RNA–Protein interactions for RNA: ENST00000473041.1

RUNX2-206, Transcript of runt related transcription factor 2, humanhuman

TSL 3

Gene RUNX2, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-206ENST00000473041 AEBP2Q6ZN18 517 aaPredicted RBP29.3■■■□□ 2.28
RUNX2-206ENST00000473041 CHIC1Q5VXU3 224 aa27.25■■□□□ 1.95
RUNX2-206ENST00000473041 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
RUNX2-206ENST00000473041 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
RUNX2-206ENST00000473041 FOXD1Q16676 465 aa23.43■■□□□ 1.34
RUNX2-206ENST00000473041 POTEDQ86YR6 584 aa22.65■■□□□ 1.22
RUNX2-206ENST00000473041 MSH5O43196 834 aa22.04■■□□□ 1.12
RUNX2-206ENST00000473041 PIAS4Q8N2W9 510 aaPredicted RBP21.76■■□□□ 1.07
RUNX2-206ENST00000473041 PPP6R1Q9UPN7 881 aa21.52■■□□□ 1.04
RUNX2-206ENST00000473041 ADRA2BP18089 450 aa21.43■■□□□ 1.02
RUNX2-206ENST00000473041 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
RUNX2-206ENST00000473041 MAPK8IP2Q13387 824 aaPredicted RBP19.9■□□□□ 0.78
RUNX2-206ENST00000473041 DMRT2Q9Y5R5 561 aa19.71■□□□□ 0.75
RUNX2-206ENST00000473041 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
RUNX2-206ENST00000473041 CACNB1Q02641 598 aaPredicted RBP19.41■□□□□ 0.7
RUNX2-206ENST00000473041 DCAF8L1A6NGE4 600 aa19.12■□□□□ 0.65
RUNX2-206ENST00000473041 RNF39Q9H2S5 420 aa18.8■□□□□ 0.6
RUNX2-206ENST00000473041 PPP4R3CPQ6ZMV5 832 aa18.74■□□□□ 0.59
RUNX2-206ENST00000473041 HOXD11P31277 338 aaPredicted RBP18.72■□□□□ 0.59
RUNX2-206ENST00000473041 CNKSR2Q8WXI2 1034 aa18.46■□□□□ 0.55
RUNX2-206ENST00000473041 C1QBPQ07021 282 aaKnown RBP18.44■□□□□ 0.54
RUNX2-206ENST00000473041 RNF216Q9NWF9 866 aaPredicted RBP18.42■□□□□ 0.54
RUNX2-206ENST00000473041 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
RUNX2-206ENST00000473041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.46
RUNX2-206ENST00000473041 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
RUNX2-206ENST00000473041 POTEHQ6S545 545 aa17.63■□□□□ 0.41
RUNX2-206ENST00000473041 NPM3O75607 178 aaKnown RBP17.59■□□□□ 0.41
RUNX2-206ENST00000473041 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
RUNX2-206ENST00000473041 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
RUNX2-206ENST00000473041 CAPN15O75808 1086 aa17.46■□□□□ 0.39
RUNX2-206ENST00000473041 DSG3P32926 999 aa17.44■□□□□ 0.38
RUNX2-206ENST00000473041 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.32
RUNX2-206ENST00000473041 ABCB7O75027 752 aa17.07■□□□□ 0.32
RUNX2-206ENST00000473041 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
RUNX2-206ENST00000473041 ZNF219Q9P2Y4 722 aaPredicted RBP16.86■□□□□ 0.29
RUNX2-206ENST00000473041 KCNA4P22459 653 aa16.78■□□□□ 0.28
RUNX2-206ENST00000473041 APLP2Q06481 763 aa16.77■□□□□ 0.28
RUNX2-206ENST00000473041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
RUNX2-206ENST00000473041 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
RUNX2-206ENST00000473041 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
RUNX2-206ENST00000473041 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
RUNX2-206ENST00000473041 CHRDL2Q6WN34 429 aa16.53■□□□□ 0.24
RUNX2-206ENST00000473041 POLA2Q14181 598 aa16.43■□□□□ 0.22
RUNX2-206ENST00000473041 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
RUNX2-206ENST00000473041 SP7Q8TDD2 431 aaPredicted RBP16.22■□□□□ 0.19
RUNX2-206ENST00000473041 AKT1S1Q96B36 256 aa16.08■□□□□ 0.16
RUNX2-206ENST00000473041 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
RUNX2-206ENST00000473041 PIP4P2Q8N4L2 257 aa16.03■□□□□ 0.16
RUNX2-206ENST00000473041 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
RUNX2-206ENST00000473041 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
RUNX2-206ENST00000473041 HAX1O00165 279 aa15.94■□□□□ 0.14
RUNX2-206ENST00000473041 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
RUNX2-206ENST00000473041 PITPNM1O00562 1244 aa15.86■□□□□ 0.13
RUNX2-206ENST00000473041 FXR2P51116 673 aaKnown RBP eCLIP15.78■□□□□ 0.12
RUNX2-206ENST00000473041 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
RUNX2-206ENST00000473041 EVX2Q03828 476 aa15.74■□□□□ 0.11
RUNX2-206ENST00000473041 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
RUNX2-206ENST00000473041 PRKAR2AP13861 404 aaKnown RBP15.46■□□□□ 0.07
RUNX2-206ENST00000473041 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
RUNX2-206ENST00000473041 ZBTB22O15209 634 aa15.43■□□□□ 0.06
RUNX2-206ENST00000473041 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
RUNX2-206ENST00000473041 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
RUNX2-206ENST00000473041 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
RUNX2-206ENST00000473041 FBLN2P98095 1184 aa15.33■□□□□ 0.04
RUNX2-206ENST00000473041 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
RUNX2-206ENST00000473041 SPDYE1Q8NFV5 336 aaPredicted RBP15.3■□□□□ 0.04
RUNX2-206ENST00000473041 GABBR2O75899 941 aa15.28■□□□□ 0.04
RUNX2-206ENST00000473041 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
RUNX2-206ENST00000473041 LHX8Q68G74 356 aa15.23■□□□□ 0.03
RUNX2-206ENST00000473041 ATXN8OSP0DMR3 200 aa15.22■□□□□ 0.03
RUNX2-206ENST00000473041 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
RUNX2-206ENST00000473041 ZNF692Q9BU19 519 aaPredicted RBP15.21■□□□□ 0.03
RUNX2-206ENST00000473041 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
RUNX2-206ENST00000473041 PRR29P0C7W0 189 aa15.02■□□□□ -0
RUNX2-206ENST00000473041 POTEIP0CG38 1075 aa14.98□□□□□ -0.01
RUNX2-206ENST00000473041 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
RUNX2-206ENST00000473041 CD44P16070 742 aaKnown RBP14.92□□□□□ -0.02
RUNX2-206ENST00000473041 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
RUNX2-206ENST00000473041 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
RUNX2-206ENST00000473041 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
RUNX2-206ENST00000473041 DCBLD2Q96PD2 775 aa14.74□□□□□ -0.05
RUNX2-206ENST00000473041 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
RUNX2-206ENST00000473041 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
RUNX2-206ENST00000473041 CLCN6P51797 869 aa14.61□□□□□ -0.07
RUNX2-206ENST00000473041 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
RUNX2-206ENST00000473041 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
RUNX2-206ENST00000473041 OTUD5Q96G74 571 aa14.52□□□□□ -0.09
RUNX2-206ENST00000473041 CREBZFQ9NS37 354 aa14.51□□□□□ -0.09
RUNX2-206ENST00000473041 POTEB2H3BUK9 544 aa14.5□□□□□ -0.09
RUNX2-206ENST00000473041 PHF12Q96QT6 1004 aa14.42□□□□□ -0.1
RUNX2-206ENST00000473041 POTEMA6NI47 508 aa14.39□□□□□ -0.11
RUNX2-206ENST00000473041 PELP1Q8IZL8 1130 aaKnown RBP14.35□□□□□ -0.11
RUNX2-206ENST00000473041 POTEGQ6S5H5 508 aa14.34□□□□□ -0.11
RUNX2-206ENST00000473041 PAK3O75914 559 aaPredicted RBP14.31□□□□□ -0.12
RUNX2-206ENST00000473041 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
RUNX2-206ENST00000473041 METRNQ9UJH8 293 aa14.19□□□□□ -0.14
RUNX2-206ENST00000473041 POTEJP0CG39 1038 aa14.18□□□□□ -0.14
RUNX2-206ENST00000473041 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
RUNX2-206ENST00000473041 MS4A3Q96HJ5 214 aa14.17□□□□□ -0.14
RUNX2-206ENST00000473041 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms