RNA–Protein interactions for RNA: ENST00000476314.1

SYCP2-209, Transcript of synaptonemal complex protein 2, humanhuman

TSL 2

Gene SYCP2, Length 584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP2-209ENST00000476314 AEBP2Q6ZN18 517 aaPredicted RBP24.12■■□□□ 1.45
SYCP2-209ENST00000476314 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
SYCP2-209ENST00000476314 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
SYCP2-209ENST00000476314 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
SYCP2-209ENST00000476314 FOXD1Q16676 465 aa19.33■□□□□ 0.68
SYCP2-209ENST00000476314 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
SYCP2-209ENST00000476314 PLPPR3Q6T4P5 718 aa18.5■□□□□ 0.55
SYCP2-209ENST00000476314 MSH5O43196 834 aa18.2■□□□□ 0.5
SYCP2-209ENST00000476314 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
SYCP2-209ENST00000476314 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
SYCP2-209ENST00000476314 ADRA2BP18089 450 aa17.84■□□□□ 0.45
SYCP2-209ENST00000476314 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
SYCP2-209ENST00000476314 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
SYCP2-209ENST00000476314 PPP4R3CPQ6ZMV5 832 aa16.25■□□□□ 0.19
SYCP2-209ENST00000476314 DMRT2Q9Y5R5 561 aa16.22■□□□□ 0.19
SYCP2-209ENST00000476314 CACNB1Q02641 598 aaPredicted RBP16.1■□□□□ 0.17
SYCP2-209ENST00000476314 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
SYCP2-209ENST00000476314 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
SYCP2-209ENST00000476314 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
SYCP2-209ENST00000476314 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
SYCP2-209ENST00000476314 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
SYCP2-209ENST00000476314 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
SYCP2-209ENST00000476314 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
SYCP2-209ENST00000476314 KCNA4P22459 653 aa15.5■□□□□ 0.07
SYCP2-209ENST00000476314 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
SYCP2-209ENST00000476314 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
SYCP2-209ENST00000476314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.03
SYCP2-209ENST00000476314 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
SYCP2-209ENST00000476314 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
SYCP2-209ENST00000476314 POTEHQ6S545 545 aa14.68□□□□□ -0.06
SYCP2-209ENST00000476314 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
SYCP2-209ENST00000476314 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
SYCP2-209ENST00000476314 DSG3P32926 999 aa14.37□□□□□ -0.11
SYCP2-209ENST00000476314 CAPN15O75808 1086 aa14.36□□□□□ -0.11
SYCP2-209ENST00000476314 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
SYCP2-209ENST00000476314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
SYCP2-209ENST00000476314 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
SYCP2-209ENST00000476314 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
SYCP2-209ENST00000476314 ZBTB22O15209 634 aa14.32□□□□□ -0.12
SYCP2-209ENST00000476314 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
SYCP2-209ENST00000476314 APLP2Q06481 763 aa14.23□□□□□ -0.13
SYCP2-209ENST00000476314 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
SYCP2-209ENST00000476314 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
SYCP2-209ENST00000476314 ABCB7O75027 752 aa14.02□□□□□ -0.17
SYCP2-209ENST00000476314 ATF5Q9Y2D1 282 aaPredicted RBP14□□□□□ -0.17
SYCP2-209ENST00000476314 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
SYCP2-209ENST00000476314 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
SYCP2-209ENST00000476314 POLA2Q14181 598 aa13.81□□□□□ -0.2
SYCP2-209ENST00000476314 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
SYCP2-209ENST00000476314 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
SYCP2-209ENST00000476314 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
SYCP2-209ENST00000476314 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
SYCP2-209ENST00000476314 SP7Q8TDD2 431 aaPredicted RBP13.46□□□□□ -0.25
SYCP2-209ENST00000476314 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
SYCP2-209ENST00000476314 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
SYCP2-209ENST00000476314 FBLN2P98095 1184 aa13.34□□□□□ -0.27
SYCP2-209ENST00000476314 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
SYCP2-209ENST00000476314 PIP4P2Q8N4L2 257 aa13.23□□□□□ -0.29
SYCP2-209ENST00000476314 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
SYCP2-209ENST00000476314 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
SYCP2-209ENST00000476314 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
SYCP2-209ENST00000476314 HAX1O00165 279 aa13.18□□□□□ -0.3
SYCP2-209ENST00000476314 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
SYCP2-209ENST00000476314 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
SYCP2-209ENST00000476314 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
SYCP2-209ENST00000476314 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
SYCP2-209ENST00000476314 EVX2Q03828 476 aa13.02□□□□□ -0.33
SYCP2-209ENST00000476314 FXR2P51116 673 aaKnown RBP eCLIP12.99□□□□□ -0.33
SYCP2-209ENST00000476314 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
SYCP2-209ENST00000476314 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
SYCP2-209ENST00000476314 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
SYCP2-209ENST00000476314 PROM2Q8N271 834 aa12.76□□□□□ -0.37
SYCP2-209ENST00000476314 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
SYCP2-209ENST00000476314 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
SYCP2-209ENST00000476314 LHX8Q68G74 356 aa12.64□□□□□ -0.39
SYCP2-209ENST00000476314 GABBR2O75899 941 aa12.63□□□□□ -0.39
SYCP2-209ENST00000476314 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
SYCP2-209ENST00000476314 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
SYCP2-209ENST00000476314 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
SYCP2-209ENST00000476314 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
SYCP2-209ENST00000476314 FKBP8Q14318 412 aa12.51□□□□□ -0.41
SYCP2-209ENST00000476314 CREBZFQ9NS37 354 aa12.48□□□□□ -0.41
SYCP2-209ENST00000476314 PLSCR2Q9NRY7 297 aa12.44□□□□□ -0.42
SYCP2-209ENST00000476314 FARP1Q9Y4F1 1045 aaPredicted RBP12.42□□□□□ -0.42
SYCP2-209ENST00000476314 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
SYCP2-209ENST00000476314 MNX1P50219 401 aaPredicted RBP12.37□□□□□ -0.43
SYCP2-209ENST00000476314 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
SYCP2-209ENST00000476314 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
SYCP2-209ENST00000476314 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
SYCP2-209ENST00000476314 MIER1Q8N108 512 aa12.15□□□□□ -0.46
SYCP2-209ENST00000476314 DCBLD2Q96PD2 775 aa12.15□□□□□ -0.46
SYCP2-209ENST00000476314 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
SYCP2-209ENST00000476314 PLEKHG5O94827 1062 aa12.09□□□□□ -0.47
SYCP2-209ENST00000476314 CLCN6P51797 869 aa12.08□□□□□ -0.48
SYCP2-209ENST00000476314 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
SYCP2-209ENST00000476314 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
SYCP2-209ENST00000476314 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
SYCP2-209ENST00000476314 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
SYCP2-209ENST00000476314 NUBP1P53384 320 aa12.01□□□□□ -0.49
SYCP2-209ENST00000476314 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms