RNA–Protein interactions for RNA: ENST00000473746.1

SEC63-208, Transcript of SEC63 homolog, protein translocation regulator, humanhuman

TSL 2

Gene SEC63, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC63-208ENST00000473746 AEBP2Q6ZN18 517 aaPredicted RBP24.41■■□□□ 1.5
SEC63-208ENST00000473746 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
SEC63-208ENST00000473746 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
SEC63-208ENST00000473746 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
SEC63-208ENST00000473746 FOXD1Q16676 465 aa19.52■□□□□ 0.72
SEC63-208ENST00000473746 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
SEC63-208ENST00000473746 MSH5O43196 834 aa18.41■□□□□ 0.54
SEC63-208ENST00000473746 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
SEC63-208ENST00000473746 PIAS4Q8N2W9 510 aaPredicted RBP18.17■□□□□ 0.5
SEC63-208ENST00000473746 PPP6R1Q9UPN7 881 aa18.01■□□□□ 0.47
SEC63-208ENST00000473746 ADRA2BP18089 450 aa17.95■□□□□ 0.46
SEC63-208ENST00000473746 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
SEC63-208ENST00000473746 DMRT2Q9Y5R5 561 aa16.52■□□□□ 0.24
SEC63-208ENST00000473746 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
SEC63-208ENST00000473746 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
SEC63-208ENST00000473746 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
SEC63-208ENST00000473746 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
SEC63-208ENST00000473746 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
SEC63-208ENST00000473746 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
SEC63-208ENST00000473746 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
SEC63-208ENST00000473746 RNF216Q9NWF9 866 aaPredicted RBP15.61■□□□□ 0.09
SEC63-208ENST00000473746 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
SEC63-208ENST00000473746 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.04
SEC63-208ENST00000473746 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
SEC63-208ENST00000473746 KCNA4P22459 653 aa15.13■□□□□ 0.01
SEC63-208ENST00000473746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC63-208ENST00000473746 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
SEC63-208ENST00000473746 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
SEC63-208ENST00000473746 CAPN15O75808 1086 aa14.61□□□□□ -0.07
SEC63-208ENST00000473746 POTEHQ6S545 545 aa14.6□□□□□ -0.07
SEC63-208ENST00000473746 SPINK5Q9NQ38 1064 aaPredicted RBP14.58□□□□□ -0.08
SEC63-208ENST00000473746 DSG3P32926 999 aa14.56□□□□□ -0.08
SEC63-208ENST00000473746 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
SEC63-208ENST00000473746 APLP2Q06481 763 aa14.32□□□□□ -0.12
SEC63-208ENST00000473746 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
SEC63-208ENST00000473746 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
SEC63-208ENST00000473746 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
SEC63-208ENST00000473746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
SEC63-208ENST00000473746 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
SEC63-208ENST00000473746 ABCB7O75027 752 aa14.21□□□□□ -0.13
SEC63-208ENST00000473746 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
SEC63-208ENST00000473746 ZBTB22O15209 634 aa14.02□□□□□ -0.17
SEC63-208ENST00000473746 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
SEC63-208ENST00000473746 POLA2Q14181 598 aa13.85□□□□□ -0.19
SEC63-208ENST00000473746 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
SEC63-208ENST00000473746 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
SEC63-208ENST00000473746 CHRDL2Q6WN34 429 aa13.73□□□□□ -0.21
SEC63-208ENST00000473746 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
SEC63-208ENST00000473746 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.22
SEC63-208ENST00000473746 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
SEC63-208ENST00000473746 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
SEC63-208ENST00000473746 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
SEC63-208ENST00000473746 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
SEC63-208ENST00000473746 REM2Q8IYK8 340 aaPredicted RBP13.41□□□□□ -0.26
SEC63-208ENST00000473746 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
SEC63-208ENST00000473746 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
SEC63-208ENST00000473746 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
SEC63-208ENST00000473746 HAX1O00165 279 aa13.24□□□□□ -0.29
SEC63-208ENST00000473746 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
SEC63-208ENST00000473746 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.291e-7■■■■■ 33.7
SEC63-208ENST00000473746 FBLN2P98095 1184 aa13.09□□□□□ -0.31
SEC63-208ENST00000473746 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
SEC63-208ENST00000473746 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
SEC63-208ENST00000473746 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
SEC63-208ENST00000473746 MKRN4PQ13434 485 aaPredicted RBP13.01□□□□□ -0.33
SEC63-208ENST00000473746 EVX2Q03828 476 aa12.99□□□□□ -0.33
SEC63-208ENST00000473746 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.33
SEC63-208ENST00000473746 SPDYE1Q8NFV5 336 aaPredicted RBP12.95□□□□□ -0.34
SEC63-208ENST00000473746 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
SEC63-208ENST00000473746 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
SEC63-208ENST00000473746 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
SEC63-208ENST00000473746 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
SEC63-208ENST00000473746 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
SEC63-208ENST00000473746 GABBR2O75899 941 aa12.7□□□□□ -0.38
SEC63-208ENST00000473746 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
SEC63-208ENST00000473746 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEC63-208ENST00000473746 LHX8Q68G74 356 aa12.6□□□□□ -0.39
SEC63-208ENST00000473746 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
SEC63-208ENST00000473746 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
SEC63-208ENST00000473746 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
SEC63-208ENST00000473746 CLCN6P51797 869 aa12.44□□□□□ -0.42
SEC63-208ENST00000473746 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
SEC63-208ENST00000473746 DCBLD2Q96PD2 775 aa12.33□□□□□ -0.44
SEC63-208ENST00000473746 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
SEC63-208ENST00000473746 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
SEC63-208ENST00000473746 FKBP8Q14318 412 aa12.27□□□□□ -0.45
SEC63-208ENST00000473746 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
SEC63-208ENST00000473746 CREBZFQ9NS37 354 aa12.26□□□□□ -0.45
SEC63-208ENST00000473746 PROM2Q8N271 834 aa12.24□□□□□ -0.45
SEC63-208ENST00000473746 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
SEC63-208ENST00000473746 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
SEC63-208ENST00000473746 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
SEC63-208ENST00000473746 NPM1P06748 294 aaKnown RBP eCLIP12.09□□□□□ -0.47
SEC63-208ENST00000473746 PHF12Q96QT6 1004 aa12.05□□□□□ -0.48
SEC63-208ENST00000473746 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
SEC63-208ENST00000473746 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
SEC63-208ENST00000473746 MNX1P50219 401 aaPredicted RBP11.99□□□□□ -0.49
SEC63-208ENST00000473746 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
SEC63-208ENST00000473746 POTEMA6NI47 508 aa11.87□□□□□ -0.51
SEC63-208ENST00000473746 ASTLQ6HA08 431 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms