RNA–Protein interactions for RNA: ENST00000473806.5

MSL3-212, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-212ENST00000473806 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
MSL3-212ENST00000473806 CHIC1Q5VXU3 224 aa22.64■■□□□ 1.21
MSL3-212ENST00000473806 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
MSL3-212ENST00000473806 PHF23Q9BUL5 403 aaPredicted RBP20.41■□□□□ 0.86
MSL3-212ENST00000473806 FOXD1Q16676 465 aa19.41■□□□□ 0.7
MSL3-212ENST00000473806 POTEDQ86YR6 584 aa18.54■□□□□ 0.56
MSL3-212ENST00000473806 MSH5O43196 834 aa18.24■□□□□ 0.51
MSL3-212ENST00000473806 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
MSL3-212ENST00000473806 PLPPR3Q6T4P5 718 aa17.89■□□□□ 0.45
MSL3-212ENST00000473806 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
MSL3-212ENST00000473806 ADRA2BP18089 450 aa17.8■□□□□ 0.44
MSL3-212ENST00000473806 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
MSL3-212ENST00000473806 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
MSL3-212ENST00000473806 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
MSL3-212ENST00000473806 CACNB1Q02641 598 aaPredicted RBP15.95■□□□□ 0.14
MSL3-212ENST00000473806 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
MSL3-212ENST00000473806 PPP4R3CPQ6ZMV5 832 aa15.66■□□□□ 0.1
MSL3-212ENST00000473806 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
MSL3-212ENST00000473806 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
MSL3-212ENST00000473806 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
MSL3-212ENST00000473806 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
MSL3-212ENST00000473806 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
MSL3-212ENST00000473806 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
MSL3-212ENST00000473806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
MSL3-212ENST00000473806 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
MSL3-212ENST00000473806 NPM3O75607 178 aaKnown RBP14.73□□□□□ -0.05
MSL3-212ENST00000473806 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
MSL3-212ENST00000473806 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
MSL3-212ENST00000473806 CAPN15O75808 1086 aa14.47□□□□□ -0.09
MSL3-212ENST00000473806 DSG3P32926 999 aa14.46□□□□□ -0.09
MSL3-212ENST00000473806 POTEHQ6S545 545 aa14.44□□□□□ -0.1
MSL3-212ENST00000473806 SLC4A2P04920 1241 aa14.18□□□□□ -0.14
MSL3-212ENST00000473806 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
MSL3-212ENST00000473806 ABCB7O75027 752 aa14.14□□□□□ -0.15
MSL3-212ENST00000473806 KCNA4P22459 653 aa14.14□□□□□ -0.15
MSL3-212ENST00000473806 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
MSL3-212ENST00000473806 APLP2Q06481 763 aa14.01□□□□□ -0.17
MSL3-212ENST00000473806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.92□□□□□ -0.18
MSL3-212ENST00000473806 HNRNPUL2Q1KMD3 747 aaKnown RBP13.92□□□□□ -0.18
MSL3-212ENST00000473806 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
MSL3-212ENST00000473806 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
MSL3-212ENST00000473806 POLA2Q14181 598 aa13.66□□□□□ -0.22
MSL3-212ENST00000473806 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
MSL3-212ENST00000473806 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
MSL3-212ENST00000473806 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
MSL3-212ENST00000473806 AKT1S1Q96B36 256 aa13.36□□□□□ -0.27
MSL3-212ENST00000473806 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
MSL3-212ENST00000473806 REM2Q8IYK8 340 aaPredicted RBP13.28□□□□□ -0.28
MSL3-212ENST00000473806 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
MSL3-212ENST00000473806 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
MSL3-212ENST00000473806 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
MSL3-212ENST00000473806 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
MSL3-212ENST00000473806 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
MSL3-212ENST00000473806 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
MSL3-212ENST00000473806 HAX1O00165 279 aa13.13□□□□□ -0.31
MSL3-212ENST00000473806 FXR2P51116 673 aaKnown RBP eCLIP13.08□□□□□ -0.32
MSL3-212ENST00000473806 ZBTB22O15209 634 aa13.01□□□□□ -0.33
MSL3-212ENST00000473806 EVX2Q03828 476 aa12.97□□□□□ -0.33
MSL3-212ENST00000473806 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
MSL3-212ENST00000473806 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
MSL3-212ENST00000473806 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
MSL3-212ENST00000473806 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
MSL3-212ENST00000473806 FBLN2P98095 1184 aa12.82□□□□□ -0.36
MSL3-212ENST00000473806 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
MSL3-212ENST00000473806 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
MSL3-212ENST00000473806 MKRN4PQ13434 485 aaPredicted RBP12.74□□□□□ -0.37
MSL3-212ENST00000473806 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
MSL3-212ENST00000473806 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
MSL3-212ENST00000473806 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
MSL3-212ENST00000473806 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
MSL3-212ENST00000473806 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
MSL3-212ENST00000473806 GABBR2O75899 941 aa12.61□□□□□ -0.39
MSL3-212ENST00000473806 LHX8Q68G74 356 aa12.51□□□□□ -0.41
MSL3-212ENST00000473806 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
MSL3-212ENST00000473806 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
MSL3-212ENST00000473806 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
MSL3-212ENST00000473806 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
MSL3-212ENST00000473806 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
MSL3-212ENST00000473806 DCBLD2Q96PD2 775 aa12.18□□□□□ -0.46
MSL3-212ENST00000473806 CLCN6P51797 869 aa12.16□□□□□ -0.46
MSL3-212ENST00000473806 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
MSL3-212ENST00000473806 ZRANB1Q9UGI0 708 aa12.15□□□□□ -0.46
MSL3-212ENST00000473806 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
MSL3-212ENST00000473806 PLSCR2Q9NRY7 297 aa12.1□□□□□ -0.47
MSL3-212ENST00000473806 GALR2O43603 387 aaPredicted RBP12.07□□□□□ -0.48
MSL3-212ENST00000473806 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
MSL3-212ENST00000473806 PHF12Q96QT6 1004 aa11.99□□□□□ -0.49
MSL3-212ENST00000473806 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
MSL3-212ENST00000473806 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
MSL3-212ENST00000473806 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
MSL3-212ENST00000473806 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
MSL3-212ENST00000473806 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
MSL3-212ENST00000473806 PELP1Q8IZL8 1130 aaKnown RBP11.88□□□□□ -0.51
MSL3-212ENST00000473806 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
MSL3-212ENST00000473806 POTEMA6NI47 508 aa11.83□□□□□ -0.52
MSL3-212ENST00000473806 NPM1P06748 294 aaKnown RBP eCLIP11.82□□□□□ -0.52
MSL3-212ENST00000473806 MS4A3Q96HJ5 214 aa11.8□□□□□ -0.52
MSL3-212ENST00000473806 POTEGQ6S5H5 508 aa11.78□□□□□ -0.52
MSL3-212ENST00000473806 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
MSL3-212ENST00000473806 ASTLQ6HA08 431 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms