RNA–Protein interactions for RNA: ENST00000473083.1

NT5C3A-211, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 2

Gene NT5C3A, Length 369 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-211ENST00000473083 AEBP2Q6ZN18 517 aaPredicted RBP27.02■■□□□ 1.92
NT5C3A-211ENST00000473083 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
NT5C3A-211ENST00000473083 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
NT5C3A-211ENST00000473083 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
NT5C3A-211ENST00000473083 FOXD1Q16676 465 aa21.6■■□□□ 1.05
NT5C3A-211ENST00000473083 POTEDQ86YR6 584 aa20.63■□□□□ 0.89
NT5C3A-211ENST00000473083 MSH5O43196 834 aa20.35■□□□□ 0.85
NT5C3A-211ENST00000473083 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
NT5C3A-211ENST00000473083 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
NT5C3A-211ENST00000473083 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
NT5C3A-211ENST00000473083 ADRA2BP18089 450 aa19.75■□□□□ 0.75
NT5C3A-211ENST00000473083 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
NT5C3A-211ENST00000473083 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
NT5C3A-211ENST00000473083 SCAF1Q9H7N4 1312 aaKnown RBP18.05■□□□□ 0.48
NT5C3A-211ENST00000473083 CACNB1Q02641 598 aaPredicted RBP17.71■□□□□ 0.43
NT5C3A-211ENST00000473083 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
NT5C3A-211ENST00000473083 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
NT5C3A-211ENST00000473083 PPP4R3CPQ6ZMV5 832 aa17.43■□□□□ 0.38
NT5C3A-211ENST00000473083 RNF39Q9H2S5 420 aa17.34■□□□□ 0.37
NT5C3A-211ENST00000473083 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
NT5C3A-211ENST00000473083 RNF216Q9NWF9 866 aaPredicted RBP17.16■□□□□ 0.34
NT5C3A-211ENST00000473083 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
NT5C3A-211ENST00000473083 DNAJC5BQ9UF47 199 aa16.94■□□□□ 0.3
NT5C3A-211ENST00000473083 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
NT5C3A-211ENST00000473083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.54■□□□□ 0.24
NT5C3A-211ENST00000473083 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
NT5C3A-211ENST00000473083 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
NT5C3A-211ENST00000473083 DSG3P32926 999 aa16.1■□□□□ 0.17
NT5C3A-211ENST00000473083 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
NT5C3A-211ENST00000473083 POTEHQ6S545 545 aa16.07■□□□□ 0.16
NT5C3A-211ENST00000473083 CAPN15O75808 1086 aa16.04■□□□□ 0.16
NT5C3A-211ENST00000473083 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
NT5C3A-211ENST00000473083 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
NT5C3A-211ENST00000473083 KCNA4P22459 653 aa15.67■□□□□ 0.1
NT5C3A-211ENST00000473083 APLP2Q06481 763 aa15.66■□□□□ 0.1
NT5C3A-211ENST00000473083 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
NT5C3A-211ENST00000473083 ABCB7O75027 752 aa15.63■□□□□ 0.09
NT5C3A-211ENST00000473083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
NT5C3A-211ENST00000473083 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
NT5C3A-211ENST00000473083 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
NT5C3A-211ENST00000473083 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
NT5C3A-211ENST00000473083 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
NT5C3A-211ENST00000473083 POLA2Q14181 598 aa15.17■□□□□ 0.02
NT5C3A-211ENST00000473083 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
NT5C3A-211ENST00000473083 AKT1S1Q96B36 256 aa14.92□□□□□ -0.02
NT5C3A-211ENST00000473083 SP7Q8TDD2 431 aaPredicted RBP14.86□□□□□ -0.03
NT5C3A-211ENST00000473083 ATF5Q9Y2D1 282 aaPredicted RBP14.86□□□□□ -0.03
NT5C3A-211ENST00000473083 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
NT5C3A-211ENST00000473083 REM2Q8IYK8 340 aaPredicted RBP14.77□□□□□ -0.05
NT5C3A-211ENST00000473083 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
NT5C3A-211ENST00000473083 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
NT5C3A-211ENST00000473083 OSCARQ8IYS5 282 aa14.7□□□□□ -0.06
NT5C3A-211ENST00000473083 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
NT5C3A-211ENST00000473083 PITPNM1O00562 1244 aa14.61□□□□□ -0.07
NT5C3A-211ENST00000473083 FXR2P51116 673 aaKnown RBP eCLIP14.61□□□□□ -0.07
NT5C3A-211ENST00000473083 HAX1O00165 279 aa14.56□□□□□ -0.08
NT5C3A-211ENST00000473083 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.09
NT5C3A-211ENST00000473083 ZBTB22O15209 634 aa14.41□□□□□ -0.1
NT5C3A-211ENST00000473083 EVX2Q03828 476 aa14.4□□□□□ -0.1
NT5C3A-211ENST00000473083 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
NT5C3A-211ENST00000473083 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
NT5C3A-211ENST00000473083 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
NT5C3A-211ENST00000473083 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
NT5C3A-211ENST00000473083 FBLN2P98095 1184 aa14.26□□□□□ -0.13
NT5C3A-211ENST00000473083 PRKAR2AP13861 404 aaKnown RBP14.23□□□□□ -0.13
NT5C3A-211ENST00000473083 SPDYE1Q8NFV5 336 aaPredicted RBP14.19□□□□□ -0.14
NT5C3A-211ENST00000473083 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
NT5C3A-211ENST00000473083 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
NT5C3A-211ENST00000473083 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
NT5C3A-211ENST00000473083 SSUH2Q9Y2M2 353 aa14.13□□□□□ -0.15
NT5C3A-211ENST00000473083 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
NT5C3A-211ENST00000473083 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
NT5C3A-211ENST00000473083 GABBR2O75899 941 aa14.04□□□□□ -0.16
NT5C3A-211ENST00000473083 CHADLQ6NUI6 762 aa13.98□□□□□ -0.17
NT5C3A-211ENST00000473083 LHX8Q68G74 356 aa13.93□□□□□ -0.18
NT5C3A-211ENST00000473083 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
NT5C3A-211ENST00000473083 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
NT5C3A-211ENST00000473083 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
NT5C3A-211ENST00000473083 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
NT5C3A-211ENST00000473083 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
NT5C3A-211ENST00000473083 CLCN6P51797 869 aa13.68□□□□□ -0.22
NT5C3A-211ENST00000473083 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
NT5C3A-211ENST00000473083 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
NT5C3A-211ENST00000473083 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
NT5C3A-211ENST00000473083 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
NT5C3A-211ENST00000473083 STAG3Q9UJ98 1225 aa13.41□□□□□ -0.26
NT5C3A-211ENST00000473083 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
NT5C3A-211ENST00000473083 PLSCR2Q9NRY7 297 aa13.34□□□□□ -0.27
NT5C3A-211ENST00000473083 OTUD5Q96G74 571 aa13.32□□□□□ -0.28
NT5C3A-211ENST00000473083 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
NT5C3A-211ENST00000473083 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
NT5C3A-211ENST00000473083 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
NT5C3A-211ENST00000473083 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
NT5C3A-211ENST00000473083 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
NT5C3A-211ENST00000473083 PELP1Q8IZL8 1130 aaKnown RBP13.19□□□□□ -0.3
NT5C3A-211ENST00000473083 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
NT5C3A-211ENST00000473083 POTEMA6NI47 508 aa13.13□□□□□ -0.31
NT5C3A-211ENST00000473083 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
NT5C3A-211ENST00000473083 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.32
NT5C3A-211ENST00000473083 POTEGQ6S5H5 508 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms