RNA–Protein interactions for RNA: ENST00000473492.1

MTRF1-206, Transcript of mitochondrial translation release factor 1, humanhuman

TSL 3

Gene MTRF1, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1-206ENST00000473492 AEBP2Q6ZN18 517 aaPredicted RBP41.38■■■■■ 4.21
MTRF1-206ENST00000473492 CHIC1Q5VXU3 224 aa39.81■■■■□ 3.96
MTRF1-206ENST00000473492 SENP3Q9H4L4 574 aaPredicted RBP35.17■■■■□ 3.22
MTRF1-206ENST00000473492 PHF23Q9BUL5 403 aaPredicted RBP34.98■■■■□ 3.19
MTRF1-206ENST00000473492 FOXD1Q16676 465 aa32.75■■■□□ 2.83
MTRF1-206ENST00000473492 PLPPR3Q6T4P5 718 aa32.09■■■□□ 2.73
MTRF1-206ENST00000473492 PPP6R1Q9UPN7 881 aa31.09■■■□□ 2.57
MTRF1-206ENST00000473492 ADRA2BP18089 450 aa31.08■■■□□ 2.57
MTRF1-206ENST00000473492 PIAS4Q8N2W9 510 aaPredicted RBP30.8■■■□□ 2.52
MTRF1-206ENST00000473492 MSH5O43196 834 aa30.38■■■□□ 2.45
MTRF1-206ENST00000473492 POTEDQ86YR6 584 aa28.73■■■□□ 2.19
MTRF1-206ENST00000473492 MAPK8IP2Q13387 824 aaPredicted RBP28.39■■■□□ 2.14
MTRF1-206ENST00000473492 SCAF1Q9H7N4 1312 aaKnown RBP28.36■■■□□ 2.13
MTRF1-206ENST00000473492 PPP4R3CPQ6ZMV5 832 aa28.25■■■□□ 2.11
MTRF1-206ENST00000473492 DMRT2Q9Y5R5 561 aa27.97■■■□□ 2.07
MTRF1-206ENST00000473492 CNKSR2Q8WXI2 1034 aa27.53■■■□□ 2
MTRF1-206ENST00000473492 NCBP3Q53F19 620 aaKnown RBP27.32■■□□□ 1.96
MTRF1-206ENST00000473492 HOXD11P31277 338 aaPredicted RBP27.12■■□□□ 1.93
MTRF1-206ENST00000473492 RNF216Q9NWF9 866 aaPredicted RBP27.11■■□□□ 1.93
MTRF1-206ENST00000473492 DCAF8L1A6NGE4 600 aa27.03■■□□□ 1.92
MTRF1-206ENST00000473492 KCNA4P22459 653 aa26.96■■□□□ 1.91
MTRF1-206ENST00000473492 NPM3O75607 178 aaKnown RBP26.93■■□□□ 1.9
MTRF1-206ENST00000473492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.02■■□□□ 1.76
MTRF1-206ENST00000473492 RNF39Q9H2S5 420 aa25.97■■□□□ 1.75
MTRF1-206ENST00000473492 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
MTRF1-206ENST00000473492 CACNB1Q02641 598 aaPredicted RBP25.84■■□□□ 1.73
MTRF1-206ENST00000473492 C1QBPQ07021 282 aaKnown RBP25.62■■□□□ 1.69
MTRF1-206ENST00000473492 SLC4A1APQ9BWU0 796 aaKnown RBP25.58■■□□□ 1.69
MTRF1-206ENST00000473492 SLC4A2P04920 1241 aa25.54■■□□□ 1.68
MTRF1-206ENST00000473492 U3KPZ7 1027 aaPredicted RBP25.45■■□□□ 1.66
MTRF1-206ENST00000473492 SPINK5Q9NQ38 1064 aaPredicted RBP24.98■■□□□ 1.59
MTRF1-206ENST00000473492 CAPN15O75808 1086 aa24.95■■□□□ 1.58
MTRF1-206ENST00000473492 FOXD4L1Q9NU39 408 aa24.94■■□□□ 1.58
MTRF1-206ENST00000473492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.89■■□□□ 1.58
MTRF1-206ENST00000473492 HNRNPUL2Q1KMD3 747 aaKnown RBP24.89■■□□□ 1.58
MTRF1-206ENST00000473492 MYCNP04198 464 aaPredicted RBP24.87■■□□□ 1.57
MTRF1-206ENST00000473492 SAMD1Q6SPF0 538 aaPredicted RBP24.79■■□□□ 1.56
MTRF1-206ENST00000473492 ZBTB22O15209 634 aa24.78■■□□□ 1.56
MTRF1-206ENST00000473492 APLP2Q06481 763 aa24.77■■□□□ 1.56
MTRF1-206ENST00000473492 TRHP20396 242 aaPredicted RBP24.71■■□□□ 1.55
MTRF1-206ENST00000473492 DSG3P32926 999 aa24.55■■□□□ 1.52
MTRF1-206ENST00000473492 ZNF219Q9P2Y4 722 aaPredicted RBP24.55■■□□□ 1.52
MTRF1-206ENST00000473492 ABCB7O75027 752 aa24.45■■□□□ 1.5
MTRF1-206ENST00000473492 EHMT2Q96KQ7 1210 aa24.31■■□□□ 1.48
MTRF1-206ENST00000473492 ATF5Q9Y2D1 282 aaPredicted RBP24.31■■□□□ 1.48
MTRF1-206ENST00000473492 CSRNP3Q8WYN3 585 aa24.16■■□□□ 1.46
MTRF1-206ENST00000473492 POLA2Q14181 598 aa24.12■■□□□ 1.45
MTRF1-206ENST00000473492 ATXN8OSP0DMR3 200 aa24.02■■□□□ 1.44
MTRF1-206ENST00000473492 ZBTB12Q9Y330 459 aaPredicted RBP23.57■■□□□ 1.36
MTRF1-206ENST00000473492 RBM42Q9BTD8 480 aaKnown RBP23.39■■□□□ 1.33
MTRF1-206ENST00000473492 FBLN2P98095 1184 aa23.33■■□□□ 1.33
MTRF1-206ENST00000473492 OSCARQ8IYS5 282 aa23.33■■□□□ 1.33
MTRF1-206ENST00000473492 MKRN4PQ13434 485 aaPredicted RBP23.18■■□□□ 1.3
MTRF1-206ENST00000473492 AKT1S1Q96B36 256 aa22.98■■□□□ 1.27
MTRF1-206ENST00000473492 SPDYE2BA6NHP3 402 aa22.9■■□□□ 1.26
MTRF1-206ENST00000473492 SPDYE6P0CI01 402 aa22.9■■□□□ 1.26
MTRF1-206ENST00000473492 SPDYE2Q495Y8 402 aa22.9■■□□□ 1.26
MTRF1-206ENST00000473492 ZNF692Q9BU19 519 aaPredicted RBP22.82■■□□□ 1.24
MTRF1-206ENST00000473492 REM2Q8IYK8 340 aaPredicted RBP22.81■■□□□ 1.24
MTRF1-206ENST00000473492 CHRDL2Q6WN34 429 aa22.7■■□□□ 1.22
MTRF1-206ENST00000473492 POTEHQ6S545 545 aa22.64■■□□□ 1.21
MTRF1-206ENST00000473492 SSUH2Q9Y2M2 353 aa22.63■■□□□ 1.21
MTRF1-206ENST00000473492 PITPNM1O00562 1244 aa22.56■■□□□ 1.2
MTRF1-206ENST00000473492 PABPN1Q86U42 306 aaKnown RBP eCLIP22.51■■□□□ 1.19
MTRF1-206ENST00000473492 CLEC11AQ9Y240 323 aa22.47■■□□□ 1.19
MTRF1-206ENST00000473492 SPDYE4A6NLX3 237 aa22.43■■□□□ 1.18
MTRF1-206ENST00000473492 SPDYE1Q8NFV5 336 aaPredicted RBP22.4■■□□□ 1.18
MTRF1-206ENST00000473492 PIP4P2Q8N4L2 257 aa22.28■■□□□ 1.16
MTRF1-206ENST00000473492 FXR2P51116 673 aaKnown RBP eCLIP22.19■■□□□ 1.14
MTRF1-206ENST00000473492 PRR29P0C7W0 189 aa22.12■■□□□ 1.13
MTRF1-206ENST00000473492 PRKAR2AP13861 404 aaKnown RBP22.03■■□□□ 1.12
MTRF1-206ENST00000473492 FKBP8Q14318 412 aa21.96■■□□□ 1.11
MTRF1-206ENST00000473492 CHADLQ6NUI6 762 aa21.96■■□□□ 1.11
MTRF1-206ENST00000473492 STAG3Q9UJ98 1225 aa21.93■■□□□ 1.1
MTRF1-206ENST00000473492 HAX1O00165 279 aa21.81■■□□□ 1.08
MTRF1-206ENST00000473492 PROM2Q8N271 834 aa21.8■■□□□ 1.08
MTRF1-206ENST00000473492 CREBZFQ9NS37 354 aa21.64■■□□□ 1.05
MTRF1-206ENST00000473492 FARP1Q9Y4F1 1045 aaPredicted RBP21.6■■□□□ 1.05
MTRF1-206ENST00000473492 EVX2Q03828 476 aa21.53■■□□□ 1.04
MTRF1-206ENST00000473492 SP7Q8TDD2 431 aaPredicted RBP21.48■■□□□ 1.03
MTRF1-206ENST00000473492 C19orf67A6NJJ6 358 aa21.46■■□□□ 1.03
MTRF1-206ENST00000473492 MIER1Q8N108 512 aa21.39■■□□□ 1.01
MTRF1-206ENST00000473492 CD44P16070 742 aaKnown RBP21.36■■□□□ 1.01
MTRF1-206ENST00000473492 PLCD3Q8N3E9 789 aa21.31■■□□□ 1
MTRF1-206ENST00000473492 PLEKHG5O94827 1062 aa21.3■■□□□ 1
MTRF1-206ENST00000473492 NPM1P06748 294 aaKnown RBP eCLIP21.28■■□□□ 1
MTRF1-206ENST00000473492 MNX1P50219 401 aaPredicted RBP21.28■■□□□ 1
MTRF1-206ENST00000473492 FBXO3Q9UK99 471 aa21.24■□□□□ 0.99
MTRF1-206ENST00000473492 ZRANB1Q9UGI0 708 aa21.18■□□□□ 0.98
MTRF1-206ENST00000473492 PAK3O75914 559 aaPredicted RBP21.11■□□□□ 0.97
MTRF1-206ENST00000473492 GABBR2O75899 941 aa21.06■□□□□ 0.96
MTRF1-206ENST00000473492 TSPYL2Q9H2G4 693 aaPredicted RBP21.02■□□□□ 0.96
MTRF1-206ENST00000473492 VASPP50552 380 aaPredicted RBP20.99■□□□□ 0.95
MTRF1-206ENST00000473492 ZBTB47Q9UFB7 747 aaPredicted RBP20.99■□□□□ 0.95
MTRF1-206ENST00000473492 ZNF579Q8NAF0 562 aaKnown RBP20.96■□□□□ 0.95
MTRF1-206ENST00000473492 PHF12Q96QT6 1004 aa20.93■□□□□ 0.94
MTRF1-206ENST00000473492 RASEFQ8IZ41 740 aa20.89■□□□□ 0.93
MTRF1-206ENST00000473492 KLHL34Q8N239 644 aa20.89■□□□□ 0.93
MTRF1-206ENST00000473492 NUBP1P53384 320 aa20.8■□□□□ 0.92
MTRF1-206ENST00000473492 CLCN6P51797 869 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 1252.2 ms