RNA–Protein interactions for RNA: ENST00000474821.1

NBN-204, Transcript of nibrin, humanhuman

TSL 2

Gene NBN, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBN-204ENST00000474821 AEBP2Q6ZN18 517 aaPredicted RBP32.14■■■□□ 2.74
NBN-204ENST00000474821 CHIC1Q5VXU3 224 aa30.76■■■□□ 2.51
NBN-204ENST00000474821 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
NBN-204ENST00000474821 PHF23Q9BUL5 403 aaPredicted RBP27.04■■□□□ 1.92
NBN-204ENST00000474821 FOXD1Q16676 465 aa25.49■■□□□ 1.67
NBN-204ENST00000474821 PLPPR3Q6T4P5 718 aa24.67■■□□□ 1.54
NBN-204ENST00000474821 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
NBN-204ENST00000474821 ADRA2BP18089 450 aa23.89■■□□□ 1.41
NBN-204ENST00000474821 PIAS4Q8N2W9 510 aaPredicted RBP23.84■■□□□ 1.41
NBN-204ENST00000474821 MSH5O43196 834 aa23.79■■□□□ 1.4
NBN-204ENST00000474821 POTEDQ86YR6 584 aa22.81■■□□□ 1.24
NBN-204ENST00000474821 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
NBN-204ENST00000474821 MAPK8IP2Q13387 824 aaPredicted RBP21.88■■□□□ 1.09
NBN-204ENST00000474821 DMRT2Q9Y5R5 561 aa21.77■■□□□ 1.08
NBN-204ENST00000474821 PPP4R3CPQ6ZMV5 832 aa21.63■■□□□ 1.05
NBN-204ENST00000474821 CNKSR2Q8WXI2 1034 aa21.2■□□□□ 0.98
NBN-204ENST00000474821 HOXD11P31277 338 aaPredicted RBP21.08■□□□□ 0.97
NBN-204ENST00000474821 RNF216Q9NWF9 866 aaPredicted RBP20.97■□□□□ 0.95
NBN-204ENST00000474821 NCBP3Q53F19 620 aaKnown RBP20.88■□□□□ 0.93
NBN-204ENST00000474821 DCAF8L1A6NGE4 600 aa20.73■□□□□ 0.91
NBN-204ENST00000474821 NPM3O75607 178 aaKnown RBP20.57■□□□□ 0.88
NBN-204ENST00000474821 KCNA4P22459 653 aa20.39■□□□□ 0.85
NBN-204ENST00000474821 DNAJC5BQ9UF47 199 aa20.38■□□□□ 0.85
NBN-204ENST00000474821 RNF39Q9H2S5 420 aa20.33■□□□□ 0.85
NBN-204ENST00000474821 CACNB1Q02641 598 aaPredicted RBP20.21■□□□□ 0.83
NBN-204ENST00000474821 C1QBPQ07021 282 aaKnown RBP20.04■□□□□ 0.8
NBN-204ENST00000474821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.79
NBN-204ENST00000474821 U3KPZ7 1027 aaPredicted RBP19.65■□□□□ 0.74
NBN-204ENST00000474821 SLC4A2P04920 1241 aa19.61■□□□□ 0.73
NBN-204ENST00000474821 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
NBN-204ENST00000474821 SPINK5Q9NQ38 1064 aaPredicted RBP19.26■□□□□ 0.67
NBN-204ENST00000474821 CAPN15O75808 1086 aa19.19■□□□□ 0.66
NBN-204ENST00000474821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.18■□□□□ 0.66
NBN-204ENST00000474821 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
NBN-204ENST00000474821 APLP2Q06481 763 aa19.14■□□□□ 0.65
NBN-204ENST00000474821 DSG3P32926 999 aa19.09■□□□□ 0.65
NBN-204ENST00000474821 SAMD1Q6SPF0 538 aaPredicted RBP19.08■□□□□ 0.64
NBN-204ENST00000474821 MYCNP04198 464 aaPredicted RBP19.04■□□□□ 0.64
NBN-204ENST00000474821 ZNF219Q9P2Y4 722 aaPredicted RBP18.98■□□□□ 0.63
NBN-204ENST00000474821 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
NBN-204ENST00000474821 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
NBN-204ENST00000474821 ZBTB22O15209 634 aa18.76■□□□□ 0.59
NBN-204ENST00000474821 ABCB7O75027 752 aa18.76■□□□□ 0.59
NBN-204ENST00000474821 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
NBN-204ENST00000474821 ATF5Q9Y2D1 282 aaPredicted RBP18.55■□□□□ 0.56
NBN-204ENST00000474821 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
NBN-204ENST00000474821 POLA2Q14181 598 aa18.5■□□□□ 0.55
NBN-204ENST00000474821 ATXN8OSP0DMR3 200 aa18.4■□□□□ 0.54
NBN-204ENST00000474821 RBM42Q9BTD8 480 aaKnown RBP18.22■□□□□ 0.51
NBN-204ENST00000474821 ZBTB12Q9Y330 459 aaPredicted RBP18.21■□□□□ 0.51
NBN-204ENST00000474821 POTEHQ6S545 545 aa17.91■□□□□ 0.46
NBN-204ENST00000474821 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
NBN-204ENST00000474821 AKT1S1Q96B36 256 aa17.85■□□□□ 0.45
NBN-204ENST00000474821 FBLN2P98095 1184 aa17.81■□□□□ 0.44
NBN-204ENST00000474821 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
NBN-204ENST00000474821 CHRDL2Q6WN34 429 aa17.71■□□□□ 0.43
NBN-204ENST00000474821 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
NBN-204ENST00000474821 SPDYE6P0CI01 402 aa17.66■□□□□ 0.42
NBN-204ENST00000474821 SPDYE2Q495Y8 402 aa17.66■□□□□ 0.42
NBN-204ENST00000474821 REM2Q8IYK8 340 aaPredicted RBP17.66■□□□□ 0.42
NBN-204ENST00000474821 PITPNM1O00562 1244 aa17.47■□□□□ 0.39
NBN-204ENST00000474821 SSUH2Q9Y2M2 353 aa17.47■□□□□ 0.39
NBN-204ENST00000474821 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
NBN-204ENST00000474821 PIP4P2Q8N4L2 257 aa17.34■□□□□ 0.37
NBN-204ENST00000474821 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.36
NBN-204ENST00000474821 SPDYE1Q8NFV5 336 aaPredicted RBP17.27■□□□□ 0.36
NBN-204ENST00000474821 PABPN1Q86U42 306 aaKnown RBP eCLIP17.18■□□□□ 0.34
NBN-204ENST00000474821 CLEC11AQ9Y240 323 aa17.15■□□□□ 0.34
NBN-204ENST00000474821 PRKAR2AP13861 404 aaKnown RBP16.99■□□□□ 0.31
NBN-204ENST00000474821 SPDYE4A6NLX3 237 aa16.98■□□□□ 0.31
NBN-204ENST00000474821 PRR29P0C7W0 189 aa16.94■□□□□ 0.3
NBN-204ENST00000474821 HAX1O00165 279 aa16.91■□□□□ 0.3
NBN-204ENST00000474821 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
NBN-204ENST00000474821 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
NBN-204ENST00000474821 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
NBN-204ENST00000474821 EVX2Q03828 476 aa16.75■□□□□ 0.27
NBN-204ENST00000474821 FKBP8Q14318 412 aa16.75■□□□□ 0.27
NBN-204ENST00000474821 C19orf67A6NJJ6 358 aa16.74■□□□□ 0.27
NBN-204ENST00000474821 PROM2Q8N271 834 aa16.71■□□□□ 0.27
NBN-204ENST00000474821 FARP1Q9Y4F1 1045 aaPredicted RBP16.65■□□□□ 0.26
NBN-204ENST00000474821 CREBZFQ9NS37 354 aa16.62■□□□□ 0.25
NBN-204ENST00000474821 CD44P16070 742 aaKnown RBP16.47■□□□□ 0.23
NBN-204ENST00000474821 GABBR2O75899 941 aa16.4■□□□□ 0.22
NBN-204ENST00000474821 MNX1P50219 401 aaPredicted RBP16.39■□□□□ 0.21
NBN-204ENST00000474821 NPM1P06748 294 aaKnown RBP eCLIP16.3■□□□□ 0.2
NBN-204ENST00000474821 CLCN6P51797 869 aa16.29■□□□□ 0.2
NBN-204ENST00000474821 ZNF579Q8NAF0 562 aaKnown RBP16.29■□□□□ 0.2
NBN-204ENST00000474821 ZRANB1Q9UGI0 708 aa16.26■□□□□ 0.19
NBN-204ENST00000474821 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
NBN-204ENST00000474821 FBXO3Q9UK99 471 aa16.15■□□□□ 0.18
NBN-204ENST00000474821 MIER1Q8N108 512 aa16.13■□□□□ 0.17
NBN-204ENST00000474821 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
NBN-204ENST00000474821 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
NBN-204ENST00000474821 PHF12Q96QT6 1004 aa16.06■□□□□ 0.16
NBN-204ENST00000474821 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
NBN-204ENST00000474821 GALR2O43603 387 aaPredicted RBP16.01■□□□□ 0.15
NBN-204ENST00000474821 DCBLD2Q96PD2 775 aa15.97■□□□□ 0.15
NBN-204ENST00000474821 ZBTB47Q9UFB7 747 aaPredicted RBP15.97■□□□□ 0.15
NBN-204ENST00000474821 VASPP50552 380 aaPredicted RBP15.96■□□□□ 0.15
NBN-204ENST00000474821 CCDC61Q9Y6R9 512 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms