RNA–Protein interactions for RNA: ENST00000472612.5

PHTF1-208, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 943 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-208ENST00000472612 AEBP2Q6ZN18 517 aaPredicted RBP34.19■■■■□ 3.06
PHTF1-208ENST00000472612 CHIC1Q5VXU3 224 aa32.32■■■□□ 2.76
PHTF1-208ENST00000472612 SENP3Q9H4L4 574 aaPredicted RBP29.24■■■□□ 2.27
PHTF1-208ENST00000472612 PHF23Q9BUL5 403 aaPredicted RBP28.81■■■□□ 2.2
PHTF1-208ENST00000472612 FOXD1Q16676 465 aa27.25■■□□□ 1.95
PHTF1-208ENST00000472612 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
PHTF1-208ENST00000472612 MSH5O43196 834 aa25.6■■□□□ 1.69
PHTF1-208ENST00000472612 PIAS4Q8N2W9 510 aaPredicted RBP25.43■■□□□ 1.66
PHTF1-208ENST00000472612 PPP6R1Q9UPN7 881 aa25.32■■□□□ 1.64
PHTF1-208ENST00000472612 POTEDQ86YR6 584 aa25.27■■□□□ 1.64
PHTF1-208ENST00000472612 ADRA2BP18089 450 aa25.23■■□□□ 1.63
PHTF1-208ENST00000472612 MAPK8IP2Q13387 824 aaPredicted RBP23.23■■□□□ 1.31
PHTF1-208ENST00000472612 DMRT2Q9Y5R5 561 aa23.15■■□□□ 1.3
PHTF1-208ENST00000472612 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.3
PHTF1-208ENST00000472612 PPP4R3CPQ6ZMV5 832 aa22.54■■□□□ 1.2
PHTF1-208ENST00000472612 HOXD11P31277 338 aaPredicted RBP22.22■■□□□ 1.15
PHTF1-208ENST00000472612 DCAF8L1A6NGE4 600 aa22.21■■□□□ 1.15
PHTF1-208ENST00000472612 CNKSR2Q8WXI2 1034 aa22.18■■□□□ 1.14
PHTF1-208ENST00000472612 CACNB1Q02641 598 aaPredicted RBP22.07■■□□□ 1.12
PHTF1-208ENST00000472612 RNF216Q9NWF9 866 aaPredicted RBP22.02■■□□□ 1.12
PHTF1-208ENST00000472612 RNF39Q9H2S5 420 aa21.81■■□□□ 1.08
PHTF1-208ENST00000472612 NCBP3Q53F19 620 aaKnown RBP21.64■■□□□ 1.05
PHTF1-208ENST00000472612 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
PHTF1-208ENST00000472612 C1QBPQ07021 282 aaKnown RBP21.5■■□□□ 1.03
PHTF1-208ENST00000472612 NPM3O75607 178 aaKnown RBP21.3■■□□□ 1
PHTF1-208ENST00000472612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.18■□□□□ 0.98
PHTF1-208ENST00000472612 KCNA4P22459 653 aa20.72■□□□□ 0.91
PHTF1-208ENST00000472612 U3KPZ7 1027 aaPredicted RBP20.7■□□□□ 0.9
PHTF1-208ENST00000472612 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.86
PHTF1-208ENST00000472612 CAPN15O75808 1086 aa20.44■□□□□ 0.86
PHTF1-208ENST00000472612 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
PHTF1-208ENST00000472612 DSG3P32926 999 aa20.37■□□□□ 0.85
PHTF1-208ENST00000472612 APLP2Q06481 763 aa20.15■□□□□ 0.82
PHTF1-208ENST00000472612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.09■□□□□ 0.81
PHTF1-208ENST00000472612 HNRNPUL2Q1KMD3 747 aaKnown RBP20.09■□□□□ 0.81
PHTF1-208ENST00000472612 TRHP20396 242 aaPredicted RBP20.07■□□□□ 0.8
PHTF1-208ENST00000472612 ZNF219Q9P2Y4 722 aaPredicted RBP20.04■□□□□ 0.8
PHTF1-208ENST00000472612 SAMD1Q6SPF0 538 aaPredicted RBP19.96■□□□□ 0.79
PHTF1-208ENST00000472612 ABCB7O75027 752 aa19.94■□□□□ 0.78
PHTF1-208ENST00000472612 POTEHQ6S545 545 aa19.78■□□□□ 0.76
PHTF1-208ENST00000472612 MYCNP04198 464 aaPredicted RBP19.73■□□□□ 0.75
PHTF1-208ENST00000472612 SLC4A1APQ9BWU0 796 aaKnown RBP19.54■□□□□ 0.72
PHTF1-208ENST00000472612 POLA2Q14181 598 aa19.49■□□□□ 0.71
PHTF1-208ENST00000472612 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
PHTF1-208ENST00000472612 FOXD4L1Q9NU39 408 aa19.42■□□□□ 0.7
PHTF1-208ENST00000472612 ATF5Q9Y2D1 282 aaPredicted RBP19.25■□□□□ 0.67
PHTF1-208ENST00000472612 ZBTB12Q9Y330 459 aaPredicted RBP19.11■□□□□ 0.65
PHTF1-208ENST00000472612 CHRDL2Q6WN34 429 aa19.08■□□□□ 0.64
PHTF1-208ENST00000472612 ZBTB22O15209 634 aa19.03■□□□□ 0.64
PHTF1-208ENST00000472612 AKT1S1Q96B36 256 aa18.97■□□□□ 0.63
PHTF1-208ENST00000472612 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
PHTF1-208ENST00000472612 ATXN8OSP0DMR3 200 aa18.85■□□□□ 0.61
PHTF1-208ENST00000472612 REM2Q8IYK8 340 aaPredicted RBP18.77■□□□□ 0.6
PHTF1-208ENST00000472612 PIP4P2Q8N4L2 257 aa18.59■□□□□ 0.57
PHTF1-208ENST00000472612 PITPNM1O00562 1244 aa18.57■□□□□ 0.56
PHTF1-208ENST00000472612 FBLN2P98095 1184 aa18.55■□□□□ 0.56
PHTF1-208ENST00000472612 SPDYE2BA6NHP3 402 aa18.49■□□□□ 0.55
PHTF1-208ENST00000472612 SPDYE6P0CI01 402 aa18.49■□□□□ 0.55
PHTF1-208ENST00000472612 SPDYE2Q495Y8 402 aa18.49■□□□□ 0.55
PHTF1-208ENST00000472612 SP7Q8TDD2 431 aaPredicted RBP18.46■□□□□ 0.55
PHTF1-208ENST00000472612 FXR2P51116 673 aaKnown RBP eCLIP18.45■□□□□ 0.54
PHTF1-208ENST00000472612 MKRN4PQ13434 485 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-208ENST00000472612 HAX1O00165 279 aa18.31■□□□□ 0.52
PHTF1-208ENST00000472612 ZNF692Q9BU19 519 aaPredicted RBP18.24■□□□□ 0.51
PHTF1-208ENST00000472612 SPDYE1Q8NFV5 336 aaPredicted RBP18.22■□□□□ 0.51
PHTF1-208ENST00000472612 SSUH2Q9Y2M2 353 aa18.21■□□□□ 0.51
PHTF1-208ENST00000472612 CLEC11AQ9Y240 323 aa18.19■□□□□ 0.5
PHTF1-208ENST00000472612 PRKAR2AP13861 404 aaKnown RBP18.1■□□□□ 0.49
PHTF1-208ENST00000472612 EVX2Q03828 476 aa18.04■□□□□ 0.48
PHTF1-208ENST00000472612 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
PHTF1-208ENST00000472612 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
PHTF1-208ENST00000472612 C19orf67A6NJJ6 358 aa17.87■□□□□ 0.45
PHTF1-208ENST00000472612 PRR29P0C7W0 189 aa17.87■□□□□ 0.45
PHTF1-208ENST00000472612 CHADLQ6NUI6 762 aa17.84■□□□□ 0.45
PHTF1-208ENST00000472612 EHMT2Q96KQ7 1210 aa17.66■□□□□ 0.42
PHTF1-208ENST00000472612 GABBR2O75899 941 aa17.65■□□□□ 0.42
PHTF1-208ENST00000472612 FARP1Q9Y4F1 1045 aaPredicted RBP17.57■□□□□ 0.4
PHTF1-208ENST00000472612 CD44P16070 742 aaKnown RBP17.51■□□□□ 0.39
PHTF1-208ENST00000472612 STAG3Q9UJ98 1225 aa17.45■□□□□ 0.38
PHTF1-208ENST00000472612 SPDYE4A6NLX3 237 aa17.42■□□□□ 0.38
PHTF1-208ENST00000472612 CLCN6P51797 869 aa17.36■□□□□ 0.37
PHTF1-208ENST00000472612 CREBZFQ9NS37 354 aa17.36■□□□□ 0.37
PHTF1-208ENST00000472612 LHX8Q68G74 356 aa17.31■□□□□ 0.36
PHTF1-208ENST00000472612 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
PHTF1-208ENST00000472612 ZNF579Q8NAF0 562 aaKnown RBP17.24■□□□□ 0.35
PHTF1-208ENST00000472612 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
PHTF1-208ENST00000472612 DCBLD2Q96PD2 775 aa17.16■□□□□ 0.34
PHTF1-208ENST00000472612 PAK3O75914 559 aaPredicted RBP17.09■□□□□ 0.33
PHTF1-208ENST00000472612 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
PHTF1-208ENST00000472612 GALR2O43603 387 aaPredicted RBP17.03■□□□□ 0.32
PHTF1-208ENST00000472612 MNX1P50219 401 aaPredicted RBP17.03■□□□□ 0.32
PHTF1-208ENST00000472612 PROM2Q8N271 834 aa16.96■□□□□ 0.31
PHTF1-208ENST00000472612 PHF12Q96QT6 1004 aa16.96■□□□□ 0.31
PHTF1-208ENST00000472612 MS4A3Q96HJ5 214 aa16.74■□□□□ 0.27
PHTF1-208ENST00000472612 TSPYL2Q9H2G4 693 aaPredicted RBP16.73■□□□□ 0.27
PHTF1-208ENST00000472612 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
PHTF1-208ENST00000472612 POTEB2H3BUK9 544 aa16.69■□□□□ 0.26
PHTF1-208ENST00000472612 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
PHTF1-208ENST00000472612 ASTLQ6HA08 431 aaPredicted RBP16.67■□□□□ 0.26
PHTF1-208ENST00000472612 OTUD5Q96G74 571 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms