RNA–Protein interactions for RNA: ENST00000473584.1

SCP2-208, Transcript of sterol carrier protein 2, humanhuman

TSL 2

Gene SCP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-208ENST00000473584 AEBP2Q6ZN18 517 aaPredicted RBP29.24■■■□□ 2.27
SCP2-208ENST00000473584 CHIC1Q5VXU3 224 aa27.94■■■□□ 2.06
SCP2-208ENST00000473584 SENP3Q9H4L4 574 aaPredicted RBP24.83■■□□□ 1.57
SCP2-208ENST00000473584 PHF23Q9BUL5 403 aaPredicted RBP24.57■■□□□ 1.52
SCP2-208ENST00000473584 FOXD1Q16676 465 aa23.17■■□□□ 1.3
SCP2-208ENST00000473584 PLPPR3Q6T4P5 718 aa22.38■■□□□ 1.17
SCP2-208ENST00000473584 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
SCP2-208ENST00000473584 ADRA2BP18089 450 aa21.76■■□□□ 1.07
SCP2-208ENST00000473584 PIAS4Q8N2W9 510 aaPredicted RBP21.63■■□□□ 1.05
SCP2-208ENST00000473584 MSH5O43196 834 aa21.54■■□□□ 1.04
SCP2-208ENST00000473584 POTEDQ86YR6 584 aa20.71■□□□□ 0.91
SCP2-208ENST00000473584 MAPK8IP2Q13387 824 aaPredicted RBP19.94■□□□□ 0.78
SCP2-208ENST00000473584 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
SCP2-208ENST00000473584 DMRT2Q9Y5R5 561 aa19.76■□□□□ 0.75
SCP2-208ENST00000473584 PPP4R3CPQ6ZMV5 832 aa19.66■□□□□ 0.74
SCP2-208ENST00000473584 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
SCP2-208ENST00000473584 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
SCP2-208ENST00000473584 RNF216Q9NWF9 866 aaPredicted RBP19.02■□□□□ 0.64
SCP2-208ENST00000473584 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
SCP2-208ENST00000473584 DCAF8L1A6NGE4 600 aa18.81■□□□□ 0.6
SCP2-208ENST00000473584 NPM3O75607 178 aaKnown RBP18.7■□□□□ 0.58
SCP2-208ENST00000473584 KCNA4P22459 653 aa18.53■□□□□ 0.56
SCP2-208ENST00000473584 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
SCP2-208ENST00000473584 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
SCP2-208ENST00000473584 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
SCP2-208ENST00000473584 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
SCP2-208ENST00000473584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.14■□□□□ 0.49
SCP2-208ENST00000473584 U3KPZ7 1027 aaPredicted RBP17.86■□□□□ 0.45
SCP2-208ENST00000473584 SLC4A2P04920 1241 aa17.85■□□□□ 0.45
SCP2-208ENST00000473584 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
SCP2-208ENST00000473584 SLC4A1APQ9BWU0 796 aaKnown RBP17.49■□□□□ 0.39
SCP2-208ENST00000473584 CAPN15O75808 1086 aa17.41■□□□□ 0.38
SCP2-208ENST00000473584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.35■□□□□ 0.37
SCP2-208ENST00000473584 HNRNPUL2Q1KMD3 747 aaKnown RBP17.35■□□□□ 0.37
SCP2-208ENST00000473584 DSG3P32926 999 aa17.34■□□□□ 0.37
SCP2-208ENST00000473584 APLP2Q06481 763 aa17.28■□□□□ 0.36
SCP2-208ENST00000473584 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
SCP2-208ENST00000473584 MYCNP04198 464 aaPredicted RBP17.25■□□□□ 0.35
SCP2-208ENST00000473584 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
SCP2-208ENST00000473584 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
SCP2-208ENST00000473584 ZNF219Q9P2Y4 722 aaPredicted RBP17.18■□□□□ 0.34
SCP2-208ENST00000473584 ZBTB22O15209 634 aa17.08■□□□□ 0.32
SCP2-208ENST00000473584 ABCB7O75027 752 aa17.04■□□□□ 0.32
SCP2-208ENST00000473584 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
SCP2-208ENST00000473584 POLA2Q14181 598 aa16.82■□□□□ 0.28
SCP2-208ENST00000473584 ATXN8OSP0DMR3 200 aa16.69■□□□□ 0.26
SCP2-208ENST00000473584 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
SCP2-208ENST00000473584 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
SCP2-208ENST00000473584 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
SCP2-208ENST00000473584 POTEHQ6S545 545 aa16.25■□□□□ 0.19
SCP2-208ENST00000473584 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
SCP2-208ENST00000473584 EHMT2Q96KQ7 1210 aa16.25■□□□□ 0.19
SCP2-208ENST00000473584 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
SCP2-208ENST00000473584 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
SCP2-208ENST00000473584 FBLN2P98095 1184 aa16.13■□□□□ 0.17
SCP2-208ENST00000473584 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
SCP2-208ENST00000473584 REM2Q8IYK8 340 aaPredicted RBP16.04■□□□□ 0.16
SCP2-208ENST00000473584 SPDYE2BA6NHP3 402 aa16■□□□□ 0.15
SCP2-208ENST00000473584 SPDYE6P0CI01 402 aa16■□□□□ 0.15
SCP2-208ENST00000473584 SPDYE2Q495Y8 402 aa16■□□□□ 0.15
SCP2-208ENST00000473584 PITPNM1O00562 1244 aa15.86■□□□□ 0.13
SCP2-208ENST00000473584 SSUH2Q9Y2M2 353 aa15.85■□□□□ 0.13
SCP2-208ENST00000473584 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
SCP2-208ENST00000473584 PIP4P2Q8N4L2 257 aa15.75■□□□□ 0.11
SCP2-208ENST00000473584 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
SCP2-208ENST00000473584 SPDYE1Q8NFV5 336 aaPredicted RBP15.65■□□□□ 0.1
SCP2-208ENST00000473584 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCP2-208ENST00000473584 CLEC11AQ9Y240 323 aa15.57■□□□□ 0.08
SCP2-208ENST00000473584 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
SCP2-208ENST00000473584 PRKAR2AP13861 404 aaKnown RBP15.42■□□□□ 0.06
SCP2-208ENST00000473584 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
SCP2-208ENST00000473584 HAX1O00165 279 aa15.35■□□□□ 0.05
SCP2-208ENST00000473584 SP7Q8TDD2 431 aaPredicted RBP15.32■□□□□ 0.04
SCP2-208ENST00000473584 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
SCP2-208ENST00000473584 EVX2Q03828 476 aa15.28■□□□□ 0.04
SCP2-208ENST00000473584 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
SCP2-208ENST00000473584 C19orf67A6NJJ6 358 aa15.2■□□□□ 0.02
SCP2-208ENST00000473584 PROM2Q8N271 834 aa15.18■□□□□ 0.02
SCP2-208ENST00000473584 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
SCP2-208ENST00000473584 CREBZFQ9NS37 354 aa15.1■□□□□ 0.01
SCP2-208ENST00000473584 CD44P16070 742 aaKnown RBP14.94□□□□□ -0.02
SCP2-208ENST00000473584 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
SCP2-208ENST00000473584 GABBR2O75899 941 aa14.9□□□□□ -0.02
SCP2-208ENST00000473584 FKBP8Q14318 412 aa14.84□□□□□ -0.03
SCP2-208ENST00000473584 NPM1P06748 294 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCP2-208ENST00000473584 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
SCP2-208ENST00000473584 ZRANB1Q9UGI0 708 aa14.76□□□□□ -0.05
SCP2-208ENST00000473584 CLCN6P51797 869 aa14.73□□□□□ -0.05
SCP2-208ENST00000473584 MIER1Q8N108 512 aa14.66□□□□□ -0.06
SCP2-208ENST00000473584 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
SCP2-208ENST00000473584 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
SCP2-208ENST00000473584 PHF12Q96QT6 1004 aa14.59□□□□□ -0.07
SCP2-208ENST00000473584 PLEKHG5O94827 1062 aa14.56□□□□□ -0.08
SCP2-208ENST00000473584 GALR2O43603 387 aaPredicted RBP14.55□□□□□ -0.08
SCP2-208ENST00000473584 PLCD3Q8N3E9 789 aa14.55□□□□□ -0.08
SCP2-208ENST00000473584 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
SCP2-208ENST00000473584 CCDC61Q9Y6R9 512 aa14.5□□□□□ -0.09
SCP2-208ENST00000473584 RASEFQ8IZ41 740 aa14.48□□□□□ -0.09
SCP2-208ENST00000473584 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
SCP2-208ENST00000473584 DCBLD2Q96PD2 775 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms