RNA–Protein interactions for RNA: ENST00000473886.1

GSK3B-203, Transcript of glycogen synthase kinase 3 beta, humanhuman

TSL 5

Gene GSK3B, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3B-203ENST00000473886 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
GSK3B-203ENST00000473886 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
GSK3B-203ENST00000473886 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.17
GSK3B-203ENST00000473886 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
GSK3B-203ENST00000473886 FOXD1Q16676 465 aa20.89■□□□□ 0.93
GSK3B-203ENST00000473886 PLPPR3Q6T4P5 718 aa19.88■□□□□ 0.77
GSK3B-203ENST00000473886 MSH5O43196 834 aa19.53■□□□□ 0.72
GSK3B-203ENST00000473886 PIAS4Q8N2W9 510 aaPredicted RBP19.52■□□□□ 0.72
GSK3B-203ENST00000473886 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
GSK3B-203ENST00000473886 ADRA2BP18089 450 aa19.46■□□□□ 0.71
GSK3B-203ENST00000473886 POTEDQ86YR6 584 aa19.13■□□□□ 0.65
GSK3B-203ENST00000473886 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
GSK3B-203ENST00000473886 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
GSK3B-203ENST00000473886 SCAF1Q9H7N4 1312 aaKnown RBP17.74■□□□□ 0.43
GSK3B-203ENST00000473886 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
GSK3B-203ENST00000473886 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
GSK3B-203ENST00000473886 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
GSK3B-203ENST00000473886 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
GSK3B-203ENST00000473886 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
GSK3B-203ENST00000473886 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
GSK3B-203ENST00000473886 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
GSK3B-203ENST00000473886 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
GSK3B-203ENST00000473886 NPM3O75607 178 aaKnown RBP16.53■□□□□ 0.24
GSK3B-203ENST00000473886 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
GSK3B-203ENST00000473886 C1QBPQ07021 282 aaKnown RBP16.41■□□□□ 0.22
GSK3B-203ENST00000473886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.2
GSK3B-203ENST00000473886 KCNA4P22459 653 aa16.22■□□□□ 0.19
GSK3B-203ENST00000473886 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
GSK3B-203ENST00000473886 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
GSK3B-203ENST00000473886 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
GSK3B-203ENST00000473886 CAPN15O75808 1086 aa15.69■□□□□ 0.1
GSK3B-203ENST00000473886 DSG3P32926 999 aa15.62■□□□□ 0.09
GSK3B-203ENST00000473886 APLP2Q06481 763 aa15.46■□□□□ 0.07
GSK3B-203ENST00000473886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
GSK3B-203ENST00000473886 TRHP20396 242 aaPredicted RBP15.45■□□□□ 0.06
GSK3B-203ENST00000473886 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
GSK3B-203ENST00000473886 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
GSK3B-203ENST00000473886 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
GSK3B-203ENST00000473886 ABCB7O75027 752 aa15.36■□□□□ 0.05
GSK3B-203ENST00000473886 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
GSK3B-203ENST00000473886 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
GSK3B-203ENST00000473886 FOXD4L1Q9NU39 408 aa15.12■□□□□ 0.01
GSK3B-203ENST00000473886 POLA2Q14181 598 aa15.01□□□□□ -0.01
GSK3B-203ENST00000473886 POTEHQ6S545 545 aa14.98□□□□□ -0.01
GSK3B-203ENST00000473886 ATF5Q9Y2D1 282 aaPredicted RBP14.96□□□□□ -0.01
GSK3B-203ENST00000473886 ZBTB22O15209 634 aa14.92□□□□□ -0.02
GSK3B-203ENST00000473886 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
GSK3B-203ENST00000473886 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
GSK3B-203ENST00000473886 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
GSK3B-203ENST00000473886 CHRDL2Q6WN34 429 aa14.58□□□□□ -0.08
GSK3B-203ENST00000473886 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
GSK3B-203ENST00000473886 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
GSK3B-203ENST00000473886 REM2Q8IYK8 340 aaPredicted RBP14.42□□□□□ -0.1
GSK3B-203ENST00000473886 FBLN2P98095 1184 aa14.34□□□□□ -0.11
GSK3B-203ENST00000473886 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
GSK3B-203ENST00000473886 MKRN4PQ13434 485 aaPredicted RBP14.27□□□□□ -0.13
GSK3B-203ENST00000473886 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
GSK3B-203ENST00000473886 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
GSK3B-203ENST00000473886 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
GSK3B-203ENST00000473886 PIP4P2Q8N4L2 257 aa14.24□□□□□ -0.13
GSK3B-203ENST00000473886 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
GSK3B-203ENST00000473886 FXR2P51116 673 aaKnown RBP eCLIP14.14□□□□□ -0.15
GSK3B-203ENST00000473886 SSUH2Q9Y2M2 353 aa14.08□□□□□ -0.16
GSK3B-203ENST00000473886 ZNF692Q9BU19 519 aaPredicted RBP14.07□□□□□ -0.16
GSK3B-203ENST00000473886 SP7Q8TDD2 431 aaPredicted RBP14.03□□□□□ -0.16
GSK3B-203ENST00000473886 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
GSK3B-203ENST00000473886 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
GSK3B-203ENST00000473886 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
GSK3B-203ENST00000473886 HAX1O00165 279 aa13.96□□□□□ -0.17
GSK3B-203ENST00000473886 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
GSK3B-203ENST00000473886 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
GSK3B-203ENST00000473886 EVX2Q03828 476 aa13.82□□□□□ -0.2
GSK3B-203ENST00000473886 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
GSK3B-203ENST00000473886 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
GSK3B-203ENST00000473886 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
GSK3B-203ENST00000473886 SPDYE4A6NLX3 237 aa13.56□□□□□ -0.24
GSK3B-203ENST00000473886 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
GSK3B-203ENST00000473886 GABBR2O75899 941 aa13.48□□□□□ -0.25
GSK3B-203ENST00000473886 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
GSK3B-203ENST00000473886 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.25
GSK3B-203ENST00000473886 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
GSK3B-203ENST00000473886 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
GSK3B-203ENST00000473886 ZRANB1Q9UGI0 708 aa13.26□□□□□ -0.29
GSK3B-203ENST00000473886 PROM2Q8N271 834 aa13.24□□□□□ -0.29
GSK3B-203ENST00000473886 POTEIP0CG38 1075 aa13.23□□□□□ -0.29
GSK3B-203ENST00000473886 CLCN6P51797 869 aa13.21□□□□□ -0.29
GSK3B-203ENST00000473886 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
GSK3B-203ENST00000473886 LHX8Q68G74 356 aa13.15□□□□□ -0.3
GSK3B-203ENST00000473886 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
GSK3B-203ENST00000473886 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
GSK3B-203ENST00000473886 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
GSK3B-203ENST00000473886 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
GSK3B-203ENST00000473886 DCBLD2Q96PD2 775 aa13.1□□□□□ -0.31
GSK3B-203ENST00000473886 TSPYL2Q9H2G4 693 aaPredicted RBP12.94□□□□□ -0.34
GSK3B-203ENST00000473886 MS4A3Q96HJ5 214 aa12.93□□□□□ -0.34
GSK3B-203ENST00000473886 MIER1Q8N108 512 aa12.91□□□□□ -0.34
GSK3B-203ENST00000473886 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
GSK3B-203ENST00000473886 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
GSK3B-203ENST00000473886 FKBP8Q14318 412 aa12.87□□□□□ -0.35
GSK3B-203ENST00000473886 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms