RNA–Protein interactions for RNA: ENST00000473173.1

CNTN4-212, Transcript of contactin 4, humanhuman

TSL 4

Gene CNTN4, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-212ENST00000473173 AEBP2Q6ZN18 517 aaPredicted RBP27.37■■□□□ 1.97
CNTN4-212ENST00000473173 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
CNTN4-212ENST00000473173 PHF23Q9BUL5 403 aaPredicted RBP23.77■■□□□ 1.4
CNTN4-212ENST00000473173 SENP3Q9H4L4 574 aaPredicted RBP23.31■■□□□ 1.32
CNTN4-212ENST00000473173 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
CNTN4-212ENST00000473173 FOXD1Q16676 465 aa21.51■■□□□ 1.03
CNTN4-212ENST00000473173 ADRA2BP18089 450 aa20.9■□□□□ 0.94
CNTN4-212ENST00000473173 PPP6R1Q9UPN7 881 aa20.87■□□□□ 0.93
CNTN4-212ENST00000473173 PIAS4Q8N2W9 510 aaPredicted RBP20.42■□□□□ 0.86
CNTN4-212ENST00000473173 MSH5O43196 834 aa19.84■□□□□ 0.77
CNTN4-212ENST00000473173 PPP4R3CPQ6ZMV5 832 aa19.53■□□□□ 0.72
CNTN4-212ENST00000473173 KCNA4P22459 653 aa19.36■□□□□ 0.69
CNTN4-212ENST00000473173 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
CNTN4-212ENST00000473173 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
CNTN4-212ENST00000473173 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
CNTN4-212ENST00000473173 MAPK8IP2Q13387 824 aaPredicted RBP18.85■□□□□ 0.61
CNTN4-212ENST00000473173 NPM3O75607 178 aaKnown RBP18.81■□□□□ 0.6
CNTN4-212ENST00000473173 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
CNTN4-212ENST00000473173 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
CNTN4-212ENST00000473173 RNF216Q9NWF9 866 aaPredicted RBP18.52■□□□□ 0.56
CNTN4-212ENST00000473173 HOXD11P31277 338 aaPredicted RBP18.34■□□□□ 0.53
CNTN4-212ENST00000473173 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.52
CNTN4-212ENST00000473173 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
CNTN4-212ENST00000473173 CSRNP3Q8WYN3 585 aa17.94■□□□□ 0.46
CNTN4-212ENST00000473173 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
CNTN4-212ENST00000473173 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
CNTN4-212ENST00000473173 ZBTB22O15209 634 aa17.78■□□□□ 0.44
CNTN4-212ENST00000473173 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
CNTN4-212ENST00000473173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
CNTN4-212ENST00000473173 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
CNTN4-212ENST00000473173 MYCNP04198 464 aaPredicted RBP17.44■□□□□ 0.38
CNTN4-212ENST00000473173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
CNTN4-212ENST00000473173 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
CNTN4-212ENST00000473173 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
CNTN4-212ENST00000473173 ATXN8OSP0DMR3 200 aa17.2■□□□□ 0.34
CNTN4-212ENST00000473173 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
CNTN4-212ENST00000473173 APLP2Q06481 763 aa17.01■□□□□ 0.31
CNTN4-212ENST00000473173 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
CNTN4-212ENST00000473173 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
CNTN4-212ENST00000473173 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
CNTN4-212ENST00000473173 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
CNTN4-212ENST00000473173 CAPN15O75808 1086 aa16.62■□□□□ 0.25
CNTN4-212ENST00000473173 SPINK5Q9NQ38 1064 aaPredicted RBP16.62■□□□□ 0.25
CNTN4-212ENST00000473173 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
CNTN4-212ENST00000473173 POLA2Q14181 598 aa16.37■□□□□ 0.21
CNTN4-212ENST00000473173 CACNB1Q02641 598 aaPredicted RBP16.35■□□□□ 0.21
CNTN4-212ENST00000473173 ABCB7O75027 752 aa16.28■□□□□ 0.2
CNTN4-212ENST00000473173 FBLN2P98095 1184 aa16.27■□□□□ 0.2
CNTN4-212ENST00000473173 FKBP8Q14318 412 aa16.26■□□□□ 0.19
CNTN4-212ENST00000473173 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
CNTN4-212ENST00000473173 DSG3P32926 999 aa16.22■□□□□ 0.19
CNTN4-212ENST00000473173 MKRN4PQ13434 485 aaPredicted RBP16.13■□□□□ 0.17
CNTN4-212ENST00000473173 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
CNTN4-212ENST00000473173 OSCARQ8IYS5 282 aa15.81■□□□□ 0.12
CNTN4-212ENST00000473173 SPDYE2BA6NHP3 402 aa15.76■□□□□ 0.11
CNTN4-212ENST00000473173 SPDYE6P0CI01 402 aa15.76■□□□□ 0.11
CNTN4-212ENST00000473173 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
CNTN4-212ENST00000473173 PROM2Q8N271 834 aa15.73■□□□□ 0.11
CNTN4-212ENST00000473173 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
CNTN4-212ENST00000473173 FBXO3Q9UK99 471 aa15.69■□□□□ 0.1
CNTN4-212ENST00000473173 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
CNTN4-212ENST00000473173 RBM42Q9BTD8 480 aaKnown RBP15.57■□□□□ 0.08
CNTN4-212ENST00000473173 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.07
CNTN4-212ENST00000473173 VASPP50552 380 aaPredicted RBP15.4■□□□□ 0.06
CNTN4-212ENST00000473173 STAG3Q9UJ98 1225 aa15.39■□□□□ 0.05
CNTN4-212ENST00000473173 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
CNTN4-212ENST00000473173 AKT1S1Q96B36 256 aa15.38■□□□□ 0.05
CNTN4-212ENST00000473173 SPDYE1Q8NFV5 336 aaPredicted RBP15.24■□□□□ 0.03
CNTN4-212ENST00000473173 RTN4Q9NQC3 1192 aaKnown RBP15.24■□□□□ 0.03
CNTN4-212ENST00000473173 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
CNTN4-212ENST00000473173 PLCD3Q8N3E9 789 aa15.18■□□□□ 0.02
CNTN4-212ENST00000473173 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
CNTN4-212ENST00000473173 PLEKHG5O94827 1062 aa15.15■□□□□ 0.02
CNTN4-212ENST00000473173 MIER1Q8N108 512 aa15.14■□□□□ 0.01
CNTN4-212ENST00000473173 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
CNTN4-212ENST00000473173 KLHL34Q8N239 644 aa15.1■□□□□ 0.01
CNTN4-212ENST00000473173 ZBTB47Q9UFB7 747 aaPredicted RBP15.06■□□□□ 0
CNTN4-212ENST00000473173 PRR29P0C7W0 189 aa15.05■□□□□ -0
CNTN4-212ENST00000473173 PITPNM1O00562 1244 aa15.01□□□□□ -0.01
CNTN4-212ENST00000473173 SPOCK2Q92563 424 aa15□□□□□ -0.01
CNTN4-212ENST00000473173 CREBZFQ9NS37 354 aa14.86□□□□□ -0.03
CNTN4-212ENST00000473173 PKD2Q13563 968 aa14.76□□□□□ -0.05
CNTN4-212ENST00000473173 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
CNTN4-212ENST00000473173 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
CNTN4-212ENST00000473173 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
CNTN4-212ENST00000473173 CIZ1Q9ULV3 898 aaPredicted RBP14.72□□□□□ -0.05
CNTN4-212ENST00000473173 ECM2O94769 699 aaPredicted RBP14.68□□□□□ -0.06
CNTN4-212ENST00000473173 GSE1Q14687 1217 aa14.68□□□□□ -0.06
CNTN4-212ENST00000473173 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
CNTN4-212ENST00000473173 NUBP1P53384 320 aa14.67□□□□□ -0.06
CNTN4-212ENST00000473173 CHADLQ6NUI6 762 aa14.67□□□□□ -0.06
CNTN4-212ENST00000473173 PRKAR2AP13861 404 aaKnown RBP14.66□□□□□ -0.06
CNTN4-212ENST00000473173 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
CNTN4-212ENST00000473173 FAM212AQ96EL1 285 aa14.65□□□□□ -0.06
CNTN4-212ENST00000473173 DCAF8L2P0C7V8 631 aa14.61□□□□□ -0.07
CNTN4-212ENST00000473173 DCAF8Q5TAQ9 597 aa14.61□□□□□ -0.07
CNTN4-212ENST00000473173 FARP1Q9Y4F1 1045 aaPredicted RBP14.61□□□□□ -0.07
CNTN4-212ENST00000473173 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
CNTN4-212ENST00000473173 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
CNTN4-212ENST00000473173 RGL2O15211 777 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms