RNA–Protein interactions for RNA: ENST00000474274.1

PDS5B-205, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 2

Gene PDS5B, Length 797 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-205ENST00000474274 AEBP2Q6ZN18 517 aaPredicted RBP30.27■■■□□ 2.44
PDS5B-205ENST00000474274 CHIC1Q5VXU3 224 aa28.67■■■□□ 2.18
PDS5B-205ENST00000474274 SENP3Q9H4L4 574 aaPredicted RBP25.95■■□□□ 1.74
PDS5B-205ENST00000474274 PHF23Q9BUL5 403 aaPredicted RBP25.53■■□□□ 1.68
PDS5B-205ENST00000474274 FOXD1Q16676 465 aa24.13■■□□□ 1.45
PDS5B-205ENST00000474274 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
PDS5B-205ENST00000474274 MSH5O43196 834 aa22.73■■□□□ 1.23
PDS5B-205ENST00000474274 PIAS4Q8N2W9 510 aaPredicted RBP22.54■■□□□ 1.2
PDS5B-205ENST00000474274 PPP6R1Q9UPN7 881 aa22.39■■□□□ 1.17
PDS5B-205ENST00000474274 POTEDQ86YR6 584 aa22.37■■□□□ 1.17
PDS5B-205ENST00000474274 ADRA2BP18089 450 aa22.32■■□□□ 1.16
PDS5B-205ENST00000474274 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
PDS5B-205ENST00000474274 DMRT2Q9Y5R5 561 aa20.54■□□□□ 0.88
PDS5B-205ENST00000474274 MAPK8IP2Q13387 824 aaPredicted RBP20.53■□□□□ 0.88
PDS5B-205ENST00000474274 PPP4R3CPQ6ZMV5 832 aa19.98■□□□□ 0.79
PDS5B-205ENST00000474274 HOXD11P31277 338 aaPredicted RBP19.73■□□□□ 0.75
PDS5B-205ENST00000474274 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
PDS5B-205ENST00000474274 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
PDS5B-205ENST00000474274 RNF216Q9NWF9 866 aaPredicted RBP19.56■□□□□ 0.72
PDS5B-205ENST00000474274 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
PDS5B-205ENST00000474274 RNF39Q9H2S5 420 aa19.34■□□□□ 0.69
PDS5B-205ENST00000474274 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
PDS5B-205ENST00000474274 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
PDS5B-205ENST00000474274 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
PDS5B-205ENST00000474274 NPM3O75607 178 aaKnown RBP18.88■□□□□ 0.61
PDS5B-205ENST00000474274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.6
PDS5B-205ENST00000474274 KCNA4P22459 653 aa18.35■□□□□ 0.53
PDS5B-205ENST00000474274 U3KPZ7 1027 aaPredicted RBP18.35■□□□□ 0.53
PDS5B-205ENST00000474274 CAPN15O75808 1086 aa18.11■□□□□ 0.49
PDS5B-205ENST00000474274 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
PDS5B-205ENST00000474274 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
PDS5B-205ENST00000474274 DSG3P32926 999 aa18.05■□□□□ 0.48
PDS5B-205ENST00000474274 APLP2Q06481 763 aa17.95■□□□□ 0.46
PDS5B-205ENST00000474274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
PDS5B-205ENST00000474274 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
PDS5B-205ENST00000474274 ZNF219Q9P2Y4 722 aaPredicted RBP17.82■□□□□ 0.44
PDS5B-205ENST00000474274 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.44
PDS5B-205ENST00000474274 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
PDS5B-205ENST00000474274 ABCB7O75027 752 aa17.64■□□□□ 0.41
PDS5B-205ENST00000474274 MYCNP04198 464 aaPredicted RBP17.52■□□□□ 0.4
PDS5B-205ENST00000474274 POTEHQ6S545 545 aa17.51■□□□□ 0.39
PDS5B-205ENST00000474274 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
PDS5B-205ENST00000474274 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
PDS5B-205ENST00000474274 POLA2Q14181 598 aa17.26■□□□□ 0.35
PDS5B-205ENST00000474274 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
PDS5B-205ENST00000474274 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.32
PDS5B-205ENST00000474274 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
PDS5B-205ENST00000474274 CHRDL2Q6WN34 429 aa16.92■□□□□ 0.3
PDS5B-205ENST00000474274 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
PDS5B-205ENST00000474274 ZBTB22O15209 634 aa16.84■□□□□ 0.29
PDS5B-205ENST00000474274 ATXN8OSP0DMR3 200 aa16.77■□□□□ 0.28
PDS5B-205ENST00000474274 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
PDS5B-205ENST00000474274 REM2Q8IYK8 340 aaPredicted RBP16.64■□□□□ 0.25
PDS5B-205ENST00000474274 FBLN2P98095 1184 aa16.49■□□□□ 0.23
PDS5B-205ENST00000474274 PIP4P2Q8N4L2 257 aa16.47■□□□□ 0.23
PDS5B-205ENST00000474274 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
PDS5B-205ENST00000474274 SPDYE2BA6NHP3 402 aa16.43■□□□□ 0.22
PDS5B-205ENST00000474274 SPDYE6P0CI01 402 aa16.43■□□□□ 0.22
PDS5B-205ENST00000474274 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
PDS5B-205ENST00000474274 FXR2P51116 673 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■■■■□ 25.3
PDS5B-205ENST00000474274 SP7Q8TDD2 431 aaPredicted RBP16.36■□□□□ 0.21
PDS5B-205ENST00000474274 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
PDS5B-205ENST00000474274 HAX1O00165 279 aa16.21■□□□□ 0.19
PDS5B-205ENST00000474274 SPDYE1Q8NFV5 336 aaPredicted RBP16.18■□□□□ 0.18
PDS5B-205ENST00000474274 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
PDS5B-205ENST00000474274 SSUH2Q9Y2M2 353 aa16.17■□□□□ 0.18
PDS5B-205ENST00000474274 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
PDS5B-205ENST00000474274 PRKAR2AP13861 404 aaKnown RBP16.03■□□□□ 0.16
PDS5B-205ENST00000474274 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
PDS5B-205ENST00000474274 EVX2Q03828 476 aa15.93■□□□□ 0.14
PDS5B-205ENST00000474274 PABPN1Q86U42 306 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDS5B-205ENST00000474274 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
PDS5B-205ENST00000474274 PRR29P0C7W0 189 aa15.85■□□□□ 0.13
PDS5B-205ENST00000474274 CHADLQ6NUI6 762 aa15.77■□□□□ 0.12
PDS5B-205ENST00000474274 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
PDS5B-205ENST00000474274 GABBR2O75899 941 aa15.63■□□□□ 0.09
PDS5B-205ENST00000474274 FARP1Q9Y4F1 1045 aaPredicted RBP15.58■□□□□ 0.08
PDS5B-205ENST00000474274 CD44P16070 742 aaKnown RBP15.53■□□□□ 0.08
PDS5B-205ENST00000474274 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
PDS5B-205ENST00000474274 SPDYE4A6NLX3 237 aa15.46■□□□□ 0.07
PDS5B-205ENST00000474274 CLCN6P51797 869 aa15.46■□□□□ 0.07
PDS5B-205ENST00000474274 CREBZFQ9NS37 354 aa15.39■□□□□ 0.05
PDS5B-205ENST00000474274 LHX8Q68G74 356 aa15.33■□□□□ 0.04
PDS5B-205ENST00000474274 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
PDS5B-205ENST00000474274 ZRANB1Q9UGI0 708 aa15.28■□□□□ 0.04
PDS5B-205ENST00000474274 POTEIP0CG38 1075 aa15.26■□□□□ 0.03
PDS5B-205ENST00000474274 DCBLD2Q96PD2 775 aa15.21■□□□□ 0.03
PDS5B-205ENST00000474274 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
PDS5B-205ENST00000474274 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
PDS5B-205ENST00000474274 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
PDS5B-205ENST00000474274 PROM2Q8N271 834 aa15.08■□□□□ 0
PDS5B-205ENST00000474274 GALR2O43603 387 aaPredicted RBP15.07■□□□□ 0
PDS5B-205ENST00000474274 PHF12Q96QT6 1004 aa15.02■□□□□ -0
PDS5B-205ENST00000474274 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
PDS5B-205ENST00000474274 MS4A3Q96HJ5 214 aa14.84□□□□□ -0.03
PDS5B-205ENST00000474274 ASTLQ6HA08 431 aaPredicted RBP14.8□□□□□ -0.04
PDS5B-205ENST00000474274 TSPYL2Q9H2G4 693 aaPredicted RBP14.8□□□□□ -0.04
PDS5B-205ENST00000474274 CCDC61Q9Y6R9 512 aa14.78□□□□□ -0.04
PDS5B-205ENST00000474274 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.05
PDS5B-205ENST00000474274 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms