RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 AEBP2Q6ZN18 517 aaPredicted RBP27.84■■■□□ 2.05
CNOT9-206ENST00000473626 CHIC1Q5VXU3 224 aa27.25■■□□□ 1.95
CNOT9-206ENST00000473626 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
CNOT9-206ENST00000473626 SENP3Q9H4L4 574 aaPredicted RBP23.43■■□□□ 1.34
CNOT9-206ENST00000473626 PLPPR3Q6T4P5 718 aa22.15■■□□□ 1.14
CNOT9-206ENST00000473626 FOXD1Q16676 465 aa21.85■■□□□ 1.09
CNOT9-206ENST00000473626 PPP6R1Q9UPN7 881 aa21.23■□□□□ 0.99
CNOT9-206ENST00000473626 ADRA2BP18089 450 aa21.21■□□□□ 0.99
CNOT9-206ENST00000473626 PIAS4Q8N2W9 510 aaPredicted RBP20.62■□□□□ 0.89
CNOT9-206ENST00000473626 MSH5O43196 834 aa19.93■□□□□ 0.78
CNOT9-206ENST00000473626 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
CNOT9-206ENST00000473626 KCNA4P22459 653 aa19.43■□□□□ 0.7
CNOT9-206ENST00000473626 MAPK8IP2Q13387 824 aaPredicted RBP19.23■□□□□ 0.67
CNOT9-206ENST00000473626 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
CNOT9-206ENST00000473626 NCBP3Q53F19 620 aaKnown RBP19.04■□□□□ 0.64
CNOT9-206ENST00000473626 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
CNOT9-206ENST00000473626 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
CNOT9-206ENST00000473626 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
CNOT9-206ENST00000473626 RNF216Q9NWF9 866 aaPredicted RBP18.53■□□□□ 0.56
CNOT9-206ENST00000473626 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
CNOT9-206ENST00000473626 HOXD11P31277 338 aaPredicted RBP18.43■□□□□ 0.54
CNOT9-206ENST00000473626 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
CNOT9-206ENST00000473626 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
CNOT9-206ENST00000473626 DCAF8L1A6NGE4 600 aa18.05■□□□□ 0.48
CNOT9-206ENST00000473626 POTEDQ86YR6 584 aa17.98■□□□□ 0.47
CNOT9-206ENST00000473626 ZBTB22O15209 634 aa17.92■□□□□ 0.46
CNOT9-206ENST00000473626 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
CNOT9-206ENST00000473626 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
CNOT9-206ENST00000473626 FOXD4L1Q9NU39 408 aa17.72■□□□□ 0.43
CNOT9-206ENST00000473626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.41
CNOT9-206ENST00000473626 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
CNOT9-206ENST00000473626 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
CNOT9-206ENST00000473626 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
CNOT9-206ENST00000473626 ATF5Q9Y2D1 282 aaPredicted RBP17.07■□□□□ 0.32
CNOT9-206ENST00000473626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
CNOT9-206ENST00000473626 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
CNOT9-206ENST00000473626 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
CNOT9-206ENST00000473626 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
CNOT9-206ENST00000473626 C1QBPQ07021 282 aaKnown RBP16.9■□□□□ 0.3
CNOT9-206ENST00000473626 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
CNOT9-206ENST00000473626 APLP2Q06481 763 aa16.78■□□□□ 0.28
CNOT9-206ENST00000473626 CAPN15O75808 1086 aa16.76■□□□□ 0.27
CNOT9-206ENST00000473626 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
CNOT9-206ENST00000473626 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
CNOT9-206ENST00000473626 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
CNOT9-206ENST00000473626 ABCB7O75027 752 aa16.54■□□□□ 0.24
CNOT9-206ENST00000473626 POLA2Q14181 598 aa16.5■□□□□ 0.23
CNOT9-206ENST00000473626 DSG3P32926 999 aa16.42■□□□□ 0.22
CNOT9-206ENST00000473626 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
CNOT9-206ENST00000473626 FKBP8Q14318 412 aa16.18■□□□□ 0.18
CNOT9-206ENST00000473626 FBLN2P98095 1184 aa16.15■□□□□ 0.18
CNOT9-206ENST00000473626 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
CNOT9-206ENST00000473626 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
CNOT9-206ENST00000473626 SPDYE4A6NLX3 237 aa15.94■□□□□ 0.14
CNOT9-206ENST00000473626 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
CNOT9-206ENST00000473626 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
CNOT9-206ENST00000473626 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
CNOT9-206ENST00000473626 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
CNOT9-206ENST00000473626 PROM2Q8N271 834 aa15.65■□□□□ 0.1
CNOT9-206ENST00000473626 SSUH2Q9Y2M2 353 aa15.65■□□□□ 0.1
CNOT9-206ENST00000473626 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
CNOT9-206ENST00000473626 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
CNOT9-206ENST00000473626 AKT1S1Q96B36 256 aa15.41■□□□□ 0.06
CNOT9-206ENST00000473626 FBXO3Q9UK99 471 aa15.4■□□□□ 0.06
CNOT9-206ENST00000473626 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
CNOT9-206ENST00000473626 VASPP50552 380 aaPredicted RBP15.29■□□□□ 0.04
CNOT9-206ENST00000473626 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
CNOT9-206ENST00000473626 SPDYE1Q8NFV5 336 aaPredicted RBP15.22■□□□□ 0.03
CNOT9-206ENST00000473626 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
CNOT9-206ENST00000473626 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
CNOT9-206ENST00000473626 IFNLR1Q8IU57 520 aaPredicted RBP15.14■□□□□ 0.01
CNOT9-206ENST00000473626 MIER1Q8N108 512 aa15.11■□□□□ 0.01
CNOT9-206ENST00000473626 PLCD3Q8N3E9 789 aa15.1■□□□□ 0.01
CNOT9-206ENST00000473626 PRR29P0C7W0 189 aa15.07■□□□□ 0
CNOT9-206ENST00000473626 RTN4Q9NQC3 1192 aaKnown RBP15.05■□□□□ -0
CNOT9-206ENST00000473626 KLHL34Q8N239 644 aa15□□□□□ -0.01
CNOT9-206ENST00000473626 CREBZFQ9NS37 354 aa14.97□□□□□ -0.01
CNOT9-206ENST00000473626 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
CNOT9-206ENST00000473626 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
CNOT9-206ENST00000473626 CHRDL2Q6WN34 429 aa14.9□□□□□ -0.02
CNOT9-206ENST00000473626 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
CNOT9-206ENST00000473626 SPOCK2Q92563 424 aa14.85□□□□□ -0.03
CNOT9-206ENST00000473626 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
CNOT9-206ENST00000473626 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.04
CNOT9-206ENST00000473626 PRKAR2AP13861 404 aaKnown RBP14.8□□□□□ -0.04
CNOT9-206ENST00000473626 PIP4P2Q8N4L2 257 aa14.79□□□□□ -0.04
CNOT9-206ENST00000473626 ZBTB47Q9UFB7 747 aaPredicted RBP14.77□□□□□ -0.05
CNOT9-206ENST00000473626 NUBP1P53384 320 aa14.71□□□□□ -0.05
CNOT9-206ENST00000473626 PKD2Q13563 968 aa14.69□□□□□ -0.06
CNOT9-206ENST00000473626 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
CNOT9-206ENST00000473626 CIZ1Q9ULV3 898 aaPredicted RBP14.67□□□□□ -0.06
CNOT9-206ENST00000473626 RASEFQ8IZ41 740 aa14.64□□□□□ -0.07
CNOT9-206ENST00000473626 NPM1P06748 294 aaKnown RBP eCLIP14.61□□□□□ -0.07
CNOT9-206ENST00000473626 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
CNOT9-206ENST00000473626 ECM2O94769 699 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-206ENST00000473626 TSPYL2Q9H2G4 693 aaPredicted RBP14.53□□□□□ -0.08
CNOT9-206ENST00000473626 FAM212AQ96EL1 285 aa14.52□□□□□ -0.09
CNOT9-206ENST00000473626 GSE1Q14687 1217 aa14.5□□□□□ -0.09
CNOT9-206ENST00000473626 RGL2O15211 777 aa14.45□□□□□ -0.1
CNOT9-206ENST00000473626 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms