RNA–Protein interactions for RNA: ENST00000472780.1

NR1D2-204, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

TSL 2

Gene NR1D2, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-204ENST00000472780 AEBP2Q6ZN18 517 aaPredicted RBP14.36□□□□□ -0.11
NR1D2-204ENST00000472780 CHIC1Q5VXU3 224 aa13.74□□□□□ -0.21
NR1D2-204ENST00000472780 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
NR1D2-204ENST00000472780 PHF23Q9BUL5 403 aaPredicted RBP12.13□□□□□ -0.47
NR1D2-204ENST00000472780 FOXD1Q16676 465 aa11.47□□□□□ -0.57
NR1D2-204ENST00000472780 PLPPR3Q6T4P5 718 aa11.07□□□□□ -0.64
NR1D2-204ENST00000472780 MSH5O43196 834 aa10.83□□□□□ -0.68
NR1D2-204ENST00000472780 POTEDQ86YR6 584 aa10.8□□□□□ -0.68
NR1D2-204ENST00000472780 PPP6R1Q9UPN7 881 aa10.76□□□□□ -0.69
NR1D2-204ENST00000472780 ADRA2BP18089 450 aa10.72□□□□□ -0.69
NR1D2-204ENST00000472780 PIAS4Q8N2W9 510 aaPredicted RBP10.7□□□□□ -0.7
NR1D2-204ENST00000472780 MAPK8IP2Q13387 824 aaPredicted RBP9.78□□□□□ -0.84
NR1D2-204ENST00000472780 PPP4R3CPQ6ZMV5 832 aa9.78□□□□□ -0.84
NR1D2-204ENST00000472780 DMRT2Q9Y5R5 561 aa9.73□□□□□ -0.85
NR1D2-204ENST00000472780 SCAF1Q9H7N4 1312 aaKnown RBP9.73□□□□□ -0.85
NR1D2-204ENST00000472780 CNKSR2Q8WXI2 1034 aa9.5□□□□□ -0.89
NR1D2-204ENST00000472780 KCNA4P22459 653 aa9.45□□□□□ -0.9
NR1D2-204ENST00000472780 NCBP3Q53F19 620 aaKnown RBP9.42□□□□□ -0.9
NR1D2-204ENST00000472780 CACNB1Q02641 598 aaPredicted RBP9.39□□□□□ -0.91
NR1D2-204ENST00000472780 NPM3O75607 178 aaKnown RBP9.36□□□□□ -0.91
NR1D2-204ENST00000472780 HOXD11P31277 338 aaPredicted RBP9.36□□□□□ -0.91
NR1D2-204ENST00000472780 DCAF8L1A6NGE4 600 aa9.35□□□□□ -0.91
NR1D2-204ENST00000472780 RNF216Q9NWF9 866 aaPredicted RBP9.35□□□□□ -0.91
NR1D2-204ENST00000472780 RNF39Q9H2S5 420 aa9.21□□□□□ -0.94
NR1D2-204ENST00000472780 C1QBPQ07021 282 aaKnown RBP9.09□□□□□ -0.95
NR1D2-204ENST00000472780 DNAJC5BQ9UF47 199 aa9.08□□□□□ -0.96
NR1D2-204ENST00000472780 SLC4A1APQ9BWU0 796 aaKnown RBP8.93□□□□□ -0.98
NR1D2-204ENST00000472780 SLC4A2P04920 1241 aa8.89□□□□□ -0.99
NR1D2-204ENST00000472780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.89□□□□□ -0.99
NR1D2-204ENST00000472780 U3KPZ7 1027 aaPredicted RBP8.77□□□□□ -1.01
NR1D2-204ENST00000472780 ZBTB22O15209 634 aa8.72□□□□□ -1.01
NR1D2-204ENST00000472780 FOXD4L1Q9NU39 408 aa8.67□□□□□ -1.02
NR1D2-204ENST00000472780 MYCNP04198 464 aaPredicted RBP8.61□□□□□ -1.03
NR1D2-204ENST00000472780 CAPN15O75808 1086 aa8.6□□□□□ -1.03
NR1D2-204ENST00000472780 SPINK5Q9NQ38 1064 aaPredicted RBP8.58□□□□□ -1.04
NR1D2-204ENST00000472780 DSG3P32926 999 aa8.57□□□□□ -1.04
NR1D2-204ENST00000472780 CSRNP3Q8WYN3 585 aa8.56□□□□□ -1.04
NR1D2-204ENST00000472780 EHMT2Q96KQ7 1210 aa8.56□□□□□ -1.04
NR1D2-204ENST00000472780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.53□□□□□ -1.04
NR1D2-204ENST00000472780 HNRNPUL2Q1KMD3 747 aaKnown RBP8.53□□□□□ -1.04
NR1D2-204ENST00000472780 SAMD1Q6SPF0 538 aaPredicted RBP8.51□□□□□ -1.05
NR1D2-204ENST00000472780 APLP2Q06481 763 aa8.47□□□□□ -1.05
NR1D2-204ENST00000472780 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
NR1D2-204ENST00000472780 TRHP20396 242 aaPredicted RBP8.45□□□□□ -1.06
NR1D2-204ENST00000472780 POTEHQ6S545 545 aa8.45□□□□□ -1.06
NR1D2-204ENST00000472780 ZNF219Q9P2Y4 722 aaPredicted RBP8.41□□□□□ -1.06
NR1D2-204ENST00000472780 ATXN8OSP0DMR3 200 aa8.37□□□□□ -1.07
NR1D2-204ENST00000472780 ABCB7O75027 752 aa8.36□□□□□ -1.07
NR1D2-204ENST00000472780 POLA2Q14181 598 aa8.3□□□□□ -1.08
NR1D2-204ENST00000472780 RBM42Q9BTD8 480 aaKnown RBP8.22□□□□□ -1.09
NR1D2-204ENST00000472780 MKRN4PQ13434 485 aaPredicted RBP8.08□□□□□ -1.12
NR1D2-204ENST00000472780 CHRDL2Q6WN34 429 aa8.07□□□□□ -1.12
NR1D2-204ENST00000472780 ZBTB12Q9Y330 459 aaPredicted RBP8.07□□□□□ -1.12
NR1D2-204ENST00000472780 FBLN2P98095 1184 aa8.01□□□□□ -1.13
NR1D2-204ENST00000472780 OSCARQ8IYS5 282 aa8.01□□□□□ -1.13
NR1D2-204ENST00000472780 AKT1S1Q96B36 256 aa7.99□□□□□ -1.13
NR1D2-204ENST00000472780 REM2Q8IYK8 340 aaPredicted RBP7.89□□□□□ -1.15
NR1D2-204ENST00000472780 SPDYE2BA6NHP3 402 aa7.88□□□□□ -1.15
NR1D2-204ENST00000472780 SPDYE6P0CI01 402 aa7.88□□□□□ -1.15
NR1D2-204ENST00000472780 SPDYE2Q495Y8 402 aa7.88□□□□□ -1.15
NR1D2-204ENST00000472780 SP7Q8TDD2 431 aaPredicted RBP7.85□□□□□ -1.15
NR1D2-204ENST00000472780 ZNF692Q9BU19 519 aaPredicted RBP7.85□□□□□ -1.15
NR1D2-204ENST00000472780 PIP4P2Q8N4L2 257 aa7.84□□□□□ -1.15
NR1D2-204ENST00000472780 SSUH2Q9Y2M2 353 aa7.84□□□□□ -1.15
NR1D2-204ENST00000472780 PITPNM1O00562 1244 aa7.8□□□□□ -1.16
NR1D2-204ENST00000472780 SPDYE4A6NLX3 237 aa7.79□□□□□ -1.16
NR1D2-204ENST00000472780 FXR2P51116 673 aaKnown RBP eCLIP7.78□□□□□ -1.16
NR1D2-204ENST00000472780 HAX1O00165 279 aa7.76□□□□□ -1.17
NR1D2-204ENST00000472780 PABPN1Q86U42 306 aaKnown RBP eCLIP7.75□□□□□ -1.17
NR1D2-204ENST00000472780 FKBP8Q14318 412 aa7.7□□□□□ -1.18
NR1D2-204ENST00000472780 PROM2Q8N271 834 aa7.67□□□□□ -1.18
NR1D2-204ENST00000472780 SPDYE1Q8NFV5 336 aaPredicted RBP7.67□□□□□ -1.18
NR1D2-204ENST00000472780 CLEC11AQ9Y240 323 aa7.67□□□□□ -1.18
NR1D2-204ENST00000472780 PRKAR2AP13861 404 aaKnown RBP7.61□□□□□ -1.19
NR1D2-204ENST00000472780 EVX2Q03828 476 aa7.61□□□□□ -1.19
NR1D2-204ENST00000472780 PRR29P0C7W0 189 aa7.57□□□□□ -1.2
NR1D2-204ENST00000472780 STAG3Q9UJ98 1225 aa7.55□□□□□ -1.2
NR1D2-204ENST00000472780 C19orf67A6NJJ6 358 aa7.54□□□□□ -1.2
NR1D2-204ENST00000472780 CHADLQ6NUI6 762 aa7.52□□□□□ -1.21
NR1D2-204ENST00000472780 CREBZFQ9NS37 354 aa7.49□□□□□ -1.21
NR1D2-204ENST00000472780 GABBR2O75899 941 aa7.46□□□□□ -1.22
NR1D2-204ENST00000472780 MNX1P50219 401 aaPredicted RBP7.42□□□□□ -1.22
NR1D2-204ENST00000472780 FARP1Q9Y4F1 1045 aaPredicted RBP7.42□□□□□ -1.22
NR1D2-204ENST00000472780 MIER1Q8N108 512 aa7.41□□□□□ -1.22
NR1D2-204ENST00000472780 FBXO3Q9UK99 471 aa7.4□□□□□ -1.22
NR1D2-204ENST00000472780 LHX8Q68G74 356 aa7.36□□□□□ -1.23
NR1D2-204ENST00000472780 CD44P16070 742 aaKnown RBP7.35□□□□□ -1.23
NR1D2-204ENST00000472780 VASPP50552 380 aaPredicted RBP7.35□□□□□ -1.23
NR1D2-204ENST00000472780 CLCN6P51797 869 aa7.35□□□□□ -1.23
NR1D2-204ENST00000472780 PLCD3Q8N3E9 789 aa7.35□□□□□ -1.23
NR1D2-204ENST00000472780 PLEKHG5O94827 1062 aa7.29□□□□□ -1.24
NR1D2-204ENST00000472780 NPM1P06748 294 aaKnown RBP eCLIP7.29□□□□□ -1.24
NR1D2-204ENST00000472780 IFNLR1Q8IU57 520 aaPredicted RBP7.28□□□□□ -1.24
NR1D2-204ENST00000472780 POTEIP0CG38 1075 aa7.27□□□□□ -1.25
NR1D2-204ENST00000472780 NUBP1P53384 320 aa7.25□□□□□ -1.25
NR1D2-204ENST00000472780 RASEFQ8IZ41 740 aa7.25□□□□□ -1.25
NR1D2-204ENST00000472780 DCBLD2Q96PD2 775 aa7.25□□□□□ -1.25
NR1D2-204ENST00000472780 ZNF579Q8NAF0 562 aaKnown RBP7.24□□□□□ -1.25
NR1D2-204ENST00000472780 KLHL34Q8N239 644 aa7.23□□□□□ -1.25
NR1D2-204ENST00000472780 ZBTB47Q9UFB7 747 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms