RNA–Protein interactions for RNA: ENST00000474375.6

RABGAP1L-213, Transcript of RAB GTPase activating protein 1 like, humanhuman

TSL 3

Gene RABGAP1L, Length 1,006 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1L-213ENST00000474375 AEBP2Q6ZN18 517 aaPredicted RBP33.55■■■□□ 2.96
RABGAP1L-213ENST00000474375 CHIC1Q5VXU3 224 aa31.73■■■□□ 2.67
RABGAP1L-213ENST00000474375 SENP3Q9H4L4 574 aaPredicted RBP28.73■■■□□ 2.19
RABGAP1L-213ENST00000474375 PHF23Q9BUL5 403 aaPredicted RBP28.33■■■□□ 2.13
RABGAP1L-213ENST00000474375 FOXD1Q16676 465 aa26.75■■□□□ 1.87
RABGAP1L-213ENST00000474375 PLPPR3Q6T4P5 718 aa25.32■■□□□ 1.64
RABGAP1L-213ENST00000474375 MSH5O43196 834 aa25.16■■□□□ 1.62
RABGAP1L-213ENST00000474375 PIAS4Q8N2W9 510 aaPredicted RBP25.01■■□□□ 1.59
RABGAP1L-213ENST00000474375 PPP6R1Q9UPN7 881 aa24.86■■□□□ 1.57
RABGAP1L-213ENST00000474375 ADRA2BP18089 450 aa24.81■■□□□ 1.56
RABGAP1L-213ENST00000474375 POTEDQ86YR6 584 aa24.81■■□□□ 1.56
RABGAP1L-213ENST00000474375 MAPK8IP2Q13387 824 aaPredicted RBP22.84■■□□□ 1.25
RABGAP1L-213ENST00000474375 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
RABGAP1L-213ENST00000474375 DMRT2Q9Y5R5 561 aa22.71■■□□□ 1.23
RABGAP1L-213ENST00000474375 PPP4R3CPQ6ZMV5 832 aa22.16■■□□□ 1.14
RABGAP1L-213ENST00000474375 DCAF8L1A6NGE4 600 aa21.93■■□□□ 1.1
RABGAP1L-213ENST00000474375 HOXD11P31277 338 aaPredicted RBP21.8■■□□□ 1.08
RABGAP1L-213ENST00000474375 CNKSR2Q8WXI2 1034 aa21.79■■□□□ 1.08
RABGAP1L-213ENST00000474375 CACNB1Q02641 598 aaPredicted RBP21.74■■□□□ 1.07
RABGAP1L-213ENST00000474375 RNF216Q9NWF9 866 aaPredicted RBP21.63■■□□□ 1.05
RABGAP1L-213ENST00000474375 RNF39Q9H2S5 420 aa21.4■■□□□ 1.02
RABGAP1L-213ENST00000474375 NCBP3Q53F19 620 aaKnown RBP21.32■■□□□ 1
RABGAP1L-213ENST00000474375 C1QBPQ07021 282 aaKnown RBP21.12■□□□□ 0.97
RABGAP1L-213ENST00000474375 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.97
RABGAP1L-213ENST00000474375 NPM3O75607 178 aaKnown RBP20.92■□□□□ 0.94
RABGAP1L-213ENST00000474375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.88■□□□□ 0.933e-6■■■■□ 20.1
RABGAP1L-213ENST00000474375 KCNA4P22459 653 aa20.36■□□□□ 0.85
RABGAP1L-213ENST00000474375 U3KPZ7 1027 aaPredicted RBP20.32■□□□□ 0.84
RABGAP1L-213ENST00000474375 CAPN15O75808 1086 aa20.16■□□□□ 0.82
RABGAP1L-213ENST00000474375 SPINK5Q9NQ38 1064 aaPredicted RBP20.1■□□□□ 0.81
RABGAP1L-213ENST00000474375 SLC4A2P04920 1241 aa20■□□□□ 0.79
RABGAP1L-213ENST00000474375 DSG3P32926 999 aa20■□□□□ 0.79
RABGAP1L-213ENST00000474375 APLP2Q06481 763 aa19.86■□□□□ 0.77
RABGAP1L-213ENST00000474375 TRHP20396 242 aaPredicted RBP19.79■□□□□ 0.76
RABGAP1L-213ENST00000474375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
RABGAP1L-213ENST00000474375 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
RABGAP1L-213ENST00000474375 ZNF219Q9P2Y4 722 aaPredicted RBP19.72■□□□□ 0.75
RABGAP1L-213ENST00000474375 ABCB7O75027 752 aa19.64■□□□□ 0.73
RABGAP1L-213ENST00000474375 SAMD1Q6SPF0 538 aaPredicted RBP19.64■□□□□ 0.73
RABGAP1L-213ENST00000474375 POTEHQ6S545 545 aa19.44■□□□□ 0.7
RABGAP1L-213ENST00000474375 MYCNP04198 464 aaPredicted RBP19.39■□□□□ 0.69
RABGAP1L-213ENST00000474375 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
RABGAP1L-213ENST00000474375 POLA2Q14181 598 aa19.19■□□□□ 0.66
RABGAP1L-213ENST00000474375 RBM42Q9BTD8 480 aaKnown RBP19.15■□□□□ 0.66
RABGAP1L-213ENST00000474375 FOXD4L1Q9NU39 408 aa19.09■□□□□ 0.65
RABGAP1L-213ENST00000474375 ATF5Q9Y2D1 282 aaPredicted RBP18.9■□□□□ 0.62
RABGAP1L-213ENST00000474375 ZBTB12Q9Y330 459 aaPredicted RBP18.8■□□□□ 0.6
RABGAP1L-213ENST00000474375 CHRDL2Q6WN34 429 aa18.77■□□□□ 0.6
RABGAP1L-213ENST00000474375 ZBTB22O15209 634 aa18.66■□□□□ 0.58
RABGAP1L-213ENST00000474375 AKT1S1Q96B36 256 aa18.65■□□□□ 0.58
RABGAP1L-213ENST00000474375 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
RABGAP1L-213ENST00000474375 ATXN8OSP0DMR3 200 aa18.52■□□□□ 0.56
RABGAP1L-213ENST00000474375 REM2Q8IYK8 340 aaPredicted RBP18.46■□□□□ 0.55
RABGAP1L-213ENST00000474375 FBLN2P98095 1184 aa18.29■□□□□ 0.52
RABGAP1L-213ENST00000474375 PIP4P2Q8N4L2 257 aa18.26■□□□□ 0.51
RABGAP1L-213ENST00000474375 PITPNM1O00562 1244 aa18.24■□□□□ 0.51
RABGAP1L-213ENST00000474375 SPDYE2BA6NHP3 402 aa18.18■□□□□ 0.5
RABGAP1L-213ENST00000474375 SPDYE6P0CI01 402 aa18.18■□□□□ 0.5
RABGAP1L-213ENST00000474375 SPDYE2Q495Y8 402 aa18.18■□□□□ 0.5
RABGAP1L-213ENST00000474375 SP7Q8TDD2 431 aaPredicted RBP18.14■□□□□ 0.49
RABGAP1L-213ENST00000474375 FXR2P51116 673 aaKnown RBP eCLIP18.12■□□□□ 0.49
RABGAP1L-213ENST00000474375 HAX1O00165 279 aa18.07■□□□□ 0.48
RABGAP1L-213ENST00000474375 MKRN4PQ13434 485 aaPredicted RBP18.01■□□□□ 0.47
RABGAP1L-213ENST00000474375 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
RABGAP1L-213ENST00000474375 CLEC11AQ9Y240 323 aa17.96■□□□□ 0.47
RABGAP1L-213ENST00000474375 SPDYE1Q8NFV5 336 aaPredicted RBP17.93■□□□□ 0.46
RABGAP1L-213ENST00000474375 SSUH2Q9Y2M2 353 aa17.86■□□□□ 0.45
RABGAP1L-213ENST00000474375 PRKAR2AP13861 404 aaKnown RBP17.82■□□□□ 0.44
RABGAP1L-213ENST00000474375 EVX2Q03828 476 aa17.71■□□□□ 0.43
RABGAP1L-213ENST00000474375 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
RABGAP1L-213ENST00000474375 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
RABGAP1L-213ENST00000474375 PRR29P0C7W0 189 aa17.62■□□□□ 0.41
RABGAP1L-213ENST00000474375 CHADLQ6NUI6 762 aa17.57■□□□□ 0.4
RABGAP1L-213ENST00000474375 C19orf67A6NJJ6 358 aa17.55■□□□□ 0.4
RABGAP1L-213ENST00000474375 EHMT2Q96KQ7 1210 aa17.48■□□□□ 0.39
RABGAP1L-213ENST00000474375 GABBR2O75899 941 aa17.36■□□□□ 0.37
RABGAP1L-213ENST00000474375 FARP1Q9Y4F1 1045 aaPredicted RBP17.29■□□□□ 0.36
RABGAP1L-213ENST00000474375 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
RABGAP1L-213ENST00000474375 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
RABGAP1L-213ENST00000474375 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
RABGAP1L-213ENST00000474375 CLCN6P51797 869 aa17.06■□□□□ 0.32
RABGAP1L-213ENST00000474375 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
RABGAP1L-213ENST00000474375 LHX8Q68G74 356 aa17.04■□□□□ 0.32
RABGAP1L-213ENST00000474375 ZRANB1Q9UGI0 708 aa16.99■□□□□ 0.31
RABGAP1L-213ENST00000474375 DCBLD2Q96PD2 775 aa16.93■□□□□ 0.3
RABGAP1L-213ENST00000474375 POTEIP0CG38 1075 aa16.92■□□□□ 0.3
RABGAP1L-213ENST00000474375 ZNF579Q8NAF0 562 aaKnown RBP16.92■□□□□ 0.3
RABGAP1L-213ENST00000474375 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
RABGAP1L-213ENST00000474375 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
RABGAP1L-213ENST00000474375 GALR2O43603 387 aaPredicted RBP16.74■□□□□ 0.27
RABGAP1L-213ENST00000474375 PHF12Q96QT6 1004 aa16.7■□□□□ 0.26
RABGAP1L-213ENST00000474375 MNX1P50219 401 aaPredicted RBP16.69■□□□□ 0.26
RABGAP1L-213ENST00000474375 PROM2Q8N271 834 aa16.6■□□□□ 0.25
RABGAP1L-213ENST00000474375 TSPYL2Q9H2G4 693 aaPredicted RBP16.51■□□□□ 0.23
RABGAP1L-213ENST00000474375 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
RABGAP1L-213ENST00000474375 MS4A3Q96HJ5 214 aa16.46■□□□□ 0.23
RABGAP1L-213ENST00000474375 MIER1Q8N108 512 aa16.44■□□□□ 0.22
RABGAP1L-213ENST00000474375 PELP1Q8IZL8 1130 aaKnown RBP16.41■□□□□ 0.22
RABGAP1L-213ENST00000474375 POTEB2H3BUK9 544 aa16.37■□□□□ 0.21
RABGAP1L-213ENST00000474375 ASTLQ6HA08 431 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms