RNA–Protein interactions for RNA: ENST00000473224.1

PDSS1-203, Transcript of decaprenyl diphosphate synthase subunit 1, humanhuman

TSL 5

Gene PDSS1, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1-203ENST00000473224 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
PDSS1-203ENST00000473224 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
PDSS1-203ENST00000473224 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
PDSS1-203ENST00000473224 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
PDSS1-203ENST00000473224 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
PDSS1-203ENST00000473224 FOXD1Q16676 465 aa18.6■□□□□ 0.57
PDSS1-203ENST00000473224 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
PDSS1-203ENST00000473224 ADRA2BP18089 450 aa17.83■□□□□ 0.44
PDSS1-203ENST00000473224 PIAS4Q8N2W9 510 aaPredicted RBP17.48■□□□□ 0.39
PDSS1-203ENST00000473224 MSH5O43196 834 aa17.12■□□□□ 0.33
PDSS1-203ENST00000473224 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
PDSS1-203ENST00000473224 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
PDSS1-203ENST00000473224 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
PDSS1-203ENST00000473224 KCNA4P22459 653 aa16.12■□□□□ 0.17
PDSS1-203ENST00000473224 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
PDSS1-203ENST00000473224 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
PDSS1-203ENST00000473224 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
PDSS1-203ENST00000473224 NPM3O75607 178 aaKnown RBP15.84■□□□□ 0.13
PDSS1-203ENST00000473224 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
PDSS1-203ENST00000473224 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
PDSS1-203ENST00000473224 POTEDQ86YR6 584 aa15.6■□□□□ 0.09
PDSS1-203ENST00000473224 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
PDSS1-203ENST00000473224 SLC4A1APQ9BWU0 796 aaKnown RBP15.3■□□□□ 0.04
PDSS1-203ENST00000473224 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
PDSS1-203ENST00000473224 SLC4A2P04920 1241 aa15□□□□□ -0.01
PDSS1-203ENST00000473224 ZBTB22O15209 634 aa14.89□□□□□ -0.03
PDSS1-203ENST00000473224 FOXD4L1Q9NU39 408 aa14.84□□□□□ -0.03
PDSS1-203ENST00000473224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
PDSS1-203ENST00000473224 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
PDSS1-203ENST00000473224 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
PDSS1-203ENST00000473224 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
PDSS1-203ENST00000473224 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
PDSS1-203ENST00000473224 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
PDSS1-203ENST00000473224 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
PDSS1-203ENST00000473224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
PDSS1-203ENST00000473224 HNRNPUL2Q1KMD3 747 aaKnown RBP14.45□□□□□ -0.1
PDSS1-203ENST00000473224 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
PDSS1-203ENST00000473224 ATXN8OSP0DMR3 200 aa14.35□□□□□ -0.11
PDSS1-203ENST00000473224 APLP2Q06481 763 aa14.26□□□□□ -0.13
PDSS1-203ENST00000473224 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
PDSS1-203ENST00000473224 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
PDSS1-203ENST00000473224 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
PDSS1-203ENST00000473224 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
PDSS1-203ENST00000473224 CAPN15O75808 1086 aa14.1□□□□□ -0.15
PDSS1-203ENST00000473224 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
PDSS1-203ENST00000473224 DSG3P32926 999 aa14□□□□□ -0.17
PDSS1-203ENST00000473224 ABCB7O75027 752 aa13.85□□□□□ -0.19
PDSS1-203ENST00000473224 POLA2Q14181 598 aa13.85□□□□□ -0.19
PDSS1-203ENST00000473224 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
PDSS1-203ENST00000473224 ZBTB12Q9Y330 459 aaPredicted RBP13.65□□□□□ -0.22
PDSS1-203ENST00000473224 FBLN2P98095 1184 aa13.55□□□□□ -0.24
PDSS1-203ENST00000473224 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
PDSS1-203ENST00000473224 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
PDSS1-203ENST00000473224 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
PDSS1-203ENST00000473224 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
PDSS1-203ENST00000473224 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
PDSS1-203ENST00000473224 SSUH2Q9Y2M2 353 aa13.28□□□□□ -0.28
PDSS1-203ENST00000473224 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
PDSS1-203ENST00000473224 FKBP8Q14318 412 aa13.26□□□□□ -0.29
PDSS1-203ENST00000473224 PROM2Q8N271 834 aa13.22□□□□□ -0.29
PDSS1-203ENST00000473224 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
PDSS1-203ENST00000473224 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
PDSS1-203ENST00000473224 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
PDSS1-203ENST00000473224 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
PDSS1-203ENST00000473224 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
PDSS1-203ENST00000473224 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
PDSS1-203ENST00000473224 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
PDSS1-203ENST00000473224 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
PDSS1-203ENST00000473224 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
PDSS1-203ENST00000473224 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
PDSS1-203ENST00000473224 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
PDSS1-203ENST00000473224 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDSS1-203ENST00000473224 PRR29P0C7W0 189 aa12.65□□□□□ -0.38
PDSS1-203ENST00000473224 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
PDSS1-203ENST00000473224 CREBZFQ9NS37 354 aa12.6□□□□□ -0.39
PDSS1-203ENST00000473224 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
PDSS1-203ENST00000473224 IFNLR1Q8IU57 520 aaPredicted RBP12.51□□□□□ -0.41
PDSS1-203ENST00000473224 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
PDSS1-203ENST00000473224 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
PDSS1-203ENST00000473224 MIER1Q8N108 512 aa12.49□□□□□ -0.41
PDSS1-203ENST00000473224 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
PDSS1-203ENST00000473224 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
PDSS1-203ENST00000473224 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
PDSS1-203ENST00000473224 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
PDSS1-203ENST00000473224 NUBP1P53384 320 aa12.33□□□□□ -0.44
PDSS1-203ENST00000473224 POTEHQ6S545 545 aa12.33□□□□□ -0.44
PDSS1-203ENST00000473224 SPOCK2Q92563 424 aa12.31□□□□□ -0.44
PDSS1-203ENST00000473224 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
PDSS1-203ENST00000473224 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
PDSS1-203ENST00000473224 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
PDSS1-203ENST00000473224 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
PDSS1-203ENST00000473224 CD44P16070 742 aaKnown RBP12.14□□□□□ -0.47
PDSS1-203ENST00000473224 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
PDSS1-203ENST00000473224 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
PDSS1-203ENST00000473224 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
PDSS1-203ENST00000473224 PKD2Q13563 968 aa12.11□□□□□ -0.47
PDSS1-203ENST00000473224 GSE1Q14687 1217 aa12.11□□□□□ -0.47
PDSS1-203ENST00000473224 EVX2Q03828 476 aa12.09□□□□□ -0.47
PDSS1-203ENST00000473224 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
PDSS1-203ENST00000473224 HAX1O00165 279 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms