RNA–Protein interactions for RNA: ENST00000474830.1

GSK3B-204, Transcript of glycogen synthase kinase 3 beta, humanhuman

TSL 2

Gene GSK3B, Length 518 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3B-204ENST00000474830 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
GSK3B-204ENST00000474830 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
GSK3B-204ENST00000474830 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.17
GSK3B-204ENST00000474830 PHF23Q9BUL5 403 aaPredicted RBP22.23■■□□□ 1.15
GSK3B-204ENST00000474830 FOXD1Q16676 465 aa20.87■□□□□ 0.93
GSK3B-204ENST00000474830 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
GSK3B-204ENST00000474830 PPP6R1Q9UPN7 881 aa19.76■□□□□ 0.75
GSK3B-204ENST00000474830 ADRA2BP18089 450 aa19.67■□□□□ 0.74
GSK3B-204ENST00000474830 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
GSK3B-204ENST00000474830 MSH5O43196 834 aa19.38■□□□□ 0.69
GSK3B-204ENST00000474830 POTEDQ86YR6 584 aa18.67■□□□□ 0.58
GSK3B-204ENST00000474830 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
GSK3B-204ENST00000474830 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
GSK3B-204ENST00000474830 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
GSK3B-204ENST00000474830 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
GSK3B-204ENST00000474830 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
GSK3B-204ENST00000474830 HOXD11P31277 338 aaPredicted RBP17.31■□□□□ 0.36
GSK3B-204ENST00000474830 RNF216Q9NWF9 866 aaPredicted RBP17.23■□□□□ 0.35
GSK3B-204ENST00000474830 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
GSK3B-204ENST00000474830 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
GSK3B-204ENST00000474830 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
GSK3B-204ENST00000474830 KCNA4P22459 653 aa16.93■□□□□ 0.3
GSK3B-204ENST00000474830 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
GSK3B-204ENST00000474830 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
GSK3B-204ENST00000474830 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
GSK3B-204ENST00000474830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
GSK3B-204ENST00000474830 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
GSK3B-204ENST00000474830 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
GSK3B-204ENST00000474830 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
GSK3B-204ENST00000474830 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
GSK3B-204ENST00000474830 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
GSK3B-204ENST00000474830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
GSK3B-204ENST00000474830 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
GSK3B-204ENST00000474830 CAPN15O75808 1086 aa15.71■□□□□ 0.11
GSK3B-204ENST00000474830 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
GSK3B-204ENST00000474830 FOXD4L1Q9NU39 408 aa15.68■□□□□ 0.1
GSK3B-204ENST00000474830 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
GSK3B-204ENST00000474830 DSG3P32926 999 aa15.64■□□□□ 0.09
GSK3B-204ENST00000474830 APLP2Q06481 763 aa15.64■□□□□ 0.09
GSK3B-204ENST00000474830 ZBTB22O15209 634 aa15.61■□□□□ 0.09
GSK3B-204ENST00000474830 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
GSK3B-204ENST00000474830 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
GSK3B-204ENST00000474830 ABCB7O75027 752 aa15.4■□□□□ 0.06
GSK3B-204ENST00000474830 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
GSK3B-204ENST00000474830 POLA2Q14181 598 aa15.23■□□□□ 0.03
GSK3B-204ENST00000474830 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
GSK3B-204ENST00000474830 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
GSK3B-204ENST00000474830 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
GSK3B-204ENST00000474830 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
GSK3B-204ENST00000474830 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
GSK3B-204ENST00000474830 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
GSK3B-204ENST00000474830 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
GSK3B-204ENST00000474830 FBLN2P98095 1184 aa14.65□□□□□ -0.06
GSK3B-204ENST00000474830 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
GSK3B-204ENST00000474830 POTEHQ6S545 545 aa14.55□□□□□ -0.08
GSK3B-204ENST00000474830 SPDYE2BA6NHP3 402 aa14.5□□□□□ -0.09
GSK3B-204ENST00000474830 SPDYE6P0CI01 402 aa14.5□□□□□ -0.09
GSK3B-204ENST00000474830 SPDYE2Q495Y8 402 aa14.5□□□□□ -0.09
GSK3B-204ENST00000474830 REM2Q8IYK8 340 aaPredicted RBP14.48□□□□□ -0.09
GSK3B-204ENST00000474830 CHRDL2Q6WN34 429 aa14.44□□□□□ -0.1
GSK3B-204ENST00000474830 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
GSK3B-204ENST00000474830 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
GSK3B-204ENST00000474830 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
GSK3B-204ENST00000474830 PIP4P2Q8N4L2 257 aa14.18□□□□□ -0.14
GSK3B-204ENST00000474830 FXR2P51116 673 aaKnown RBP eCLIP14.16□□□□□ -0.14
GSK3B-204ENST00000474830 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
GSK3B-204ENST00000474830 SPDYE1Q8NFV5 336 aaPredicted RBP14.16□□□□□ -0.14
GSK3B-204ENST00000474830 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
GSK3B-204ENST00000474830 SPDYE4A6NLX3 237 aa14.06□□□□□ -0.16
GSK3B-204ENST00000474830 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
GSK3B-204ENST00000474830 PRKAR2AP13861 404 aaKnown RBP13.92□□□□□ -0.18
GSK3B-204ENST00000474830 PROM2Q8N271 834 aa13.86□□□□□ -0.19
GSK3B-204ENST00000474830 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
GSK3B-204ENST00000474830 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
GSK3B-204ENST00000474830 HAX1O00165 279 aa13.79□□□□□ -0.2
GSK3B-204ENST00000474830 EVX2Q03828 476 aa13.73□□□□□ -0.21
GSK3B-204ENST00000474830 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
GSK3B-204ENST00000474830 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
GSK3B-204ENST00000474830 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
GSK3B-204ENST00000474830 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
GSK3B-204ENST00000474830 FKBP8Q14318 412 aa13.63□□□□□ -0.23
GSK3B-204ENST00000474830 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
GSK3B-204ENST00000474830 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
GSK3B-204ENST00000474830 GABBR2O75899 941 aa13.41□□□□□ -0.26
GSK3B-204ENST00000474830 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
GSK3B-204ENST00000474830 MIER1Q8N108 512 aa13.36□□□□□ -0.27
GSK3B-204ENST00000474830 ZRANB1Q9UGI0 708 aa13.34□□□□□ -0.27
GSK3B-204ENST00000474830 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
GSK3B-204ENST00000474830 CLCN6P51797 869 aa13.28□□□□□ -0.28
GSK3B-204ENST00000474830 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
GSK3B-204ENST00000474830 PLCD3Q8N3E9 789 aa13.26□□□□□ -0.29
GSK3B-204ENST00000474830 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
GSK3B-204ENST00000474830 PAK3O75914 559 aaPredicted RBP13.24□□□□□ -0.29
GSK3B-204ENST00000474830 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
GSK3B-204ENST00000474830 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
GSK3B-204ENST00000474830 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
GSK3B-204ENST00000474830 TSPYL2Q9H2G4 693 aaPredicted RBP13.16□□□□□ -0.3
GSK3B-204ENST00000474830 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
GSK3B-204ENST00000474830 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
GSK3B-204ENST00000474830 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms