RNA–Protein interactions for RNA: ENST00000474331.1

CKAP2L-204, Transcript of cytoskeleton associated protein 2 like, humanhuman

TSL 2

Gene CKAP2L, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2L-204ENST00000474331 AEBP2Q6ZN18 517 aaPredicted RBP19.93■□□□□ 0.78
CKAP2L-204ENST00000474331 CHIC1Q5VXU3 224 aa18.67■□□□□ 0.58
CKAP2L-204ENST00000474331 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
CKAP2L-204ENST00000474331 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
CKAP2L-204ENST00000474331 FOXD1Q16676 465 aa15.85■□□□□ 0.13
CKAP2L-204ENST00000474331 POTEDQ86YR6 584 aa14.84□□□□□ -0.03
CKAP2L-204ENST00000474331 MSH5O43196 834 aa14.8□□□□□ -0.04
CKAP2L-204ENST00000474331 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
CKAP2L-204ENST00000474331 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
CKAP2L-204ENST00000474331 PIAS4Q8N2W9 510 aaPredicted RBP14.69□□□□□ -0.06
CKAP2L-204ENST00000474331 ADRA2BP18089 450 aa14.63□□□□□ -0.07
CKAP2L-204ENST00000474331 MAPK8IP2Q13387 824 aaPredicted RBP13.52□□□□□ -0.25
CKAP2L-204ENST00000474331 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
CKAP2L-204ENST00000474331 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
CKAP2L-204ENST00000474331 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
CKAP2L-204ENST00000474331 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
CKAP2L-204ENST00000474331 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
CKAP2L-204ENST00000474331 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
CKAP2L-204ENST00000474331 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
CKAP2L-204ENST00000474331 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
CKAP2L-204ENST00000474331 RNF216Q9NWF9 866 aaPredicted RBP12.68□□□□□ -0.38
CKAP2L-204ENST00000474331 C1QBPQ07021 282 aaKnown RBP12.43□□□□□ -0.42
CKAP2L-204ENST00000474331 DNAJC5BQ9UF47 199 aa12.42□□□□□ -0.42
CKAP2L-204ENST00000474331 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
CKAP2L-204ENST00000474331 NPM3O75607 178 aaKnown RBP12.26□□□□□ -0.45
CKAP2L-204ENST00000474331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
CKAP2L-204ENST00000474331 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
CKAP2L-204ENST00000474331 KCNA4P22459 653 aa11.87□□□□□ -0.51
CKAP2L-204ENST00000474331 SPINK5Q9NQ38 1064 aaPredicted RBP11.87□□□□□ -0.51
CKAP2L-204ENST00000474331 DSG3P32926 999 aa11.82□□□□□ -0.52
CKAP2L-204ENST00000474331 SLC4A2P04920 1241 aa11.8□□□□□ -0.52
CKAP2L-204ENST00000474331 CAPN15O75808 1086 aa11.76□□□□□ -0.53
CKAP2L-204ENST00000474331 POTEHQ6S545 545 aa11.56□□□□□ -0.56
CKAP2L-204ENST00000474331 TRHP20396 242 aaPredicted RBP11.54□□□□□ -0.56
CKAP2L-204ENST00000474331 ABCB7O75027 752 aa11.52□□□□□ -0.57
CKAP2L-204ENST00000474331 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
CKAP2L-204ENST00000474331 APLP2Q06481 763 aa11.45□□□□□ -0.58
CKAP2L-204ENST00000474331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
CKAP2L-204ENST00000474331 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
CKAP2L-204ENST00000474331 SAMD1Q6SPF0 538 aaPredicted RBP11.4□□□□□ -0.58
CKAP2L-204ENST00000474331 MYCNP04198 464 aaPredicted RBP11.27□□□□□ -0.61
CKAP2L-204ENST00000474331 POLA2Q14181 598 aa11.22□□□□□ -0.61
CKAP2L-204ENST00000474331 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
CKAP2L-204ENST00000474331 ATF5Q9Y2D1 282 aaPredicted RBP11.15□□□□□ -0.62
CKAP2L-204ENST00000474331 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
CKAP2L-204ENST00000474331 CHRDL2Q6WN34 429 aa11.07□□□□□ -0.64
CKAP2L-204ENST00000474331 FOXD4L1Q9NU39 408 aa11.07□□□□□ -0.64
CKAP2L-204ENST00000474331 ZBTB22O15209 634 aa10.97□□□□□ -0.65
CKAP2L-204ENST00000474331 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
CKAP2L-204ENST00000474331 ZBTB12Q9Y330 459 aaPredicted RBP10.9□□□□□ -0.66
CKAP2L-204ENST00000474331 OSCARQ8IYS5 282 aa10.89□□□□□ -0.67
CKAP2L-204ENST00000474331 REM2Q8IYK8 340 aaPredicted RBP10.87□□□□□ -0.67
CKAP2L-204ENST00000474331 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
CKAP2L-204ENST00000474331 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
CKAP2L-204ENST00000474331 SP7Q8TDD2 431 aaPredicted RBP10.75□□□□□ -0.69
CKAP2L-204ENST00000474331 ATXN8OSP0DMR3 200 aa10.74□□□□□ -0.69
CKAP2L-204ENST00000474331 FXR2P51116 673 aaKnown RBP eCLIP10.71□□□□□ -0.69
CKAP2L-204ENST00000474331 MKRN4PQ13434 485 aaPredicted RBP10.62□□□□□ -0.71
CKAP2L-204ENST00000474331 SPDYE2BA6NHP3 402 aa10.59□□□□□ -0.71
CKAP2L-204ENST00000474331 SPDYE6P0CI01 402 aa10.59□□□□□ -0.71
CKAP2L-204ENST00000474331 SPDYE2Q495Y8 402 aa10.59□□□□□ -0.71
CKAP2L-204ENST00000474331 HAX1O00165 279 aa10.58□□□□□ -0.72
CKAP2L-204ENST00000474331 EVX2Q03828 476 aa10.58□□□□□ -0.72
CKAP2L-204ENST00000474331 FBLN2P98095 1184 aa10.56□□□□□ -0.72
CKAP2L-204ENST00000474331 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
CKAP2L-204ENST00000474331 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
CKAP2L-204ENST00000474331 SPDYE1Q8NFV5 336 aaPredicted RBP10.44□□□□□ -0.74
CKAP2L-204ENST00000474331 ZNF692Q9BU19 519 aaPredicted RBP10.43□□□□□ -0.74
CKAP2L-204ENST00000474331 CLEC11AQ9Y240 323 aa10.42□□□□□ -0.74
CKAP2L-204ENST00000474331 C19orf67A6NJJ6 358 aa10.37□□□□□ -0.75
CKAP2L-204ENST00000474331 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
CKAP2L-204ENST00000474331 PABPN1Q86U42 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
CKAP2L-204ENST00000474331 GABBR2O75899 941 aa10.26□□□□□ -0.77
CKAP2L-204ENST00000474331 CSRNP3Q8WYN3 585 aa10.26□□□□□ -0.77
CKAP2L-204ENST00000474331 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
CKAP2L-204ENST00000474331 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
CKAP2L-204ENST00000474331 POTEIP0CG38 1075 aa10.11□□□□□ -0.79
CKAP2L-204ENST00000474331 CD44P16070 742 aaKnown RBP10.08□□□□□ -0.8
CKAP2L-204ENST00000474331 LHX8Q68G74 356 aa10.07□□□□□ -0.8
CKAP2L-204ENST00000474331 EHMT2Q96KQ7 1210 aa10.05□□□□□ -0.8
CKAP2L-204ENST00000474331 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
CKAP2L-204ENST00000474331 ZNF579Q8NAF0 562 aaKnown RBP9.95□□□□□ -0.82
CKAP2L-204ENST00000474331 SPDYE4A6NLX3 237 aa9.93□□□□□ -0.82
CKAP2L-204ENST00000474331 CLCN6P51797 869 aa9.93□□□□□ -0.82
CKAP2L-204ENST00000474331 ZRANB1Q9UGI0 708 aa9.91□□□□□ -0.82
CKAP2L-204ENST00000474331 STAG3Q9UJ98 1225 aa9.91□□□□□ -0.82
CKAP2L-204ENST00000474331 GALR2O43603 387 aaPredicted RBP9.87□□□□□ -0.83
CKAP2L-204ENST00000474331 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
CKAP2L-204ENST00000474331 DCBLD2Q96PD2 775 aa9.85□□□□□ -0.83
CKAP2L-204ENST00000474331 PHF12Q96QT6 1004 aa9.81□□□□□ -0.84
CKAP2L-204ENST00000474331 POTEB2H3BUK9 544 aa9.77□□□□□ -0.85
CKAP2L-204ENST00000474331 PROM2Q8N271 834 aa9.75□□□□□ -0.85
CKAP2L-204ENST00000474331 PELP1Q8IZL8 1130 aaKnown RBP9.74□□□□□ -0.85
CKAP2L-204ENST00000474331 OTUD5Q96G74 571 aa9.73□□□□□ -0.85
CKAP2L-204ENST00000474331 NPM1P06748 294 aaKnown RBP eCLIP9.71□□□□□ -0.86
CKAP2L-204ENST00000474331 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
CKAP2L-204ENST00000474331 MS4A3Q96HJ5 214 aa9.66□□□□□ -0.86
CKAP2L-204ENST00000474331 ASTLQ6HA08 431 aaPredicted RBP9.64□□□□□ -0.87
CKAP2L-204ENST00000474331 POTEJP0CG39 1038 aa9.63□□□□□ -0.87
CKAP2L-204ENST00000474331 ATMINO43313 823 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms