RNA–Protein interactions for RNA: ENST00000475607.1

RABGAP1-209, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 4

Gene RABGAP1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-209ENST00000475607 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
RABGAP1-209ENST00000475607 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
RABGAP1-209ENST00000475607 SENP3Q9H4L4 574 aaPredicted RBP21.94■■□□□ 1.1
RABGAP1-209ENST00000475607 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
RABGAP1-209ENST00000475607 FOXD1Q16676 465 aa20.36■□□□□ 0.85
RABGAP1-209ENST00000475607 PLPPR3Q6T4P5 718 aa20.15■□□□□ 0.82
RABGAP1-209ENST00000475607 MSH5O43196 834 aa19.22■□□□□ 0.67
RABGAP1-209ENST00000475607 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
RABGAP1-209ENST00000475607 ADRA2BP18089 450 aa19.03■□□□□ 0.64
RABGAP1-209ENST00000475607 PPP6R1Q9UPN7 881 aa19.02■□□□□ 0.64
RABGAP1-209ENST00000475607 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
RABGAP1-209ENST00000475607 PPP4R3CPQ6ZMV5 832 aa17.77■□□□□ 0.44
RABGAP1-209ENST00000475607 KCNA4P22459 653 aa17.63■□□□□ 0.41
RABGAP1-209ENST00000475607 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
RABGAP1-209ENST00000475607 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
RABGAP1-209ENST00000475607 MAPK8IP2Q13387 824 aaPredicted RBP17.36■□□□□ 0.37
RABGAP1-209ENST00000475607 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
RABGAP1-209ENST00000475607 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
RABGAP1-209ENST00000475607 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
RABGAP1-209ENST00000475607 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
RABGAP1-209ENST00000475607 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
RABGAP1-209ENST00000475607 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
RABGAP1-209ENST00000475607 HOXD11P31277 338 aaPredicted RBP16.68■□□□□ 0.26
RABGAP1-209ENST00000475607 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
RABGAP1-209ENST00000475607 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
RABGAP1-209ENST00000475607 CACNB1Q02641 598 aaPredicted RBP16.59■□□□□ 0.25
RABGAP1-209ENST00000475607 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
RABGAP1-209ENST00000475607 RNF39Q9H2S5 420 aa16.32■□□□□ 0.2
RABGAP1-209ENST00000475607 ZBTB22O15209 634 aa16.19■□□□□ 0.18
RABGAP1-209ENST00000475607 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
RABGAP1-209ENST00000475607 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
RABGAP1-209ENST00000475607 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
RABGAP1-209ENST00000475607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.142e-7■■■■■ 28.1
RABGAP1-209ENST00000475607 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
RABGAP1-209ENST00000475607 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
RABGAP1-209ENST00000475607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
RABGAP1-209ENST00000475607 ATXN8OSP0DMR3 200 aa15.63■□□□□ 0.09
RABGAP1-209ENST00000475607 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
RABGAP1-209ENST00000475607 SAMD1Q6SPF0 538 aaPredicted RBP15.56■□□□□ 0.08
RABGAP1-209ENST00000475607 APLP2Q06481 763 aa15.42■□□□□ 0.06
RABGAP1-209ENST00000475607 CAPN15O75808 1086 aa15.39■□□□□ 0.05
RABGAP1-209ENST00000475607 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
RABGAP1-209ENST00000475607 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
RABGAP1-209ENST00000475607 DSG3P32926 999 aa15.23■□□□□ 0.03
RABGAP1-209ENST00000475607 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
RABGAP1-209ENST00000475607 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
RABGAP1-209ENST00000475607 ABCB7O75027 752 aa14.98□□□□□ -0.01
RABGAP1-209ENST00000475607 POLA2Q14181 598 aa14.9□□□□□ -0.02
RABGAP1-209ENST00000475607 POTEHQ6S545 545 aa14.82□□□□□ -0.04
RABGAP1-209ENST00000475607 FKBP8Q14318 412 aa14.78□□□□□ -0.04
RABGAP1-209ENST00000475607 FBLN2P98095 1184 aa14.76□□□□□ -0.05
RABGAP1-209ENST00000475607 ZBTB12Q9Y330 459 aaPredicted RBP14.72□□□□□ -0.05
RABGAP1-209ENST00000475607 MKRN4PQ13434 485 aaPredicted RBP14.69□□□□□ -0.06
RABGAP1-209ENST00000475607 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
RABGAP1-209ENST00000475607 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
RABGAP1-209ENST00000475607 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
RABGAP1-209ENST00000475607 CHRDL2Q6WN34 429 aa14.33□□□□□ -0.12
RABGAP1-209ENST00000475607 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
RABGAP1-209ENST00000475607 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
RABGAP1-209ENST00000475607 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
RABGAP1-209ENST00000475607 PROM2Q8N271 834 aa14.3□□□□□ -0.12
RABGAP1-209ENST00000475607 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
RABGAP1-209ENST00000475607 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
RABGAP1-209ENST00000475607 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
RABGAP1-209ENST00000475607 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
RABGAP1-209ENST00000475607 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
RABGAP1-209ENST00000475607 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
RABGAP1-209ENST00000475607 VASPP50552 380 aaPredicted RBP13.99□□□□□ -0.17
RABGAP1-209ENST00000475607 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
RABGAP1-209ENST00000475607 AMER1Q5JTC6 1135 aaPredicted RBP13.96□□□□□ -0.17
RABGAP1-209ENST00000475607 PIP4P2Q8N4L2 257 aa13.93□□□□□ -0.18
RABGAP1-209ENST00000475607 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
RABGAP1-209ENST00000475607 RTN4Q9NQC3 1192 aaKnown RBP13.87□□□□□ -0.19
RABGAP1-209ENST00000475607 SPDYE1Q8NFV5 336 aaPredicted RBP13.84□□□□□ -0.19
RABGAP1-209ENST00000475607 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
RABGAP1-209ENST00000475607 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
RABGAP1-209ENST00000475607 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
RABGAP1-209ENST00000475607 HAX1O00165 279 aa13.79□□□□□ -0.2
RABGAP1-209ENST00000475607 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
RABGAP1-209ENST00000475607 MIER1Q8N108 512 aa13.77□□□□□ -0.21
RABGAP1-209ENST00000475607 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
RABGAP1-209ENST00000475607 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
RABGAP1-209ENST00000475607 KLHL34Q8N239 644 aa13.73□□□□□ -0.21
RABGAP1-209ENST00000475607 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
RABGAP1-209ENST00000475607 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
RABGAP1-209ENST00000475607 SPOCK2Q92563 424 aa13.64□□□□□ -0.23
RABGAP1-209ENST00000475607 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
RABGAP1-209ENST00000475607 CREBZFQ9NS37 354 aa13.52□□□□□ -0.25
RABGAP1-209ENST00000475607 EVX2Q03828 476 aa13.44□□□□□ -0.26
RABGAP1-209ENST00000475607 PKD2Q13563 968 aa13.43□□□□□ -0.26
RABGAP1-209ENST00000475607 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
RABGAP1-209ENST00000475607 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
RABGAP1-209ENST00000475607 CIZ1Q9ULV3 898 aaPredicted RBP13.38□□□□□ -0.27
RABGAP1-209ENST00000475607 C19orf67A6NJJ6 358 aa13.37□□□□□ -0.27
RABGAP1-209ENST00000475607 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
RABGAP1-209ENST00000475607 NUBP1P53384 320 aa13.36□□□□□ -0.27
RABGAP1-209ENST00000475607 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
RABGAP1-209ENST00000475607 GSE1Q14687 1217 aa13.33□□□□□ -0.28
RABGAP1-209ENST00000475607 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
RABGAP1-209ENST00000475607 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 219.4 ms