RNA–Protein interactions for RNA: ENST00000476345.1

RNF216-207, Transcript of ring finger protein 216, humanhuman

TSL 5

Gene RNF216, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216-207ENST00000476345 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
RNF216-207ENST00000476345 AEBP2Q6ZN18 517 aaPredicted RBP24.68■■□□□ 1.54
RNF216-207ENST00000476345 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
RNF216-207ENST00000476345 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
RNF216-207ENST00000476345 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
RNF216-207ENST00000476345 FOXD1Q16676 465 aa19.25■□□□□ 0.67
RNF216-207ENST00000476345 ADRA2BP18089 450 aa19.06■□□□□ 0.64
RNF216-207ENST00000476345 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
RNF216-207ENST00000476345 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
RNF216-207ENST00000476345 KCNA4P22459 653 aa18.3■□□□□ 0.52
RNF216-207ENST00000476345 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
RNF216-207ENST00000476345 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
RNF216-207ENST00000476345 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
RNF216-207ENST00000476345 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
RNF216-207ENST00000476345 MSH5O43196 834 aa17.47■□□□□ 0.39
RNF216-207ENST00000476345 NPM3O75607 178 aaKnown RBP17.45■□□□□ 0.38
RNF216-207ENST00000476345 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
RNF216-207ENST00000476345 CNKSR2Q8WXI2 1034 aa17.33■□□□□ 0.36
RNF216-207ENST00000476345 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
RNF216-207ENST00000476345 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
RNF216-207ENST00000476345 ZBTB22O15209 634 aa16.87■□□□□ 0.29
RNF216-207ENST00000476345 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
RNF216-207ENST00000476345 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
RNF216-207ENST00000476345 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
RNF216-207ENST00000476345 FOXD4L1Q9NU39 408 aa16.65■□□□□ 0.26
RNF216-207ENST00000476345 HOXD11P31277 338 aaPredicted RBP16.61■□□□□ 0.25
RNF216-207ENST00000476345 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
RNF216-207ENST00000476345 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
RNF216-207ENST00000476345 DCAF8L1A6NGE4 600 aa15.98■□□□□ 0.15
RNF216-207ENST00000476345 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
RNF216-207ENST00000476345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.12
RNF216-207ENST00000476345 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
RNF216-207ENST00000476345 ATF5Q9Y2D1 282 aaPredicted RBP15.65■□□□□ 0.1
RNF216-207ENST00000476345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
RNF216-207ENST00000476345 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
RNF216-207ENST00000476345 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
RNF216-207ENST00000476345 FKBP8Q14318 412 aa15.57■□□□□ 0.08
RNF216-207ENST00000476345 APLP2Q06481 763 aa15.31■□□□□ 0.04
RNF216-207ENST00000476345 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
RNF216-207ENST00000476345 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
RNF216-207ENST00000476345 AMER1Q5JTC6 1135 aaPredicted RBP15.27■□□□□ 0.04
RNF216-207ENST00000476345 SLC24A1O60721 1099 aa15.09■□□□□ 0.01
RNF216-207ENST00000476345 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
RNF216-207ENST00000476345 RNF39Q9H2S5 420 aa15.05■□□□□ -0
RNF216-207ENST00000476345 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
RNF216-207ENST00000476345 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
RNF216-207ENST00000476345 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
RNF216-207ENST00000476345 CAPN15O75808 1086 aa14.95□□□□□ -0.02
RNF216-207ENST00000476345 POLA2Q14181 598 aa14.92□□□□□ -0.02
RNF216-207ENST00000476345 FBLN2P98095 1184 aa14.91□□□□□ -0.02
RNF216-207ENST00000476345 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
RNF216-207ENST00000476345 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
RNF216-207ENST00000476345 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
RNF216-207ENST00000476345 PROM2Q8N271 834 aa14.79□□□□□ -0.04
RNF216-207ENST00000476345 ABCB7O75027 752 aa14.75□□□□□ -0.05
RNF216-207ENST00000476345 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
RNF216-207ENST00000476345 VASPP50552 380 aaPredicted RBP14.62□□□□□ -0.07
RNF216-207ENST00000476345 DSG3P32926 999 aa14.54□□□□□ -0.08
RNF216-207ENST00000476345 IFNLR1Q8IU57 520 aaPredicted RBP14.48□□□□□ -0.09
RNF216-207ENST00000476345 OSCARQ8IYS5 282 aa14.42□□□□□ -0.1
RNF216-207ENST00000476345 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
RNF216-207ENST00000476345 SPDYE2BA6NHP3 402 aa14.36□□□□□ -0.11
RNF216-207ENST00000476345 SPDYE6P0CI01 402 aa14.36□□□□□ -0.11
RNF216-207ENST00000476345 SPDYE2Q495Y8 402 aa14.36□□□□□ -0.11
RNF216-207ENST00000476345 SSUH2Q9Y2M2 353 aa14.33□□□□□ -0.12
RNF216-207ENST00000476345 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
RNF216-207ENST00000476345 STAG3Q9UJ98 1225 aa14.25□□□□□ -0.13
RNF216-207ENST00000476345 PKD2Q13563 968 aa14.24□□□□□ -0.13
RNF216-207ENST00000476345 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
RNF216-207ENST00000476345 CACNB1Q02641 598 aaPredicted RBP14.21□□□□□ -0.13
RNF216-207ENST00000476345 DCAF8L2P0C7V8 631 aa14.18□□□□□ -0.14
RNF216-207ENST00000476345 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
RNF216-207ENST00000476345 PLCD3Q8N3E9 789 aa14.16□□□□□ -0.14
RNF216-207ENST00000476345 PLCB2Q00722 1185 aa14.11□□□□□ -0.15
RNF216-207ENST00000476345 MIER1Q8N108 512 aa14.1□□□□□ -0.15
RNF216-207ENST00000476345 ECM2O94769 699 aaPredicted RBP14.03□□□□□ -0.16
RNF216-207ENST00000476345 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
RNF216-207ENST00000476345 HAP1P54257 671 aaPredicted RBP13.92□□□□□ -0.18
RNF216-207ENST00000476345 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
RNF216-207ENST00000476345 RGL2O15211 777 aa13.89□□□□□ -0.19
RNF216-207ENST00000476345 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
RNF216-207ENST00000476345 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
RNF216-207ENST00000476345 BBXQ8WY36 941 aaPredicted RBP13.83□□□□□ -0.2
RNF216-207ENST00000476345 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
RNF216-207ENST00000476345 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.8□□□□□ -0.2
RNF216-207ENST00000476345 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
RNF216-207ENST00000476345 AKT1S1Q96B36 256 aa13.79□□□□□ -0.2
RNF216-207ENST00000476345 PAXIP1Q6ZW49 1069 aaPredicted RBP13.73□□□□□ -0.21
RNF216-207ENST00000476345 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
RNF216-207ENST00000476345 CLEC11AQ9Y240 323 aa13.72□□□□□ -0.21
RNF216-207ENST00000476345 CFAP44Q96MT7 982 aa13.7□□□□□ -0.22
RNF216-207ENST00000476345 NUBP1P53384 320 aa13.69□□□□□ -0.22
RNF216-207ENST00000476345 VSIG10Q8N0Z9 540 aa13.69□□□□□ -0.22
RNF216-207ENST00000476345 GSE1Q14687 1217 aa13.68□□□□□ -0.22
RNF216-207ENST00000476345 CHGAP10645 457 aaKnown RBP13.67□□□□□ -0.22
RNF216-207ENST00000476345 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
RNF216-207ENST00000476345 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
RNF216-207ENST00000476345 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
RNF216-207ENST00000476345 SPRYD3Q8NCJ5 442 aa13.61□□□□□ -0.23
RNF216-207ENST00000476345 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms