RNA–Protein interactions for RNA: ENST00000475752.1

SCG5-205, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 867 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-205ENST00000475752 AEBP2Q6ZN18 517 aaPredicted RBP31.24■■■□□ 2.59
SCG5-205ENST00000475752 CHIC1Q5VXU3 224 aa29.86■■■□□ 2.37
SCG5-205ENST00000475752 SENP3Q9H4L4 574 aaPredicted RBP26.72■■□□□ 1.87
SCG5-205ENST00000475752 PHF23Q9BUL5 403 aaPredicted RBP26.34■■□□□ 1.81
SCG5-205ENST00000475752 FOXD1Q16676 465 aa24.81■■□□□ 1.56
SCG5-205ENST00000475752 PLPPR3Q6T4P5 718 aa23.96■■□□□ 1.43
SCG5-205ENST00000475752 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
SCG5-205ENST00000475752 PIAS4Q8N2W9 510 aaPredicted RBP23.27■■□□□ 1.32
SCG5-205ENST00000475752 MSH5O43196 834 aa23.25■■□□□ 1.31
SCG5-205ENST00000475752 ADRA2BP18089 450 aa23.23■■□□□ 1.31
SCG5-205ENST00000475752 POTEDQ86YR6 584 aa22.37■■□□□ 1.17
SCG5-205ENST00000475752 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
SCG5-205ENST00000475752 MAPK8IP2Q13387 824 aaPredicted RBP21.28■■□□□ 1
SCG5-205ENST00000475752 DMRT2Q9Y5R5 561 aa21.18■□□□□ 0.98
SCG5-205ENST00000475752 PPP4R3CPQ6ZMV5 832 aa20.98■□□□□ 0.95
SCG5-205ENST00000475752 CNKSR2Q8WXI2 1034 aa20.58■□□□□ 0.89
SCG5-205ENST00000475752 HOXD11P31277 338 aaPredicted RBP20.45■□□□□ 0.86
SCG5-205ENST00000475752 RNF216Q9NWF9 866 aaPredicted RBP20.36■□□□□ 0.85
SCG5-205ENST00000475752 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
SCG5-205ENST00000475752 NCBP3Q53F19 620 aaKnown RBP20.29■□□□□ 0.84
SCG5-205ENST00000475752 NPM3O75607 178 aaKnown RBP19.93■□□□□ 0.78
SCG5-205ENST00000475752 CACNB1Q02641 598 aaPredicted RBP19.84■□□□□ 0.77
SCG5-205ENST00000475752 RNF39Q9H2S5 420 aa19.81■□□□□ 0.76
SCG5-205ENST00000475752 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
SCG5-205ENST00000475752 KCNA4P22459 653 aa19.66■□□□□ 0.74
SCG5-205ENST00000475752 C1QBPQ07021 282 aaKnown RBP19.56■□□□□ 0.72
SCG5-205ENST00000475752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.53■□□□□ 0.72
SCG5-205ENST00000475752 U3KPZ7 1027 aaPredicted RBP19.08■□□□□ 0.64
SCG5-205ENST00000475752 SLC4A2P04920 1241 aa18.96■□□□□ 0.63
SCG5-205ENST00000475752 CAPN15O75808 1086 aa18.76■□□□□ 0.59
SCG5-205ENST00000475752 SPINK5Q9NQ38 1064 aaPredicted RBP18.75■□□□□ 0.59
SCG5-205ENST00000475752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.69■□□□□ 0.58
SCG5-205ENST00000475752 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
SCG5-205ENST00000475752 APLP2Q06481 763 aa18.68■□□□□ 0.58
SCG5-205ENST00000475752 SLC4A1APQ9BWU0 796 aaKnown RBP18.63■□□□□ 0.57
SCG5-205ENST00000475752 DSG3P32926 999 aa18.59■□□□□ 0.57
SCG5-205ENST00000475752 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
SCG5-205ENST00000475752 ZNF219Q9P2Y4 722 aaPredicted RBP18.51■□□□□ 0.55
SCG5-205ENST00000475752 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
SCG5-205ENST00000475752 MYCNP04198 464 aaPredicted RBP18.47■□□□□ 0.55
SCG5-205ENST00000475752 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
SCG5-205ENST00000475752 ABCB7O75027 752 aa18.31■□□□□ 0.52
SCG5-205ENST00000475752 ZBTB22O15209 634 aa18.05■□□□□ 0.48
SCG5-205ENST00000475752 POLA2Q14181 598 aa18■□□□□ 0.47
SCG5-205ENST00000475752 ATF5Q9Y2D1 282 aaPredicted RBP17.95■□□□□ 0.46
SCG5-205ENST00000475752 RBM42Q9BTD8 480 aaKnown RBP17.81■□□□□ 0.44
SCG5-205ENST00000475752 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
SCG5-205ENST00000475752 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
SCG5-205ENST00000475752 POTEHQ6S545 545 aa17.59■□□□□ 0.41
SCG5-205ENST00000475752 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
SCG5-205ENST00000475752 AKT1S1Q96B36 256 aa17.4■□□□□ 0.38
SCG5-205ENST00000475752 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
SCG5-205ENST00000475752 FBLN2P98095 1184 aa17.35■□□□□ 0.37
SCG5-205ENST00000475752 CHRDL2Q6WN34 429 aa17.31■□□□□ 0.36
SCG5-205ENST00000475752 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
SCG5-205ENST00000475752 REM2Q8IYK8 340 aaPredicted RBP17.2■□□□□ 0.34
SCG5-205ENST00000475752 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
SCG5-205ENST00000475752 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
SCG5-205ENST00000475752 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
SCG5-205ENST00000475752 MKRN4PQ13434 485 aaPredicted RBP17.14■□□□□ 0.33
SCG5-205ENST00000475752 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
SCG5-205ENST00000475752 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
SCG5-205ENST00000475752 SSUH2Q9Y2M2 353 aa16.93■□□□□ 0.3
SCG5-205ENST00000475752 PIP4P2Q8N4L2 257 aa16.91■□□□□ 0.3
SCG5-205ENST00000475752 SPDYE1Q8NFV5 336 aaPredicted RBP16.84■□□□□ 0.29
SCG5-205ENST00000475752 FXR2P51116 673 aaKnown RBP eCLIP16.83■□□□□ 0.28
SCG5-205ENST00000475752 CLEC11AQ9Y240 323 aa16.78■□□□□ 0.28
SCG5-205ENST00000475752 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
SCG5-205ENST00000475752 HAX1O00165 279 aa16.59■□□□□ 0.25
SCG5-205ENST00000475752 PRKAR2AP13861 404 aaKnown RBP16.59■□□□□ 0.25
SCG5-205ENST00000475752 SP7Q8TDD2 431 aaPredicted RBP16.56■□□□□ 0.24
SCG5-205ENST00000475752 PRR29P0C7W0 189 aa16.53■□□□□ 0.24
SCG5-205ENST00000475752 SPDYE4A6NLX3 237 aa16.46■□□□□ 0.23
SCG5-205ENST00000475752 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
SCG5-205ENST00000475752 STAG3Q9UJ98 1225 aa16.34■□□□□ 0.21
SCG5-205ENST00000475752 EVX2Q03828 476 aa16.31■□□□□ 0.2
SCG5-205ENST00000475752 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
SCG5-205ENST00000475752 FARP1Q9Y4F1 1045 aaPredicted RBP16.21■□□□□ 0.19
SCG5-205ENST00000475752 CREBZFQ9NS37 354 aa16.12■□□□□ 0.17
SCG5-205ENST00000475752 CD44P16070 742 aaKnown RBP16.09■□□□□ 0.17
SCG5-205ENST00000475752 PROM2Q8N271 834 aa16.06■□□□□ 0.16
SCG5-205ENST00000475752 GABBR2O75899 941 aa16.01■□□□□ 0.15
SCG5-205ENST00000475752 NPM1P06748 294 aaKnown RBP eCLIP15.9■□□□□ 0.14
SCG5-205ENST00000475752 CLCN6P51797 869 aa15.89■□□□□ 0.13
SCG5-205ENST00000475752 ZRANB1Q9UGI0 708 aa15.88■□□□□ 0.13
SCG5-205ENST00000475752 PAK3O75914 559 aaPredicted RBP15.85■□□□□ 0.13
SCG5-205ENST00000475752 ZNF579Q8NAF0 562 aaKnown RBP15.85■□□□□ 0.13
SCG5-205ENST00000475752 MNX1P50219 401 aaPredicted RBP15.84■□□□□ 0.13
SCG5-205ENST00000475752 FKBP8Q14318 412 aa15.79■□□□□ 0.12
SCG5-205ENST00000475752 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
SCG5-205ENST00000475752 MIER1Q8N108 512 aa15.69■□□□□ 0.1
SCG5-205ENST00000475752 DCBLD2Q96PD2 775 aa15.66■□□□□ 0.1
SCG5-205ENST00000475752 PHF12Q96QT6 1004 aa15.65■□□□□ 0.1
SCG5-205ENST00000475752 POTEIP0CG38 1075 aa15.63■□□□□ 0.09
SCG5-205ENST00000475752 GALR2O43603 387 aaPredicted RBP15.61■□□□□ 0.09
SCG5-205ENST00000475752 PLCD3Q8N3E9 789 aa15.61■□□□□ 0.09
SCG5-205ENST00000475752 TSPYL2Q9H2G4 693 aaPredicted RBP15.57■□□□□ 0.08
SCG5-205ENST00000475752 LHX8Q68G74 356 aa15.53■□□□□ 0.08
SCG5-205ENST00000475752 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
SCG5-205ENST00000475752 CCDC61Q9Y6R9 512 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms