RNA–Protein interactions for RNA: ENST00000475858.1

FAM107B-216, Transcript of family with sequence similarity 107 member B, humanhuman

TSL 2

Gene FAM107B, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM107B-216ENST00000475858 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
FAM107B-216ENST00000475858 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
FAM107B-216ENST00000475858 SENP3Q9H4L4 574 aaPredicted RBP23.09■■□□□ 1.29
FAM107B-216ENST00000475858 PHF23Q9BUL5 403 aaPredicted RBP22.75■■□□□ 1.23
FAM107B-216ENST00000475858 FOXD1Q16676 465 aa21.42■■□□□ 1.02
FAM107B-216ENST00000475858 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
FAM107B-216ENST00000475858 MSH5O43196 834 aa20.15■□□□□ 0.82
FAM107B-216ENST00000475858 PIAS4Q8N2W9 510 aaPredicted RBP20.11■□□□□ 0.81
FAM107B-216ENST00000475858 ADRA2BP18089 450 aa20■□□□□ 0.79
FAM107B-216ENST00000475858 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
FAM107B-216ENST00000475858 POTEDQ86YR6 584 aa19.54■□□□□ 0.72
FAM107B-216ENST00000475858 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
FAM107B-216ENST00000475858 MAPK8IP2Q13387 824 aaPredicted RBP18.34■□□□□ 0.53
FAM107B-216ENST00000475858 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
FAM107B-216ENST00000475858 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
FAM107B-216ENST00000475858 CNKSR2Q8WXI2 1034 aa17.68■□□□□ 0.42
FAM107B-216ENST00000475858 DCAF8L1A6NGE4 600 aa17.65■□□□□ 0.42
FAM107B-216ENST00000475858 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
FAM107B-216ENST00000475858 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
FAM107B-216ENST00000475858 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
FAM107B-216ENST00000475858 CACNB1Q02641 598 aaPredicted RBP17.31■□□□□ 0.36
FAM107B-216ENST00000475858 RNF39Q9H2S5 420 aa17.12■□□□□ 0.33
FAM107B-216ENST00000475858 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
FAM107B-216ENST00000475858 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
FAM107B-216ENST00000475858 C1QBPQ07021 282 aaKnown RBP16.94■□□□□ 0.3
FAM107B-216ENST00000475858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
FAM107B-216ENST00000475858 KCNA4P22459 653 aa16.71■□□□□ 0.27
FAM107B-216ENST00000475858 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
FAM107B-216ENST00000475858 CAPN15O75808 1086 aa16.24■□□□□ 0.19
FAM107B-216ENST00000475858 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
FAM107B-216ENST00000475858 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
FAM107B-216ENST00000475858 APLP2Q06481 763 aa16.15■□□□□ 0.18
FAM107B-216ENST00000475858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
FAM107B-216ENST00000475858 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
FAM107B-216ENST00000475858 DSG3P32926 999 aa16.04■□□□□ 0.16
FAM107B-216ENST00000475858 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
FAM107B-216ENST00000475858 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
FAM107B-216ENST00000475858 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
FAM107B-216ENST00000475858 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
FAM107B-216ENST00000475858 ABCB7O75027 752 aa15.81■□□□□ 0.12
FAM107B-216ENST00000475858 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
FAM107B-216ENST00000475858 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
FAM107B-216ENST00000475858 POLA2Q14181 598 aa15.52■□□□□ 0.08
FAM107B-216ENST00000475858 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
FAM107B-216ENST00000475858 POTEHQ6S545 545 aa15.36■□□□□ 0.05
FAM107B-216ENST00000475858 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
FAM107B-216ENST00000475858 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
FAM107B-216ENST00000475858 ZBTB22O15209 634 aa15.28■□□□□ 0.04
FAM107B-216ENST00000475858 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
FAM107B-216ENST00000475858 AKT1S1Q96B36 256 aa15.02■□□□□ -0
FAM107B-216ENST00000475858 CHRDL2Q6WN34 429 aa15.01□□□□□ -0.01
FAM107B-216ENST00000475858 OSCARQ8IYS5 282 aa15□□□□□ -0.01
FAM107B-216ENST00000475858 FBLN2P98095 1184 aa14.94□□□□□ -0.02
FAM107B-216ENST00000475858 REM2Q8IYK8 340 aaPredicted RBP14.86□□□□□ -0.03
FAM107B-216ENST00000475858 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
FAM107B-216ENST00000475858 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
FAM107B-216ENST00000475858 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
FAM107B-216ENST00000475858 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
FAM107B-216ENST00000475858 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
FAM107B-216ENST00000475858 PIP4P2Q8N4L2 257 aa14.63□□□□□ -0.07
FAM107B-216ENST00000475858 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
FAM107B-216ENST00000475858 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
FAM107B-216ENST00000475858 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
FAM107B-216ENST00000475858 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
FAM107B-216ENST00000475858 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
FAM107B-216ENST00000475858 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
FAM107B-216ENST00000475858 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
FAM107B-216ENST00000475858 HAX1O00165 279 aa14.46□□□□□ -0.09
FAM107B-216ENST00000475858 SP7Q8TDD2 431 aaPredicted RBP14.42□□□□□ -0.1
FAM107B-216ENST00000475858 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
FAM107B-216ENST00000475858 PRKAR2AP13861 404 aaKnown RBP14.35□□□□□ -0.11
FAM107B-216ENST00000475858 PRR29P0C7W0 189 aa14.28□□□□□ -0.12
FAM107B-216ENST00000475858 CHADLQ6NUI6 762 aa14.15□□□□□ -0.14
FAM107B-216ENST00000475858 EVX2Q03828 476 aa14.1□□□□□ -0.15
FAM107B-216ENST00000475858 SPDYE4A6NLX3 237 aa14.07□□□□□ -0.16
FAM107B-216ENST00000475858 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
FAM107B-216ENST00000475858 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
FAM107B-216ENST00000475858 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
FAM107B-216ENST00000475858 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
FAM107B-216ENST00000475858 GABBR2O75899 941 aa13.88□□□□□ -0.19
FAM107B-216ENST00000475858 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
FAM107B-216ENST00000475858 CLCN6P51797 869 aa13.77□□□□□ -0.21
FAM107B-216ENST00000475858 ZRANB1Q9UGI0 708 aa13.73□□□□□ -0.21
FAM107B-216ENST00000475858 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
FAM107B-216ENST00000475858 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
FAM107B-216ENST00000475858 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
FAM107B-216ENST00000475858 DCBLD2Q96PD2 775 aa13.62□□□□□ -0.23
FAM107B-216ENST00000475858 PROM2Q8N271 834 aa13.6□□□□□ -0.23
FAM107B-216ENST00000475858 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
FAM107B-216ENST00000475858 LHX8Q68G74 356 aa13.55□□□□□ -0.24
FAM107B-216ENST00000475858 MNX1P50219 401 aaPredicted RBP13.52□□□□□ -0.25
FAM107B-216ENST00000475858 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
FAM107B-216ENST00000475858 MIER1Q8N108 512 aa13.48□□□□□ -0.25
FAM107B-216ENST00000475858 PHF12Q96QT6 1004 aa13.47□□□□□ -0.25
FAM107B-216ENST00000475858 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.25
FAM107B-216ENST00000475858 TSPYL2Q9H2G4 693 aaPredicted RBP13.41□□□□□ -0.26
FAM107B-216ENST00000475858 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
FAM107B-216ENST00000475858 FKBP8Q14318 412 aa13.39□□□□□ -0.27
FAM107B-216ENST00000475858 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
FAM107B-216ENST00000475858 MS4A3Q96HJ5 214 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms