RNA–Protein interactions for RNA: ENST00000475277.1

LYST-209, Transcript of lysosomal trafficking regulator, humanhuman

TSL 5

Gene LYST, Length 718 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-209ENST00000475277 AEBP2Q6ZN18 517 aaPredicted RBP29.14■■■□□ 2.26
LYST-209ENST00000475277 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
LYST-209ENST00000475277 SENP3Q9H4L4 574 aaPredicted RBP24.85■■□□□ 1.57
LYST-209ENST00000475277 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
LYST-209ENST00000475277 FOXD1Q16676 465 aa23.14■■□□□ 1.29
LYST-209ENST00000475277 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
LYST-209ENST00000475277 PPP6R1Q9UPN7 881 aa21.67■■□□□ 1.06
LYST-209ENST00000475277 MSH5O43196 834 aa21.64■■□□□ 1.05
LYST-209ENST00000475277 PIAS4Q8N2W9 510 aaPredicted RBP21.62■■□□□ 1.05
LYST-209ENST00000475277 ADRA2BP18089 450 aa21.58■■□□□ 1.05
LYST-209ENST00000475277 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
LYST-209ENST00000475277 MAPK8IP2Q13387 824 aaPredicted RBP19.8■□□□□ 0.76
LYST-209ENST00000475277 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
LYST-209ENST00000475277 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
LYST-209ENST00000475277 PPP4R3CPQ6ZMV5 832 aa19.44■□□□□ 0.7
LYST-209ENST00000475277 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
LYST-209ENST00000475277 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
LYST-209ENST00000475277 RNF216Q9NWF9 866 aaPredicted RBP18.89■□□□□ 0.61
LYST-209ENST00000475277 DCAF8L1A6NGE4 600 aa18.81■□□□□ 0.6
LYST-209ENST00000475277 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
LYST-209ENST00000475277 CACNB1Q02641 598 aaPredicted RBP18.48■□□□□ 0.55
LYST-209ENST00000475277 RNF39Q9H2S5 420 aa18.48■□□□□ 0.55
LYST-209ENST00000475277 NPM3O75607 178 aaKnown RBP18.45■□□□□ 0.54
LYST-209ENST00000475277 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
LYST-209ENST00000475277 C1QBPQ07021 282 aaKnown RBP18.2■□□□□ 0.5
LYST-209ENST00000475277 KCNA4P22459 653 aa18.14■□□□□ 0.49
LYST-209ENST00000475277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.48
LYST-209ENST00000475277 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
LYST-209ENST00000475277 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
LYST-209ENST00000475277 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
LYST-209ENST00000475277 CAPN15O75808 1086 aa17.38■□□□□ 0.37
LYST-209ENST00000475277 DSG3P32926 999 aa17.31■□□□□ 0.36
LYST-209ENST00000475277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
LYST-209ENST00000475277 APLP2Q06481 763 aa17.24■□□□□ 0.35
LYST-209ENST00000475277 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
LYST-209ENST00000475277 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
LYST-209ENST00000475277 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
LYST-209ENST00000475277 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
LYST-209ENST00000475277 TRHP20396 242 aaPredicted RBP17.11■□□□□ 0.33
LYST-209ENST00000475277 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
LYST-209ENST00000475277 ABCB7O75027 752 aa16.99■□□□□ 0.31
LYST-209ENST00000475277 FOXD4L1Q9NU39 408 aa16.93■□□□□ 0.3
LYST-209ENST00000475277 ZBTB22O15209 634 aa16.7■□□□□ 0.26
LYST-209ENST00000475277 POLA2Q14181 598 aa16.68■□□□□ 0.26
LYST-209ENST00000475277 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
LYST-209ENST00000475277 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
LYST-209ENST00000475277 POTEHQ6S545 545 aa16.46■□□□□ 0.23
LYST-209ENST00000475277 ATXN8OSP0DMR3 200 aa16.42■□□□□ 0.22
LYST-209ENST00000475277 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
LYST-209ENST00000475277 OSCARQ8IYS5 282 aa16.18■□□□□ 0.18
LYST-209ENST00000475277 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
LYST-209ENST00000475277 CHRDL2Q6WN34 429 aa16.12■□□□□ 0.17
LYST-209ENST00000475277 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
LYST-209ENST00000475277 FBLN2P98095 1184 aa15.98■□□□□ 0.15
LYST-209ENST00000475277 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
LYST-209ENST00000475277 MKRN4PQ13434 485 aaPredicted RBP15.91■□□□□ 0.14
LYST-209ENST00000475277 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
LYST-209ENST00000475277 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
LYST-209ENST00000475277 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
LYST-209ENST00000475277 PITPNM1O00562 1244 aa15.83■□□□□ 0.12
LYST-209ENST00000475277 PIP4P2Q8N4L2 257 aa15.76■□□□□ 0.11
LYST-209ENST00000475277 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
LYST-209ENST00000475277 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
LYST-209ENST00000475277 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
LYST-209ENST00000475277 ZNF692Q9BU19 519 aaPredicted RBP15.66■□□□□ 0.1
LYST-209ENST00000475277 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
LYST-209ENST00000475277 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
LYST-209ENST00000475277 SP7Q8TDD2 431 aaPredicted RBP15.47■□□□□ 0.07
LYST-209ENST00000475277 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
LYST-209ENST00000475277 HAX1O00165 279 aa15.4■□□□□ 0.06
LYST-209ENST00000475277 PRKAR2AP13861 404 aaKnown RBP15.4■□□□□ 0.06
LYST-209ENST00000475277 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
LYST-209ENST00000475277 EVX2Q03828 476 aa15.25■□□□□ 0.03
LYST-209ENST00000475277 CHADLQ6NUI6 762 aa15.22■□□□□ 0.03
LYST-209ENST00000475277 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
LYST-209ENST00000475277 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
LYST-209ENST00000475277 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
LYST-209ENST00000475277 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
LYST-209ENST00000475277 CREBZFQ9NS37 354 aa14.95□□□□□ -0.02
LYST-209ENST00000475277 CD44P16070 742 aaKnown RBP14.92□□□□□ -0.02
LYST-209ENST00000475277 GABBR2O75899 941 aa14.91□□□□□ -0.02
LYST-209ENST00000475277 PROM2Q8N271 834 aa14.89□□□□□ -0.03
LYST-209ENST00000475277 CLCN6P51797 869 aa14.74□□□□□ -0.05
LYST-209ENST00000475277 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
LYST-209ENST00000475277 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
LYST-209ENST00000475277 ZRANB1Q9UGI0 708 aa14.7□□□□□ -0.06
LYST-209ENST00000475277 NPM1P06748 294 aaKnown RBP eCLIP14.65□□□□□ -0.06
LYST-209ENST00000475277 POTEIP0CG38 1075 aa14.62□□□□□ -0.07
LYST-209ENST00000475277 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
LYST-209ENST00000475277 GALR2O43603 387 aaPredicted RBP14.52□□□□□ -0.09
LYST-209ENST00000475277 PHF12Q96QT6 1004 aa14.51□□□□□ -0.09
LYST-209ENST00000475277 DCBLD2Q96PD2 775 aa14.5□□□□□ -0.09
LYST-209ENST00000475277 LHX8Q68G74 356 aa14.49□□□□□ -0.09
LYST-209ENST00000475277 FKBP8Q14318 412 aa14.45□□□□□ -0.1
LYST-209ENST00000475277 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
LYST-209ENST00000475277 MIER1Q8N108 512 aa14.41□□□□□ -0.1
LYST-209ENST00000475277 TSPYL2Q9H2G4 693 aaPredicted RBP14.36□□□□□ -0.11
LYST-209ENST00000475277 CCDC61Q9Y6R9 512 aa14.36□□□□□ -0.11
LYST-209ENST00000475277 MS4A3Q96HJ5 214 aa14.34□□□□□ -0.11
LYST-209ENST00000475277 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms