RNA–Protein interactions for RNA: ENST00000474094.1

CD109-204, Transcript of CD109 molecule, humanhuman

TSL 3

Gene CD109, Length 341 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-204ENST00000474094 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
CD109-204ENST00000474094 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
CD109-204ENST00000474094 SENP3Q9H4L4 574 aaPredicted RBP13.05□□□□□ -0.32
CD109-204ENST00000474094 PHF23Q9BUL5 403 aaPredicted RBP12.81□□□□□ -0.36
CD109-204ENST00000474094 FOXD1Q16676 465 aa12.09□□□□□ -0.47
CD109-204ENST00000474094 PLPPR3Q6T4P5 718 aa11.49□□□□□ -0.57
CD109-204ENST00000474094 MSH5O43196 834 aa11.45□□□□□ -0.58
CD109-204ENST00000474094 PIAS4Q8N2W9 510 aaPredicted RBP11.28□□□□□ -0.6
CD109-204ENST00000474094 POTEDQ86YR6 584 aa11.21□□□□□ -0.61
CD109-204ENST00000474094 PPP6R1Q9UPN7 881 aa11.19□□□□□ -0.62
CD109-204ENST00000474094 ADRA2BP18089 450 aa11.15□□□□□ -0.62
CD109-204ENST00000474094 SCAF1Q9H7N4 1312 aaKnown RBP10.39□□□□□ -0.75
CD109-204ENST00000474094 DMRT2Q9Y5R5 561 aa10.31□□□□□ -0.76
CD109-204ENST00000474094 MAPK8IP2Q13387 824 aaPredicted RBP10.25□□□□□ -0.77
CD109-204ENST00000474094 PPP4R3CPQ6ZMV5 832 aa10.01□□□□□ -0.81
CD109-204ENST00000474094 HOXD11P31277 338 aaPredicted RBP9.92□□□□□ -0.82
CD109-204ENST00000474094 CNKSR2Q8WXI2 1034 aa9.89□□□□□ -0.83
CD109-204ENST00000474094 RNF216Q9NWF9 866 aaPredicted RBP9.83□□□□□ -0.84
CD109-204ENST00000474094 DCAF8L1A6NGE4 600 aa9.82□□□□□ -0.84
CD109-204ENST00000474094 CACNB1Q02641 598 aaPredicted RBP9.81□□□□□ -0.84
CD109-204ENST00000474094 RNF39Q9H2S5 420 aa9.71□□□□□ -0.86
CD109-204ENST00000474094 DNAJC5BQ9UF47 199 aa9.71□□□□□ -0.86
CD109-204ENST00000474094 NCBP3Q53F19 620 aaKnown RBP9.7□□□□□ -0.86
CD109-204ENST00000474094 C1QBPQ07021 282 aaKnown RBP9.63□□□□□ -0.87
CD109-204ENST00000474094 NPM3O75607 178 aaKnown RBP9.44□□□□□ -0.9
CD109-204ENST00000474094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.42□□□□□ -0.9
CD109-204ENST00000474094 U3KPZ7 1027 aaPredicted RBP9.17□□□□□ -0.94
CD109-204ENST00000474094 KCNA4P22459 653 aa9.14□□□□□ -0.95
CD109-204ENST00000474094 APLP2Q06481 763 aa9.09□□□□□ -0.95
CD109-204ENST00000474094 CAPN15O75808 1086 aa9.07□□□□□ -0.96
CD109-204ENST00000474094 DSG3P32926 999 aa9.05□□□□□ -0.96
CD109-204ENST00000474094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.03□□□□□ -0.96
CD109-204ENST00000474094 HNRNPUL2Q1KMD3 747 aaKnown RBP9.03□□□□□ -0.96
CD109-204ENST00000474094 SPINK5Q9NQ38 1064 aaPredicted RBP9.03□□□□□ -0.96
CD109-204ENST00000474094 SLC4A2P04920 1241 aa9.02□□□□□ -0.97
CD109-204ENST00000474094 ZNF219Q9P2Y4 722 aaPredicted RBP8.96□□□□□ -0.98
CD109-204ENST00000474094 SAMD1Q6SPF0 538 aaPredicted RBP8.94□□□□□ -0.98
CD109-204ENST00000474094 TRHP20396 242 aaPredicted RBP8.89□□□□□ -0.99
CD109-204ENST00000474094 MYCNP04198 464 aaPredicted RBP8.8□□□□□ -1
CD109-204ENST00000474094 POTEHQ6S545 545 aa8.8□□□□□ -1
CD109-204ENST00000474094 ABCB7O75027 752 aa8.79□□□□□ -1
CD109-204ENST00000474094 RBM42Q9BTD8 480 aaKnown RBP8.73□□□□□ -1.01
CD109-204ENST00000474094 SLC4A1APQ9BWU0 796 aaKnown RBP8.67□□□□□ -1.02
CD109-204ENST00000474094 POLA2Q14181 598 aa8.65□□□□□ -1.02
CD109-204ENST00000474094 FOXD4L1Q9NU39 408 aa8.64□□□□□ -1.03
CD109-204ENST00000474094 ZBTB12Q9Y330 459 aaPredicted RBP8.58□□□□□ -1.04
CD109-204ENST00000474094 CHRDL2Q6WN34 429 aa8.48□□□□□ -1.05
CD109-204ENST00000474094 AKT1S1Q96B36 256 aa8.48□□□□□ -1.05
CD109-204ENST00000474094 ATXN8OSP0DMR3 200 aa8.47□□□□□ -1.05
CD109-204ENST00000474094 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
CD109-204ENST00000474094 ZBTB22O15209 634 aa8.36□□□□□ -1.07
CD109-204ENST00000474094 REM2Q8IYK8 340 aaPredicted RBP8.35□□□□□ -1.07
CD109-204ENST00000474094 OSCARQ8IYS5 282 aa8.33□□□□□ -1.08
CD109-204ENST00000474094 FBLN2P98095 1184 aa8.29□□□□□ -1.08
CD109-204ENST00000474094 SPDYE2BA6NHP3 402 aa8.27□□□□□ -1.09
CD109-204ENST00000474094 SPDYE6P0CI01 402 aa8.27□□□□□ -1.09
CD109-204ENST00000474094 SPDYE2Q495Y8 402 aa8.27□□□□□ -1.09
CD109-204ENST00000474094 PIP4P2Q8N4L2 257 aa8.24□□□□□ -1.09
CD109-204ENST00000474094 PITPNM1O00562 1244 aa8.23□□□□□ -1.09
CD109-204ENST00000474094 FXR2P51116 673 aaKnown RBP eCLIP8.23□□□□□ -1.09
CD109-204ENST00000474094 SP7Q8TDD2 431 aaPredicted RBP8.22□□□□□ -1.09
CD109-204ENST00000474094 HAX1O00165 279 aa8.14□□□□□ -1.11
CD109-204ENST00000474094 SPDYE1Q8NFV5 336 aaPredicted RBP8.14□□□□□ -1.11
CD109-204ENST00000474094 ZNF692Q9BU19 519 aaPredicted RBP8.12□□□□□ -1.11
CD109-204ENST00000474094 MKRN4PQ13434 485 aaPredicted RBP8.11□□□□□ -1.11
CD109-204ENST00000474094 SSUH2Q9Y2M2 353 aa8.11□□□□□ -1.11
CD109-204ENST00000474094 CLEC11AQ9Y240 323 aa8.06□□□□□ -1.12
CD109-204ENST00000474094 PRKAR2AP13861 404 aaKnown RBP8.03□□□□□ -1.12
CD109-204ENST00000474094 C19orf67A6NJJ6 358 aa7.96□□□□□ -1.14
CD109-204ENST00000474094 PRR29P0C7W0 189 aa7.96□□□□□ -1.14
CD109-204ENST00000474094 PABPN1Q86U42 306 aaKnown RBP eCLIP7.96□□□□□ -1.14
CD109-204ENST00000474094 CSRNP3Q8WYN3 585 aa7.96□□□□□ -1.14
CD109-204ENST00000474094 EVX2Q03828 476 aa7.95□□□□□ -1.14
CD109-204ENST00000474094 CLCN6P51797 869 aa7.87□□□□□ -1.15
CD109-204ENST00000474094 CHADLQ6NUI6 762 aa7.86□□□□□ -1.15
CD109-204ENST00000474094 STAG3Q9UJ98 1225 aa7.85□□□□□ -1.15
CD109-204ENST00000474094 GABBR2O75899 941 aa7.84□□□□□ -1.15
CD109-204ENST00000474094 FARP1Q9Y4F1 1045 aaPredicted RBP7.82□□□□□ -1.16
CD109-204ENST00000474094 CD44P16070 742 aaKnown RBP7.78□□□□□ -1.16
CD109-204ENST00000474094 EHMT2Q96KQ7 1210 aa7.75□□□□□ -1.17
CD109-204ENST00000474094 SPDYE4A6NLX3 237 aa7.74□□□□□ -1.17
CD109-204ENST00000474094 LHX8Q68G74 356 aa7.7□□□□□ -1.18
CD109-204ENST00000474094 CREBZFQ9NS37 354 aa7.7□□□□□ -1.18
CD109-204ENST00000474094 ZNF579Q8NAF0 562 aaKnown RBP7.69□□□□□ -1.18
CD109-204ENST00000474094 NPM1P06748 294 aaKnown RBP eCLIP7.66□□□□□ -1.18
CD109-204ENST00000474094 PAK3O75914 559 aaPredicted RBP7.65□□□□□ -1.18
CD109-204ENST00000474094 ZRANB1Q9UGI0 708 aa7.65□□□□□ -1.18
CD109-204ENST00000474094 DCBLD2Q96PD2 775 aa7.64□□□□□ -1.19
CD109-204ENST00000474094 POTEIP0CG38 1075 aa7.62□□□□□ -1.19
CD109-204ENST00000474094 MNX1P50219 401 aaPredicted RBP7.56□□□□□ -1.2
CD109-204ENST00000474094 PROM2Q8N271 834 aa7.56□□□□□ -1.2
CD109-204ENST00000474094 GALR2O43603 387 aaPredicted RBP7.52□□□□□ -1.21
CD109-204ENST00000474094 PLEKHG5O94827 1062 aa7.5□□□□□ -1.21
CD109-204ENST00000474094 PHF12Q96QT6 1004 aa7.48□□□□□ -1.21
CD109-204ENST00000474094 ASTLQ6HA08 431 aaPredicted RBP7.43□□□□□ -1.22
CD109-204ENST00000474094 C7P10643 843 aa7.42□□□□□ -1.22
CD109-204ENST00000474094 SLC39A7Q92504 469 aa7.42□□□□□ -1.22
CD109-204ENST00000474094 MIER1Q8N108 512 aa7.41□□□□□ -1.22
CD109-204ENST00000474094 MS4A3Q96HJ5 214 aa7.4□□□□□ -1.22
CD109-204ENST00000474094 TSPYL2Q9H2G4 693 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms