RNA–Protein interactions for RNA: ENST00000473287.1

TMCO3-206, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-206ENST00000473287 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
TMCO3-206ENST00000473287 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
TMCO3-206ENST00000473287 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
TMCO3-206ENST00000473287 SENP3Q9H4L4 574 aaPredicted RBP22.31■■□□□ 1.16
TMCO3-206ENST00000473287 FOXD1Q16676 465 aa20.77■□□□□ 0.92
TMCO3-206ENST00000473287 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
TMCO3-206ENST00000473287 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
TMCO3-206ENST00000473287 ADRA2BP18089 450 aa19.75■□□□□ 0.75
TMCO3-206ENST00000473287 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
TMCO3-206ENST00000473287 MSH5O43196 834 aa19.21■□□□□ 0.67
TMCO3-206ENST00000473287 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
TMCO3-206ENST00000473287 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
TMCO3-206ENST00000473287 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
TMCO3-206ENST00000473287 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
TMCO3-206ENST00000473287 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
TMCO3-206ENST00000473287 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
TMCO3-206ENST00000473287 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
TMCO3-206ENST00000473287 KCNA4P22459 653 aa17.4■□□□□ 0.38
TMCO3-206ENST00000473287 HOXD11P31277 338 aaPredicted RBP17.34■□□□□ 0.37
TMCO3-206ENST00000473287 RNF216Q9NWF9 866 aaPredicted RBP17.33■□□□□ 0.36
TMCO3-206ENST00000473287 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
TMCO3-206ENST00000473287 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
TMCO3-206ENST00000473287 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
TMCO3-206ENST00000473287 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
TMCO3-206ENST00000473287 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
TMCO3-206ENST00000473287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.233e-8■□□□□ 8.6
TMCO3-206ENST00000473287 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
TMCO3-206ENST00000473287 U3KPZ7 1027 aaPredicted RBP16.24■□□□□ 0.19
TMCO3-206ENST00000473287 C1QBPQ07021 282 aaKnown RBP16.22■□□□□ 0.19
TMCO3-206ENST00000473287 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
TMCO3-206ENST00000473287 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
TMCO3-206ENST00000473287 ZBTB22O15209 634 aa16.03■□□□□ 0.16
TMCO3-206ENST00000473287 MYCNP04198 464 aaPredicted RBP15.96■□□□□ 0.15
TMCO3-206ENST00000473287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
TMCO3-206ENST00000473287 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
TMCO3-206ENST00000473287 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
TMCO3-206ENST00000473287 SAMD1Q6SPF0 538 aaPredicted RBP15.83■□□□□ 0.12
TMCO3-206ENST00000473287 APLP2Q06481 763 aa15.76■□□□□ 0.11
TMCO3-206ENST00000473287 CAPN15O75808 1086 aa15.75■□□□□ 0.11
TMCO3-206ENST00000473287 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
TMCO3-206ENST00000473287 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
TMCO3-206ENST00000473287 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
TMCO3-206ENST00000473287 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
TMCO3-206ENST00000473287 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
TMCO3-206ENST00000473287 DSG3P32926 999 aa15.58■□□□□ 0.08
TMCO3-206ENST00000473287 ATXN8OSP0DMR3 200 aa15.51■□□□□ 0.07
TMCO3-206ENST00000473287 ABCB7O75027 752 aa15.46■□□□□ 0.07
TMCO3-206ENST00000473287 POLA2Q14181 598 aa15.32■□□□□ 0.04
TMCO3-206ENST00000473287 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
TMCO3-206ENST00000473287 MKRN4PQ13434 485 aaPredicted RBP14.9□□□□□ -0.02
TMCO3-206ENST00000473287 FBLN2P98095 1184 aa14.87□□□□□ -0.03
TMCO3-206ENST00000473287 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
TMCO3-206ENST00000473287 RBM42Q9BTD8 480 aaKnown RBP14.82□□□□□ -0.04
TMCO3-206ENST00000473287 SPDYE2BA6NHP3 402 aa14.63□□□□□ -0.07
TMCO3-206ENST00000473287 SPDYE6P0CI01 402 aa14.63□□□□□ -0.07
TMCO3-206ENST00000473287 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
TMCO3-206ENST00000473287 AKT1S1Q96B36 256 aa14.6□□□□□ -0.07
TMCO3-206ENST00000473287 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
TMCO3-206ENST00000473287 ZNF692Q9BU19 519 aaPredicted RBP14.52□□□□□ -0.09
TMCO3-206ENST00000473287 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
TMCO3-206ENST00000473287 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
TMCO3-206ENST00000473287 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
TMCO3-206ENST00000473287 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
TMCO3-206ENST00000473287 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
TMCO3-206ENST00000473287 SPDYE1Q8NFV5 336 aaPredicted RBP14.24□□□□□ -0.13
TMCO3-206ENST00000473287 FKBP8Q14318 412 aa14.19□□□□□ -0.14
TMCO3-206ENST00000473287 PROM2Q8N271 834 aa14.19□□□□□ -0.14
TMCO3-206ENST00000473287 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
TMCO3-206ENST00000473287 POTEHQ6S545 545 aa14.14□□□□□ -0.15
TMCO3-206ENST00000473287 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.15
TMCO3-206ENST00000473287 PIP4P2Q8N4L2 257 aa14.1□□□□□ -0.15
TMCO3-206ENST00000473287 PRR29P0C7W0 189 aa14.02□□□□□ -0.17
TMCO3-206ENST00000473287 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
TMCO3-206ENST00000473287 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
TMCO3-206ENST00000473287 CHADLQ6NUI6 762 aa13.9□□□□□ -0.18
TMCO3-206ENST00000473287 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
TMCO3-206ENST00000473287 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
TMCO3-206ENST00000473287 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
TMCO3-206ENST00000473287 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
TMCO3-206ENST00000473287 HAX1O00165 279 aa13.66□□□□□ -0.22
TMCO3-206ENST00000473287 MIER1Q8N108 512 aa13.65□□□□□ -0.22
TMCO3-206ENST00000473287 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
TMCO3-206ENST00000473287 EVX2Q03828 476 aa13.6□□□□□ -0.23
TMCO3-206ENST00000473287 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
TMCO3-206ENST00000473287 VASPP50552 380 aaPredicted RBP13.58□□□□□ -0.24
TMCO3-206ENST00000473287 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
TMCO3-206ENST00000473287 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
TMCO3-206ENST00000473287 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
TMCO3-206ENST00000473287 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
TMCO3-206ENST00000473287 ZBTB47Q9UFB7 747 aaPredicted RBP13.46□□□□□ -0.25
TMCO3-206ENST00000473287 ZRANB1Q9UGI0 708 aa13.4□□□□□ -0.26
TMCO3-206ENST00000473287 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
TMCO3-206ENST00000473287 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
TMCO3-206ENST00000473287 NUBP1P53384 320 aa13.38□□□□□ -0.27
TMCO3-206ENST00000473287 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
TMCO3-206ENST00000473287 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
TMCO3-206ENST00000473287 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
TMCO3-206ENST00000473287 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
TMCO3-206ENST00000473287 GABBR2O75899 941 aa13.29□□□□□ -0.28
TMCO3-206ENST00000473287 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms