RNA–Protein interactions for RNA: ENST00000476250.5

PGAP1-209, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 3

Gene PGAP1, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-209ENST00000476250 AEBP2Q6ZN18 517 aaPredicted RBP30.21■■■□□ 2.43
PGAP1-209ENST00000476250 CHIC1Q5VXU3 224 aa28.34■■■□□ 2.13
PGAP1-209ENST00000476250 SENP3Q9H4L4 574 aaPredicted RBP25.98■■□□□ 1.75
PGAP1-209ENST00000476250 PHF23Q9BUL5 403 aaPredicted RBP25.52■■□□□ 1.68
PGAP1-209ENST00000476250 FOXD1Q16676 465 aa24.26■■□□□ 1.47
PGAP1-209ENST00000476250 POTEDQ86YR6 584 aa23.75■■□□□ 1.39
PGAP1-209ENST00000476250 MSH5O43196 834 aa23.05■■□□□ 1.28
PGAP1-209ENST00000476250 PIAS4Q8N2W9 510 aaPredicted RBP22.57■■□□□ 1.2
PGAP1-209ENST00000476250 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
PGAP1-209ENST00000476250 PPP6R1Q9UPN7 881 aa22.07■■□□□ 1.12
PGAP1-209ENST00000476250 ADRA2BP18089 450 aa22.01■■□□□ 1.11
PGAP1-209ENST00000476250 MAPK8IP2Q13387 824 aaPredicted RBP20.44■□□□□ 0.86
PGAP1-209ENST00000476250 DMRT2Q9Y5R5 561 aa20.43■□□□□ 0.86
PGAP1-209ENST00000476250 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
PGAP1-209ENST00000476250 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
PGAP1-209ENST00000476250 DCAF8L1A6NGE4 600 aa19.83■□□□□ 0.77
PGAP1-209ENST00000476250 RNF39Q9H2S5 420 aa19.54■□□□□ 0.72
PGAP1-209ENST00000476250 HOXD11P31277 338 aaPredicted RBP19.36■□□□□ 0.69
PGAP1-209ENST00000476250 C1QBPQ07021 282 aaKnown RBP19.25■□□□□ 0.67
PGAP1-209ENST00000476250 PPP4R3CPQ6ZMV5 832 aa19.24■□□□□ 0.67
PGAP1-209ENST00000476250 CNKSR2Q8WXI2 1034 aa19.05■□□□□ 0.64
PGAP1-209ENST00000476250 RNF216Q9NWF9 866 aaPredicted RBP19.05■□□□□ 0.64
PGAP1-209ENST00000476250 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
PGAP1-209ENST00000476250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.59■□□□□ 0.57
PGAP1-209ENST00000476250 POTEHQ6S545 545 aa18.49■□□□□ 0.55
PGAP1-209ENST00000476250 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.52
PGAP1-209ENST00000476250 CAPN15O75808 1086 aa18.1■□□□□ 0.49
PGAP1-209ENST00000476250 DSG3P32926 999 aa18.05■□□□□ 0.48
PGAP1-209ENST00000476250 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
PGAP1-209ENST00000476250 U3KPZ7 1027 aaPredicted RBP18.02■□□□□ 0.48
PGAP1-209ENST00000476250 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
PGAP1-209ENST00000476250 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
PGAP1-209ENST00000476250 ABCB7O75027 752 aa17.6■□□□□ 0.41
PGAP1-209ENST00000476250 APLP2Q06481 763 aa17.53■□□□□ 0.4
PGAP1-209ENST00000476250 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
PGAP1-209ENST00000476250 SLC4A2P04920 1241 aa17.36■□□□□ 0.37
PGAP1-209ENST00000476250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
PGAP1-209ENST00000476250 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
PGAP1-209ENST00000476250 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
PGAP1-209ENST00000476250 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
PGAP1-209ENST00000476250 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
PGAP1-209ENST00000476250 KCNA4P22459 653 aa17.15■□□□□ 0.34
PGAP1-209ENST00000476250 SP7Q8TDD2 431 aaPredicted RBP16.98■□□□□ 0.31
PGAP1-209ENST00000476250 POLA2Q14181 598 aa16.93■□□□□ 0.3
PGAP1-209ENST00000476250 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
PGAP1-209ENST00000476250 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.27
PGAP1-209ENST00000476250 PIP4P2Q8N4L2 257 aa16.63■□□□□ 0.25
PGAP1-209ENST00000476250 HAX1O00165 279 aa16.62■□□□□ 0.25
PGAP1-209ENST00000476250 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
PGAP1-209ENST00000476250 ZBTB12Q9Y330 459 aaPredicted RBP16.54■□□□□ 0.24
PGAP1-209ENST00000476250 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
PGAP1-209ENST00000476250 PITPNM1O00562 1244 aa16.41■□□□□ 0.22
PGAP1-209ENST00000476250 FXR2P51116 673 aaKnown RBP eCLIP16.36■□□□□ 0.21
PGAP1-209ENST00000476250 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
PGAP1-209ENST00000476250 EVX2Q03828 476 aa16.22■□□□□ 0.19
PGAP1-209ENST00000476250 FOXD4L1Q9NU39 408 aa16.22■□□□□ 0.19
PGAP1-209ENST00000476250 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
PGAP1-209ENST00000476250 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
PGAP1-209ENST00000476250 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
PGAP1-209ENST00000476250 SPDYE2BA6NHP3 402 aa15.94■□□□□ 0.14
PGAP1-209ENST00000476250 SPDYE6P0CI01 402 aa15.94■□□□□ 0.14
PGAP1-209ENST00000476250 SPDYE2Q495Y8 402 aa15.94■□□□□ 0.14
PGAP1-209ENST00000476250 LHX8Q68G74 356 aa15.93■□□□□ 0.14
PGAP1-209ENST00000476250 C19orf67A6NJJ6 358 aa15.88■□□□□ 0.13
PGAP1-209ENST00000476250 SPDYE1Q8NFV5 336 aaPredicted RBP15.88■□□□□ 0.13
PGAP1-209ENST00000476250 GABBR2O75899 941 aa15.87■□□□□ 0.13
PGAP1-209ENST00000476250 FBLN2P98095 1184 aa15.85■□□□□ 0.13
PGAP1-209ENST00000476250 ATXN8OSP0DMR3 200 aa15.79■□□□□ 0.12
PGAP1-209ENST00000476250 ZBTB22O15209 634 aa15.75■□□□□ 0.11
PGAP1-209ENST00000476250 CHADLQ6NUI6 762 aa15.67■□□□□ 0.1
PGAP1-209ENST00000476250 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
PGAP1-209ENST00000476250 PLSCR2Q9NRY7 297 aa15.66■□□□□ 0.1
PGAP1-209ENST00000476250 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
PGAP1-209ENST00000476250 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
PGAP1-209ENST00000476250 PRR29P0C7W0 189 aa15.55■□□□□ 0.08
PGAP1-209ENST00000476250 CD44P16070 742 aaKnown RBP15.47■□□□□ 0.07
PGAP1-209ENST00000476250 POTEIP0CG38 1075 aa15.46■□□□□ 0.07
PGAP1-209ENST00000476250 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
PGAP1-209ENST00000476250 DCBLD2Q96PD2 775 aa15.38■□□□□ 0.05
PGAP1-209ENST00000476250 CLCN6P51797 869 aa15.34■□□□□ 0.05
PGAP1-209ENST00000476250 FARP1Q9Y4F1 1045 aaPredicted RBP15.34■□□□□ 0.05
PGAP1-209ENST00000476250 ZRANB1Q9UGI0 708 aa15.15■□□□□ 0.02
PGAP1-209ENST00000476250 ZNF579Q8NAF0 562 aaKnown RBP15.12■□□□□ 0.01
PGAP1-209ENST00000476250 OTUD5Q96G74 571 aa15.07■□□□□ 0
PGAP1-209ENST00000476250 POTEMA6NI47 508 aa15.06■□□□□ 0
PGAP1-209ENST00000476250 GALR2O43603 387 aaPredicted RBP15.02■□□□□ -0
PGAP1-209ENST00000476250 POTEGQ6S5H5 508 aa14.99□□□□□ -0.01
PGAP1-209ENST00000476250 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
PGAP1-209ENST00000476250 POTEB2H3BUK9 544 aa14.95□□□□□ -0.02
PGAP1-209ENST00000476250 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
PGAP1-209ENST00000476250 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
PGAP1-209ENST00000476250 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
PGAP1-209ENST00000476250 PHF12Q96QT6 1004 aa14.84□□□□□ -0.03
PGAP1-209ENST00000476250 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
PGAP1-209ENST00000476250 PCDH10Q9P2E7 1040 aa14.81□□□□□ -0.04
PGAP1-209ENST00000476250 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
PGAP1-209ENST00000476250 METRNQ9UJH8 293 aa14.73□□□□□ -0.05
PGAP1-209ENST00000476250 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
PGAP1-209ENST00000476250 MAMSTRQ6ZN01 415 aa14.68□□□□□ -0.06
PGAP1-209ENST00000476250 SLC39A7Q92504 469 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms