RNA–Protein interactions for RNA: ENST00000476060.2

SENP6-207, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-207ENST00000476060 AEBP2Q6ZN18 517 aaPredicted RBP12.94□□□□□ -0.34
SENP6-207ENST00000476060 CHIC1Q5VXU3 224 aa12.03□□□□□ -0.48
SENP6-207ENST00000476060 POTEDQ86YR6 584 aa11.31□□□□□ -0.6
SENP6-207ENST00000476060 SENP3Q9H4L4 574 aaPredicted RBP11.01□□□□□ -0.65
SENP6-207ENST00000476060 PHF23Q9BUL5 403 aaPredicted RBP10.88□□□□□ -0.67
SENP6-207ENST00000476060 FOXD1Q16676 465 aa10.35□□□□□ -0.75
SENP6-207ENST00000476060 MSH5O43196 834 aa9.72□□□□□ -0.85
SENP6-207ENST00000476060 PIAS4Q8N2W9 510 aaPredicted RBP9.6□□□□□ -0.87
SENP6-207ENST00000476060 PPP6R1Q9UPN7 881 aa9.52□□□□□ -0.89
SENP6-207ENST00000476060 ADRA2BP18089 450 aa9.47□□□□□ -0.89
SENP6-207ENST00000476060 PLPPR3Q6T4P5 718 aa9.47□□□□□ -0.89
SENP6-207ENST00000476060 MAPK8IP2Q13387 824 aaPredicted RBP8.79□□□□□ -1
SENP6-207ENST00000476060 DMRT2Q9Y5R5 561 aa8.7□□□□□ -1.02
SENP6-207ENST00000476060 CACNB1Q02641 598 aaPredicted RBP8.67□□□□□ -1.02
SENP6-207ENST00000476060 KCNA4P22459 653 aa8.65□□□□□ -1.02
SENP6-207ENST00000476060 EHMT2Q96KQ7 1210 aa8.63□□□□□ -1.03
SENP6-207ENST00000476060 SCAF1Q9H7N4 1312 aaKnown RBP8.59□□□□□ -1.04
SENP6-207ENST00000476060 POTEHQ6S545 545 aa8.52□□□□□ -1.05
SENP6-207ENST00000476060 DCAF8L1A6NGE4 600 aa8.43□□□□□ -1.06
SENP6-207ENST00000476060 PPP4R3CPQ6ZMV5 832 aa8.32□□□□□ -1.08
SENP6-207ENST00000476060 RNF39Q9H2S5 420 aa8.29□□□□□ -1.08
SENP6-207ENST00000476060 HOXD11P31277 338 aaPredicted RBP8.28□□□□□ -1.08
SENP6-207ENST00000476060 SLC4A1APQ9BWU0 796 aaKnown RBP8.28□□□□□ -1.08
SENP6-207ENST00000476060 CSRNP3Q8WYN3 585 aa8.26□□□□□ -1.09
SENP6-207ENST00000476060 CNKSR2Q8WXI2 1034 aa8.17□□□□□ -1.1
SENP6-207ENST00000476060 NCBP3Q53F19 620 aaKnown RBP8.17□□□□□ -1.1
SENP6-207ENST00000476060 RNF216Q9NWF9 866 aaPredicted RBP8.15□□□□□ -1.1
SENP6-207ENST00000476060 C1QBPQ07021 282 aaKnown RBP8.13□□□□□ -1.11
SENP6-207ENST00000476060 NPM3O75607 178 aaKnown RBP8.11□□□□□ -1.11
SENP6-207ENST00000476060 ZBTB22O15209 634 aa7.98□□□□□ -1.13
SENP6-207ENST00000476060 DNAJC5BQ9UF47 199 aa7.98□□□□□ -1.13
SENP6-207ENST00000476060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.92□□□□□ -1.146e-7■□□□□ 10.8
SENP6-207ENST00000476060 FOXD4L1Q9NU39 408 aa7.78□□□□□ -1.16
SENP6-207ENST00000476060 U3KPZ7 1027 aaPredicted RBP7.73□□□□□ -1.17
SENP6-207ENST00000476060 SPINK5Q9NQ38 1064 aaPredicted RBP7.72□□□□□ -1.17
SENP6-207ENST00000476060 PLSCR2Q9NRY7 297 aa7.72□□□□□ -1.17
SENP6-207ENST00000476060 CAPN15O75808 1086 aa7.71□□□□□ -1.18
SENP6-207ENST00000476060 DSG3P32926 999 aa7.7□□□□□ -1.18
SENP6-207ENST00000476060 SLC4A2P04920 1241 aa7.57□□□□□ -1.2
SENP6-207ENST00000476060 RTN4Q9NQC3 1192 aaKnown RBP7.56□□□□□ -1.2
SENP6-207ENST00000476060 TRHP20396 242 aaPredicted RBP7.54□□□□□ -1.2
SENP6-207ENST00000476060 ABCB7O75027 752 aa7.54□□□□□ -1.2
SENP6-207ENST00000476060 SLC24A1O60721 1099 aa7.48□□□□□ -1.21
SENP6-207ENST00000476060 AMER1Q5JTC6 1135 aaPredicted RBP7.47□□□□□ -1.21
SENP6-207ENST00000476060 FKBP8Q14318 412 aa7.46□□□□□ -1.22
SENP6-207ENST00000476060 ZNF219Q9P2Y4 722 aaPredicted RBP7.45□□□□□ -1.22
SENP6-207ENST00000476060 MYCNP04198 464 aaPredicted RBP7.44□□□□□ -1.22
SENP6-207ENST00000476060 APLP2Q06481 763 aa7.41□□□□□ -1.22
SENP6-207ENST00000476060 ATXN8OSP0DMR3 200 aa7.4□□□□□ -1.23
SENP6-207ENST00000476060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.36□□□□□ -1.23
SENP6-207ENST00000476060 HNRNPUL2Q1KMD3 747 aaKnown RBP7.36□□□□□ -1.23
SENP6-207ENST00000476060 SP7Q8TDD2 431 aaPredicted RBP7.34□□□□□ -1.24
SENP6-207ENST00000476060 SAMD1Q6SPF0 538 aaPredicted RBP7.32□□□□□ -1.24
SENP6-207ENST00000476060 RBM42Q9BTD8 480 aaKnown RBP7.31□□□□□ -1.24
SENP6-207ENST00000476060 ATF5Q9Y2D1 282 aaPredicted RBP7.31□□□□□ -1.24
SENP6-207ENST00000476060 CHRDL2Q6WN34 429 aa7.28□□□□□ -1.24
SENP6-207ENST00000476060 POLA2Q14181 598 aa7.26□□□□□ -1.25
SENP6-207ENST00000476060 AKT1S1Q96B36 256 aa7.11□□□□□ -1.27
SENP6-207ENST00000476060 REM2Q8IYK8 340 aaPredicted RBP7.07□□□□□ -1.28
SENP6-207ENST00000476060 PIP4P2Q8N4L2 257 aa7.07□□□□□ -1.28
SENP6-207ENST00000476060 OSCARQ8IYS5 282 aa7.04□□□□□ -1.28
SENP6-207ENST00000476060 HAX1O00165 279 aa7.03□□□□□ -1.28
SENP6-207ENST00000476060 ZBTB12Q9Y330 459 aaPredicted RBP7.02□□□□□ -1.29
SENP6-207ENST00000476060 SPDYE4A6NLX3 237 aa7.01□□□□□ -1.29
SENP6-207ENST00000476060 PITPNM1O00562 1244 aa7□□□□□ -1.29
SENP6-207ENST00000476060 MKRN4PQ13434 485 aaPredicted RBP6.98□□□□□ -1.29
SENP6-207ENST00000476060 FBXO3Q9UK99 471 aa6.98□□□□□ -1.29
SENP6-207ENST00000476060 FXR2P51116 673 aaKnown RBP eCLIP6.97□□□□□ -1.29
SENP6-207ENST00000476060 EVX2Q03828 476 aa6.94□□□□□ -1.3
SENP6-207ENST00000476060 DCAF8L2P0C7V8 631 aa6.93□□□□□ -1.3
SENP6-207ENST00000476060 VASPP50552 380 aaPredicted RBP6.93□□□□□ -1.3
SENP6-207ENST00000476060 PLCB2Q00722 1185 aa6.92□□□□□ -1.3
SENP6-207ENST00000476060 IFNLR1Q8IU57 520 aaPredicted RBP6.89□□□□□ -1.31
SENP6-207ENST00000476060 FBLN2P98095 1184 aa6.89□□□□□ -1.31
SENP6-207ENST00000476060 HAP1P54257 671 aaPredicted RBP6.88□□□□□ -1.31
SENP6-207ENST00000476060 PROM2Q8N271 834 aa6.88□□□□□ -1.31
SENP6-207ENST00000476060 LHX8Q68G74 356 aa6.86□□□□□ -1.31
SENP6-207ENST00000476060 PRKAR2AP13861 404 aaKnown RBP6.83□□□□□ -1.32
SENP6-207ENST00000476060 CLEC11AQ9Y240 323 aa6.83□□□□□ -1.32
SENP6-207ENST00000476060 PKD2Q13563 968 aa6.82□□□□□ -1.32
SENP6-207ENST00000476060 SPDYE2BA6NHP3 402 aa6.81□□□□□ -1.32
SENP6-207ENST00000476060 SPDYE6P0CI01 402 aa6.81□□□□□ -1.32
SENP6-207ENST00000476060 SPDYE2Q495Y8 402 aa6.81□□□□□ -1.32
SENP6-207ENST00000476060 SPDYE1Q8NFV5 336 aaPredicted RBP6.76□□□□□ -1.33
SENP6-207ENST00000476060 C19orf67A6NJJ6 358 aa6.75□□□□□ -1.33
SENP6-207ENST00000476060 PRKCSHP14314 528 aaPredicted RBP6.75□□□□□ -1.33
SENP6-207ENST00000476060 KLHL34Q8N239 644 aa6.75□□□□□ -1.33
SENP6-207ENST00000476060 GABBR2O75899 941 aa6.74□□□□□ -1.33
SENP6-207ENST00000476060 CHADLQ6NUI6 762 aa6.74□□□□□ -1.33
SENP6-207ENST00000476060 ZNF692Q9BU19 519 aaPredicted RBP6.73□□□□□ -1.33
SENP6-207ENST00000476060 ECM2O94769 699 aaPredicted RBP6.71□□□□□ -1.34
SENP6-207ENST00000476060 SPOCK2Q92563 424 aa6.71□□□□□ -1.34
SENP6-207ENST00000476060 BCANQ96GW7 911 aa6.71□□□□□ -1.34
SENP6-207ENST00000476060 NPM1P06748 294 aaKnown RBP eCLIP6.7□□□□□ -1.34
SENP6-207ENST00000476060 SSUH2Q9Y2M2 353 aa6.7□□□□□ -1.34
SENP6-207ENST00000476060 VSIG10Q8N0Z9 540 aa6.69□□□□□ -1.34
SENP6-207ENST00000476060 CFAP44Q96MT7 982 aa6.69□□□□□ -1.34
SENP6-207ENST00000476060 PAXIP1Q6ZW49 1069 aaPredicted RBP6.68□□□□□ -1.34
SENP6-207ENST00000476060 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.67□□□□□ -1.34
SENP6-207ENST00000476060 KDM2AQ9Y2K7 1162 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms