RNA–Protein interactions for RNA: ENST00000473368.1

TRIM16-204, Transcript of tripartite motif containing 16, humanhuman

TSL 2

Gene TRIM16, Length 471 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-204ENST00000473368 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
TRIM16-204ENST00000473368 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
TRIM16-204ENST00000473368 PHF23Q9BUL5 403 aaPredicted RBP16.67■□□□□ 0.26
TRIM16-204ENST00000473368 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
TRIM16-204ENST00000473368 FOXD1Q16676 465 aa15.48■□□□□ 0.07
TRIM16-204ENST00000473368 PLPPR3Q6T4P5 718 aa15.32■□□□□ 0.04
TRIM16-204ENST00000473368 PPP6R1Q9UPN7 881 aa14.78□□□□□ -0.04
TRIM16-204ENST00000473368 ADRA2BP18089 450 aa14.74□□□□□ -0.05
TRIM16-204ENST00000473368 PIAS4Q8N2W9 510 aaPredicted RBP14.53□□□□□ -0.08
TRIM16-204ENST00000473368 MSH5O43196 834 aa14.33□□□□□ -0.12
TRIM16-204ENST00000473368 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
TRIM16-204ENST00000473368 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
TRIM16-204ENST00000473368 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
TRIM16-204ENST00000473368 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
TRIM16-204ENST00000473368 DMRT2Q9Y5R5 561 aa13.27□□□□□ -0.29
TRIM16-204ENST00000473368 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
TRIM16-204ENST00000473368 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
TRIM16-204ENST00000473368 KCNA4P22459 653 aa12.97□□□□□ -0.33
TRIM16-204ENST00000473368 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
TRIM16-204ENST00000473368 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
TRIM16-204ENST00000473368 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
TRIM16-204ENST00000473368 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
TRIM16-204ENST00000473368 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
TRIM16-204ENST00000473368 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
TRIM16-204ENST00000473368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRIM16-204ENST00000473368 RNF39Q9H2S5 420 aa12.27□□□□□ -0.45
TRIM16-204ENST00000473368 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
TRIM16-204ENST00000473368 C1QBPQ07021 282 aaKnown RBP12.11□□□□□ -0.47
TRIM16-204ENST00000473368 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
TRIM16-204ENST00000473368 CACNB1Q02641 598 aaPredicted RBP12.06□□□□□ -0.48
TRIM16-204ENST00000473368 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
TRIM16-204ENST00000473368 ZBTB22O15209 634 aa11.94□□□□□ -0.5
TRIM16-204ENST00000473368 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
TRIM16-204ENST00000473368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.88□□□□□ -0.51
TRIM16-204ENST00000473368 HNRNPUL2Q1KMD3 747 aaKnown RBP11.88□□□□□ -0.51
TRIM16-204ENST00000473368 SAMD1Q6SPF0 538 aaPredicted RBP11.83□□□□□ -0.52
TRIM16-204ENST00000473368 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
TRIM16-204ENST00000473368 APLP2Q06481 763 aa11.79□□□□□ -0.52
TRIM16-204ENST00000473368 CAPN15O75808 1086 aa11.76□□□□□ -0.53
TRIM16-204ENST00000473368 EHMT2Q96KQ7 1210 aa11.75□□□□□ -0.53
TRIM16-204ENST00000473368 CSRNP3Q8WYN3 585 aa11.74□□□□□ -0.53
TRIM16-204ENST00000473368 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
TRIM16-204ENST00000473368 ZNF219Q9P2Y4 722 aaPredicted RBP11.66□□□□□ -0.54
TRIM16-204ENST00000473368 DSG3P32926 999 aa11.62□□□□□ -0.55
TRIM16-204ENST00000473368 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
TRIM16-204ENST00000473368 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
TRIM16-204ENST00000473368 ABCB7O75027 752 aa11.51□□□□□ -0.57
TRIM16-204ENST00000473368 POLA2Q14181 598 aa11.45□□□□□ -0.58
TRIM16-204ENST00000473368 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
TRIM16-204ENST00000473368 FBLN2P98095 1184 aa11.11□□□□□ -0.63
TRIM16-204ENST00000473368 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
TRIM16-204ENST00000473368 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
TRIM16-204ENST00000473368 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
TRIM16-204ENST00000473368 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
TRIM16-204ENST00000473368 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
TRIM16-204ENST00000473368 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
TRIM16-204ENST00000473368 AKT1S1Q96B36 256 aa10.9□□□□□ -0.66
TRIM16-204ENST00000473368 ZNF692Q9BU19 519 aaPredicted RBP10.86□□□□□ -0.67
TRIM16-204ENST00000473368 SSUH2Q9Y2M2 353 aa10.82□□□□□ -0.68
TRIM16-204ENST00000473368 REM2Q8IYK8 340 aaPredicted RBP10.8□□□□□ -0.68
TRIM16-204ENST00000473368 SPDYE4A6NLX3 237 aa10.76□□□□□ -0.69
TRIM16-204ENST00000473368 PABPN1Q86U42 306 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRIM16-204ENST00000473368 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
TRIM16-204ENST00000473368 PITPNM1O00562 1244 aa10.67□□□□□ -0.7
TRIM16-204ENST00000473368 SPDYE1Q8NFV5 336 aaPredicted RBP10.64□□□□□ -0.71
TRIM16-204ENST00000473368 FKBP8Q14318 412 aa10.6□□□□□ -0.71
TRIM16-204ENST00000473368 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
TRIM16-204ENST00000473368 PROM2Q8N271 834 aa10.57□□□□□ -0.72
TRIM16-204ENST00000473368 POTEHQ6S545 545 aa10.54□□□□□ -0.72
TRIM16-204ENST00000473368 FXR2P51116 673 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRIM16-204ENST00000473368 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
TRIM16-204ENST00000473368 PRR29P0C7W0 189 aa10.49□□□□□ -0.73
TRIM16-204ENST00000473368 STAG3Q9UJ98 1225 aa10.49□□□□□ -0.73
TRIM16-204ENST00000473368 PRKAR2AP13861 404 aaKnown RBP10.4□□□□□ -0.74
TRIM16-204ENST00000473368 CHADLQ6NUI6 762 aa10.36□□□□□ -0.75
TRIM16-204ENST00000473368 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
TRIM16-204ENST00000473368 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
TRIM16-204ENST00000473368 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
TRIM16-204ENST00000473368 MIER1Q8N108 512 aa10.22□□□□□ -0.77
TRIM16-204ENST00000473368 HAX1O00165 279 aa10.21□□□□□ -0.77
TRIM16-204ENST00000473368 MNX1P50219 401 aaPredicted RBP10.21□□□□□ -0.77
TRIM16-204ENST00000473368 PLEKHG5O94827 1062 aa10.17□□□□□ -0.78
TRIM16-204ENST00000473368 PLCD3Q8N3E9 789 aa10.17□□□□□ -0.78
TRIM16-204ENST00000473368 C19orf67A6NJJ6 358 aa10.16□□□□□ -0.78
TRIM16-204ENST00000473368 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRIM16-204ENST00000473368 VASPP50552 380 aaPredicted RBP10.13□□□□□ -0.79
TRIM16-204ENST00000473368 EVX2Q03828 476 aa10.13□□□□□ -0.79
TRIM16-204ENST00000473368 CD44P16070 742 aaKnown RBP10.09□□□□□ -0.79
TRIM16-204ENST00000473368 ZBTB47Q9UFB7 747 aaPredicted RBP10.08□□□□□ -0.8
TRIM16-204ENST00000473368 SP7Q8TDD2 431 aaPredicted RBP10.05□□□□□ -0.8
TRIM16-204ENST00000473368 IFNLR1Q8IU57 520 aaPredicted RBP10.01□□□□□ -0.81
TRIM16-204ENST00000473368 ZRANB1Q9UGI0 708 aa10.01□□□□□ -0.81
TRIM16-204ENST00000473368 KLHL34Q8N239 644 aa10□□□□□ -0.81
TRIM16-204ENST00000473368 PAK3O75914 559 aaPredicted RBP9.99□□□□□ -0.81
TRIM16-204ENST00000473368 NUBP1P53384 320 aa9.99□□□□□ -0.81
TRIM16-204ENST00000473368 RASEFQ8IZ41 740 aa9.98□□□□□ -0.81
TRIM16-204ENST00000473368 TSPYL2Q9H2G4 693 aaPredicted RBP9.96□□□□□ -0.82
TRIM16-204ENST00000473368 ZNF579Q8NAF0 562 aaKnown RBP9.95□□□□□ -0.82
TRIM16-204ENST00000473368 GABBR2O75899 941 aa9.92□□□□□ -0.82
TRIM16-204ENST00000473368 CCDC61Q9Y6R9 512 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms