RNA–Protein interactions for RNA: ENST00000473380.1

MSL3-211, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-211ENST00000473380 AEBP2Q6ZN18 517 aaPredicted RBP21.03■□□□□ 0.96
MSL3-211ENST00000473380 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
MSL3-211ENST00000473380 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
MSL3-211ENST00000473380 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
MSL3-211ENST00000473380 FOXD1Q16676 465 aa16.7■□□□□ 0.26
MSL3-211ENST00000473380 PLPPR3Q6T4P5 718 aa15.81■□□□□ 0.12
MSL3-211ENST00000473380 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
MSL3-211ENST00000473380 PIAS4Q8N2W9 510 aaPredicted RBP15.58■□□□□ 0.08
MSL3-211ENST00000473380 ADRA2BP18089 450 aa15.57■□□□□ 0.08
MSL3-211ENST00000473380 MSH5O43196 834 aa15.56■□□□□ 0.08
MSL3-211ENST00000473380 POTEDQ86YR6 584 aa15.35■□□□□ 0.05
MSL3-211ENST00000473380 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
MSL3-211ENST00000473380 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
MSL3-211ENST00000473380 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
MSL3-211ENST00000473380 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
MSL3-211ENST00000473380 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
MSL3-211ENST00000473380 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
MSL3-211ENST00000473380 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
MSL3-211ENST00000473380 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
MSL3-211ENST00000473380 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
MSL3-211ENST00000473380 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
MSL3-211ENST00000473380 NCBP3Q53F19 620 aaKnown RBP13.28□□□□□ -0.28
MSL3-211ENST00000473380 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
MSL3-211ENST00000473380 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
MSL3-211ENST00000473380 DNAJC5BQ9UF47 199 aa13.05□□□□□ -0.32
MSL3-211ENST00000473380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13□□□□□ -0.33
MSL3-211ENST00000473380 KCNA4P22459 653 aa12.91□□□□□ -0.34
MSL3-211ENST00000473380 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
MSL3-211ENST00000473380 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
MSL3-211ENST00000473380 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
MSL3-211ENST00000473380 CAPN15O75808 1086 aa12.55□□□□□ -0.4
MSL3-211ENST00000473380 DSG3P32926 999 aa12.47□□□□□ -0.41
MSL3-211ENST00000473380 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
MSL3-211ENST00000473380 ABCB7O75027 752 aa12.3□□□□□ -0.44
MSL3-211ENST00000473380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
MSL3-211ENST00000473380 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
MSL3-211ENST00000473380 APLP2Q06481 763 aa12.24□□□□□ -0.45
MSL3-211ENST00000473380 ZNF219Q9P2Y4 722 aaPredicted RBP12.24□□□□□ -0.45
MSL3-211ENST00000473380 SAMD1Q6SPF0 538 aaPredicted RBP12.21□□□□□ -0.45
MSL3-211ENST00000473380 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
MSL3-211ENST00000473380 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
MSL3-211ENST00000473380 POLA2Q14181 598 aa12□□□□□ -0.49
MSL3-211ENST00000473380 POTEHQ6S545 545 aa12□□□□□ -0.49
MSL3-211ENST00000473380 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
MSL3-211ENST00000473380 ATF5Q9Y2D1 282 aaPredicted RBP11.97□□□□□ -0.49
MSL3-211ENST00000473380 ZBTB22O15209 634 aa11.89□□□□□ -0.51
MSL3-211ENST00000473380 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
MSL3-211ENST00000473380 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
MSL3-211ENST00000473380 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
MSL3-211ENST00000473380 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
MSL3-211ENST00000473380 ATXN8OSP0DMR3 200 aa11.57□□□□□ -0.56
MSL3-211ENST00000473380 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
MSL3-211ENST00000473380 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
MSL3-211ENST00000473380 PITPNM1O00562 1244 aa11.4□□□□□ -0.58
MSL3-211ENST00000473380 FBLN2P98095 1184 aa11.39□□□□□ -0.59
MSL3-211ENST00000473380 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
MSL3-211ENST00000473380 MKRN4PQ13434 485 aaPredicted RBP11.37□□□□□ -0.59
MSL3-211ENST00000473380 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
MSL3-211ENST00000473380 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
MSL3-211ENST00000473380 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
MSL3-211ENST00000473380 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.6
MSL3-211ENST00000473380 CSRNP3Q8WYN3 585 aa11.28□□□□□ -0.6
MSL3-211ENST00000473380 ZNF692Q9BU19 519 aaPredicted RBP11.23□□□□□ -0.61
MSL3-211ENST00000473380 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
MSL3-211ENST00000473380 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
MSL3-211ENST00000473380 HAX1O00165 279 aa11.19□□□□□ -0.62
MSL3-211ENST00000473380 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
MSL3-211ENST00000473380 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
MSL3-211ENST00000473380 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
MSL3-211ENST00000473380 EVX2Q03828 476 aa11.12□□□□□ -0.63
MSL3-211ENST00000473380 PRKAR2AP13861 404 aaKnown RBP11.1□□□□□ -0.63
MSL3-211ENST00000473380 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
MSL3-211ENST00000473380 CHADLQ6NUI6 762 aa11.02□□□□□ -0.65
MSL3-211ENST00000473380 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
MSL3-211ENST00000473380 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
MSL3-211ENST00000473380 GABBR2O75899 941 aa10.8□□□□□ -0.68
MSL3-211ENST00000473380 SPDYE4A6NLX3 237 aa10.79□□□□□ -0.68
MSL3-211ENST00000473380 FARP1Q9Y4F1 1045 aaPredicted RBP10.78□□□□□ -0.68
MSL3-211ENST00000473380 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
MSL3-211ENST00000473380 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
MSL3-211ENST00000473380 STAG3Q9UJ98 1225 aa10.67□□□□□ -0.7
MSL3-211ENST00000473380 POTEIP0CG38 1075 aa10.6□□□□□ -0.71
MSL3-211ENST00000473380 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
MSL3-211ENST00000473380 LHX8Q68G74 356 aa10.54□□□□□ -0.72
MSL3-211ENST00000473380 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
MSL3-211ENST00000473380 MNX1P50219 401 aaPredicted RBP10.51□□□□□ -0.73
MSL3-211ENST00000473380 GALR2O43603 387 aaPredicted RBP10.48□□□□□ -0.73
MSL3-211ENST00000473380 PHF12Q96QT6 1004 aa10.48□□□□□ -0.73
MSL3-211ENST00000473380 CLCN6P51797 869 aa10.47□□□□□ -0.73
MSL3-211ENST00000473380 PROM2Q8N271 834 aa10.47□□□□□ -0.73
MSL3-211ENST00000473380 DCBLD2Q96PD2 775 aa10.47□□□□□ -0.73
MSL3-211ENST00000473380 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
MSL3-211ENST00000473380 PAK3O75914 559 aaPredicted RBP10.43□□□□□ -0.74
MSL3-211ENST00000473380 TSPYL2Q9H2G4 693 aaPredicted RBP10.35□□□□□ -0.75
MSL3-211ENST00000473380 MS4A3Q96HJ5 214 aa10.32□□□□□ -0.76
MSL3-211ENST00000473380 PELP1Q8IZL8 1130 aaKnown RBP10.31□□□□□ -0.76
MSL3-211ENST00000473380 MIER1Q8N108 512 aa10.3□□□□□ -0.76
MSL3-211ENST00000473380 POTEB2H3BUK9 544 aa10.27□□□□□ -0.77
MSL3-211ENST00000473380 CCDC61Q9Y6R9 512 aa10.26□□□□□ -0.77
MSL3-211ENST00000473380 FKBP8Q14318 412 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms