51116 673 aaKnown RBP eCLIP19.61■□□□□ 0.73
CARMIL1-203ENST00000476458 PRKAR2AP13861 404 aaKnown RBP19.53■□□□□ 0.72
CARMIL1-203ENST00000476458 SPOCK2Q92563 424 aa19.53■□□□□ 0.72
CARMIL1-203ENST00000476458 AMER1Q5JTC6 1135 aaPredicted RBP19.52■□□□□ 0.72
CARMIL1-203ENST00000476458 PIP4P2Q8N4L2 257 aa19.52■□□□□ 0.72
CARMIL1-203ENST00000476458 CHADLQ6NUI6 762 aa19.5■□□□□ 0.71
CARMIL1-203ENST00000476458 NPM1P06748 294 aaKnown RBP eCLIP19.45■□□□□ 0.7
CARMIL1-203ENST00000476458 MNX1P50219 401 aaPredicted RBP19.44■□□□□ 0.7
CARMIL1-203ENST00000476458 FARP1Q9Y4F1 1045 aaPredicted RBP19.39■□□□□ 0.69
CARMIL1-203ENST00000476458 RTN4Q9NQC3 1192 aaKnown RBP19.35■□□□□ 0.69
CARMIL1-203ENST00000476458 NUBP1P53384 320 aa19.28■□□□□ 0.68
CARMIL1-203ENST00000476458 GSE1Q14687 1217 aa19.2■□□□□ 0.66
CARMIL1-203ENST00000476458 FAM212AQ96EL1 285 aa19.2■□□□□ 0.66
CARMIL1-203ENST00000476458 CIZ1Q9ULV3 898 aaPredicted RBP19.2■□□□□ 0.66
CARMIL1-203ENST00000476458 DCAF8Q5TAQ9 597 aa19.16■□□□□ 0.66
CARMIL1-203ENST00000476458 RASEFQ8IZ41 740 aa19.15■□□□□ 0.66
CARMIL1-203ENST00000476458 PKD2Q13563 968 aa19.1■□□□□ 0.65
CARMIL1-203ENST00000476458 PAK3O75914 559 aaPredicted RBP19.09■□□□□ 0.65
CARMIL1-203ENST00000476458 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
CARMIL1-203ENST00000476458 TSPYL2Q9H2G4 693 aaPredicted RBP19.05■□□□□ 0.64
CARMIL1-203ENST00000476458 ECM2O94769 699 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms