RNA–Protein interactions for RNA: ENST00000474354.1

NRXN1-216, Transcript of neurexin 1, humanhuman

TSL 4

Gene NRXN1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-216ENST00000474354 AEBP2Q6ZN18 517 aaPredicted RBP27.16■■□□□ 1.94
NRXN1-216ENST00000474354 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
NRXN1-216ENST00000474354 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
NRXN1-216ENST00000474354 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
NRXN1-216ENST00000474354 FOXD1Q16676 465 aa21.52■■□□□ 1.04
NRXN1-216ENST00000474354 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
NRXN1-216ENST00000474354 POTEDQ86YR6 584 aa21.06■□□□□ 0.96
NRXN1-216ENST00000474354 PPP6R1Q9UPN7 881 aa20.38■□□□□ 0.85
NRXN1-216ENST00000474354 MSH5O43196 834 aa20.37■□□□□ 0.85
NRXN1-216ENST00000474354 ADRA2BP18089 450 aa20.34■□□□□ 0.85
NRXN1-216ENST00000474354 PIAS4Q8N2W9 510 aaPredicted RBP20.21■□□□□ 0.83
NRXN1-216ENST00000474354 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
NRXN1-216ENST00000474354 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
NRXN1-216ENST00000474354 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
NRXN1-216ENST00000474354 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
NRXN1-216ENST00000474354 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
NRXN1-216ENST00000474354 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
NRXN1-216ENST00000474354 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
NRXN1-216ENST00000474354 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
NRXN1-216ENST00000474354 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
NRXN1-216ENST00000474354 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
NRXN1-216ENST00000474354 KCNA4P22459 653 aa17.65■□□□□ 0.42
NRXN1-216ENST00000474354 DCAF8L1A6NGE4 600 aa17.63■□□□□ 0.41
NRXN1-216ENST00000474354 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
NRXN1-216ENST00000474354 RNF39Q9H2S5 420 aa17.22■□□□□ 0.35
NRXN1-216ENST00000474354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
NRXN1-216ENST00000474354 C1QBPQ07021 282 aaKnown RBP17■□□□□ 0.31
NRXN1-216ENST00000474354 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
NRXN1-216ENST00000474354 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.28
NRXN1-216ENST00000474354 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
NRXN1-216ENST00000474354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
NRXN1-216ENST00000474354 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
NRXN1-216ENST00000474354 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
NRXN1-216ENST00000474354 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
NRXN1-216ENST00000474354 APLP2Q06481 763 aa16.38■□□□□ 0.21
NRXN1-216ENST00000474354 POTEHQ6S545 545 aa16.38■□□□□ 0.21
NRXN1-216ENST00000474354 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
NRXN1-216ENST00000474354 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
NRXN1-216ENST00000474354 CAPN15O75808 1086 aa16.33■□□□□ 0.2
NRXN1-216ENST00000474354 ZBTB22O15209 634 aa16.21■□□□□ 0.19
NRXN1-216ENST00000474354 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
NRXN1-216ENST00000474354 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
NRXN1-216ENST00000474354 DSG3P32926 999 aa16.14■□□□□ 0.17
NRXN1-216ENST00000474354 ABCB7O75027 752 aa15.96■□□□□ 0.15
NRXN1-216ENST00000474354 ATF5Q9Y2D1 282 aaPredicted RBP15.9■□□□□ 0.14
NRXN1-216ENST00000474354 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
NRXN1-216ENST00000474354 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
NRXN1-216ENST00000474354 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
NRXN1-216ENST00000474354 POLA2Q14181 598 aa15.8■□□□□ 0.12
NRXN1-216ENST00000474354 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
NRXN1-216ENST00000474354 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
NRXN1-216ENST00000474354 FBLN2P98095 1184 aa15.33■□□□□ 0.04
NRXN1-216ENST00000474354 OSCARQ8IYS5 282 aa15.27■□□□□ 0.04
NRXN1-216ENST00000474354 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
NRXN1-216ENST00000474354 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
NRXN1-216ENST00000474354 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
NRXN1-216ENST00000474354 SPDYE2BA6NHP3 402 aa15.1■□□□□ 0.01
NRXN1-216ENST00000474354 SPDYE6P0CI01 402 aa15.1■□□□□ 0.01
NRXN1-216ENST00000474354 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
NRXN1-216ENST00000474354 SP7Q8TDD2 431 aaPredicted RBP15.01□□□□□ -0.01
NRXN1-216ENST00000474354 REM2Q8IYK8 340 aaPredicted RBP14.98□□□□□ -0.01
NRXN1-216ENST00000474354 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
NRXN1-216ENST00000474354 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
NRXN1-216ENST00000474354 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
NRXN1-216ENST00000474354 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
NRXN1-216ENST00000474354 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
NRXN1-216ENST00000474354 SPDYE4A6NLX3 237 aa14.71□□□□□ -0.05
NRXN1-216ENST00000474354 CLEC11AQ9Y240 323 aa14.67□□□□□ -0.06
NRXN1-216ENST00000474354 PIP4P2Q8N4L2 257 aa14.63□□□□□ -0.07
NRXN1-216ENST00000474354 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
NRXN1-216ENST00000474354 HAX1O00165 279 aa14.52□□□□□ -0.09
NRXN1-216ENST00000474354 PRR29P0C7W0 189 aa14.5□□□□□ -0.09
NRXN1-216ENST00000474354 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
NRXN1-216ENST00000474354 PRKAR2AP13861 404 aaKnown RBP14.44□□□□□ -0.1
NRXN1-216ENST00000474354 PROM2Q8N271 834 aa14.42□□□□□ -0.1
NRXN1-216ENST00000474354 FKBP8Q14318 412 aa14.34□□□□□ -0.11
NRXN1-216ENST00000474354 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
NRXN1-216ENST00000474354 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
NRXN1-216ENST00000474354 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
NRXN1-216ENST00000474354 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
NRXN1-216ENST00000474354 EVX2Q03828 476 aa14.13□□□□□ -0.15
NRXN1-216ENST00000474354 LHX8Q68G74 356 aa14.04□□□□□ -0.16
NRXN1-216ENST00000474354 CD44P16070 742 aaKnown RBP14.01□□□□□ -0.17
NRXN1-216ENST00000474354 MNX1P50219 401 aaPredicted RBP14.01□□□□□ -0.17
NRXN1-216ENST00000474354 PLEKHG5O94827 1062 aa14□□□□□ -0.17
NRXN1-216ENST00000474354 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
NRXN1-216ENST00000474354 MIER1Q8N108 512 aa13.99□□□□□ -0.17
NRXN1-216ENST00000474354 FBXO3Q9UK99 471 aa13.99□□□□□ -0.17
NRXN1-216ENST00000474354 PLCD3Q8N3E9 789 aa13.93□□□□□ -0.18
NRXN1-216ENST00000474354 GABBR2O75899 941 aa13.91□□□□□ -0.18
NRXN1-216ENST00000474354 PAK3O75914 559 aaPredicted RBP13.87□□□□□ -0.19
NRXN1-216ENST00000474354 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
NRXN1-216ENST00000474354 ZBTB47Q9UFB7 747 aaPredicted RBP13.85□□□□□ -0.19
NRXN1-216ENST00000474354 CLCN6P51797 869 aa13.82□□□□□ -0.2
NRXN1-216ENST00000474354 ZNF579Q8NAF0 562 aaKnown RBP13.82□□□□□ -0.2
NRXN1-216ENST00000474354 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
NRXN1-216ENST00000474354 PLSCR2Q9NRY7 297 aa13.74□□□□□ -0.21
NRXN1-216ENST00000474354 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
NRXN1-216ENST00000474354 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
NRXN1-216ENST00000474354 PHF12Q96QT6 1004 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 429.7 ms