RNA–Protein interactions for RNA: ENST00000472265.1

KDM4A-203, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-203ENST00000472265 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
KDM4A-203ENST00000472265 AEBP2Q6ZN18 517 aaPredicted RBP17.58■□□□□ 0.4
KDM4A-203ENST00000472265 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
KDM4A-203ENST00000472265 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
KDM4A-203ENST00000472265 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
KDM4A-203ENST00000472265 FOXD1Q16676 465 aa13.73□□□□□ -0.21
KDM4A-203ENST00000472265 ADRA2BP18089 450 aa13.57□□□□□ -0.24
KDM4A-203ENST00000472265 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
KDM4A-203ENST00000472265 PIAS4Q8N2W9 510 aaPredicted RBP13.05□□□□□ -0.32
KDM4A-203ENST00000472265 KCNA4P22459 653 aa12.98□□□□□ -0.33
KDM4A-203ENST00000472265 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
KDM4A-203ENST00000472265 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
KDM4A-203ENST00000472265 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
KDM4A-203ENST00000472265 MSH5O43196 834 aa12.5□□□□□ -0.41
KDM4A-203ENST00000472265 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
KDM4A-203ENST00000472265 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
KDM4A-203ENST00000472265 NPM3O75607 178 aaKnown RBP12.4□□□□□ -0.42
KDM4A-203ENST00000472265 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
KDM4A-203ENST00000472265 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
KDM4A-203ENST00000472265 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
KDM4A-203ENST00000472265 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
KDM4A-203ENST00000472265 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
KDM4A-203ENST00000472265 ZBTB22O15209 634 aa11.93□□□□□ -0.5
KDM4A-203ENST00000472265 DMRT2Q9Y5R5 561 aa11.92□□□□□ -0.5
KDM4A-203ENST00000472265 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
KDM4A-203ENST00000472265 FOXD4L1Q9NU39 408 aa11.82□□□□□ -0.52
KDM4A-203ENST00000472265 SLC4A2P04920 1241 aa11.61□□□□□ -0.55
KDM4A-203ENST00000472265 MYCNP04198 464 aaPredicted RBP11.44□□□□□ -0.58
KDM4A-203ENST00000472265 DCAF8L1A6NGE4 600 aa11.39□□□□□ -0.59
KDM4A-203ENST00000472265 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
KDM4A-203ENST00000472265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.29□□□□□ -0.6
KDM4A-203ENST00000472265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
KDM4A-203ENST00000472265 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
KDM4A-203ENST00000472265 U3KPZ7 1027 aaPredicted RBP11.15□□□□□ -0.62
KDM4A-203ENST00000472265 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
KDM4A-203ENST00000472265 ATF5Q9Y2D1 282 aaPredicted RBP11.11□□□□□ -0.63
KDM4A-203ENST00000472265 FKBP8Q14318 412 aa11.03□□□□□ -0.64
KDM4A-203ENST00000472265 APLP2Q06481 763 aa10.95□□□□□ -0.66
KDM4A-203ENST00000472265 ZNF219Q9P2Y4 722 aaPredicted RBP10.9□□□□□ -0.66
KDM4A-203ENST00000472265 AMER1Q5JTC6 1135 aaPredicted RBP10.79□□□□□ -0.68
KDM4A-203ENST00000472265 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.69
KDM4A-203ENST00000472265 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
KDM4A-203ENST00000472265 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
KDM4A-203ENST00000472265 SPINK5Q9NQ38 1064 aaPredicted RBP10.71□□□□□ -0.69
KDM4A-203ENST00000472265 CAPN15O75808 1086 aa10.66□□□□□ -0.7
KDM4A-203ENST00000472265 C1QBPQ07021 282 aaKnown RBP10.65□□□□□ -0.7
KDM4A-203ENST00000472265 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
KDM4A-203ENST00000472265 POLA2Q14181 598 aa10.64□□□□□ -0.71
KDM4A-203ENST00000472265 POTEDQ86YR6 584 aa10.64□□□□□ -0.71
KDM4A-203ENST00000472265 FBLN2P98095 1184 aa10.63□□□□□ -0.71
KDM4A-203ENST00000472265 SPDYE4A6NLX3 237 aa10.62□□□□□ -0.71
KDM4A-203ENST00000472265 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
KDM4A-203ENST00000472265 PROM2Q8N271 834 aa10.5□□□□□ -0.73
KDM4A-203ENST00000472265 ABCB7O75027 752 aa10.48□□□□□ -0.73
KDM4A-203ENST00000472265 ZBTB12Q9Y330 459 aaPredicted RBP10.48□□□□□ -0.73
KDM4A-203ENST00000472265 SLC24A1O60721 1099 aa10.42□□□□□ -0.74
KDM4A-203ENST00000472265 DSG3P32926 999 aa10.38□□□□□ -0.75
KDM4A-203ENST00000472265 VASPP50552 380 aaPredicted RBP10.36□□□□□ -0.75
KDM4A-203ENST00000472265 ZNF692Q9BU19 519 aaPredicted RBP10.28□□□□□ -0.76
KDM4A-203ENST00000472265 IFNLR1Q8IU57 520 aaPredicted RBP10.26□□□□□ -0.77
KDM4A-203ENST00000472265 SPDYE2BA6NHP3 402 aa10.24□□□□□ -0.77
KDM4A-203ENST00000472265 SPDYE6P0CI01 402 aa10.24□□□□□ -0.77
KDM4A-203ENST00000472265 SPDYE2Q495Y8 402 aa10.24□□□□□ -0.77
KDM4A-203ENST00000472265 OSCARQ8IYS5 282 aa10.24□□□□□ -0.77
KDM4A-203ENST00000472265 SSUH2Q9Y2M2 353 aa10.19□□□□□ -0.78
KDM4A-203ENST00000472265 CACNB1Q02641 598 aaPredicted RBP10.17□□□□□ -0.78
KDM4A-203ENST00000472265 STAG3Q9UJ98 1225 aa10.17□□□□□ -0.78
KDM4A-203ENST00000472265 PABPN1Q86U42 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
KDM4A-203ENST00000472265 KLHL34Q8N239 644 aa10.11□□□□□ -0.79
KDM4A-203ENST00000472265 PKD2Q13563 968 aa10.08□□□□□ -0.8
KDM4A-203ENST00000472265 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
KDM4A-203ENST00000472265 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
KDM4A-203ENST00000472265 MIER1Q8N108 512 aa10.04□□□□□ -0.8
KDM4A-203ENST00000472265 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
KDM4A-203ENST00000472265 PLCB2Q00722 1185 aa9.96□□□□□ -0.82
KDM4A-203ENST00000472265 PLEKHG5O94827 1062 aa9.95□□□□□ -0.82
KDM4A-203ENST00000472265 ECM2O94769 699 aaPredicted RBP9.94□□□□□ -0.82
KDM4A-203ENST00000472265 ZBTB47Q9UFB7 747 aaPredicted RBP9.92□□□□□ -0.82
KDM4A-203ENST00000472265 RBM42Q9BTD8 480 aaKnown RBP9.88□□□□□ -0.83
KDM4A-203ENST00000472265 AKT1S1Q96B36 256 aa9.85□□□□□ -0.83
KDM4A-203ENST00000472265 CIZ1Q9ULV3 898 aaPredicted RBP9.85□□□□□ -0.83
KDM4A-203ENST00000472265 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
KDM4A-203ENST00000472265 RGL2O15211 777 aa9.83□□□□□ -0.84
KDM4A-203ENST00000472265 HAP1P54257 671 aaPredicted RBP9.83□□□□□ -0.84
KDM4A-203ENST00000472265 BBXQ8WY36 941 aaPredicted RBP9.81□□□□□ -0.84
KDM4A-203ENST00000472265 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
KDM4A-203ENST00000472265 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
KDM4A-203ENST00000472265 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
KDM4A-203ENST00000472265 CLEC11AQ9Y240 323 aa9.77□□□□□ -0.85
KDM4A-203ENST00000472265 REM2Q8IYK8 340 aaPredicted RBP9.76□□□□□ -0.85
KDM4A-203ENST00000472265 PRR29P0C7W0 189 aa9.75□□□□□ -0.85
KDM4A-203ENST00000472265 GSE1Q14687 1217 aa9.74□□□□□ -0.85
KDM4A-203ENST00000472265 NUBP1P53384 320 aa9.73□□□□□ -0.85
KDM4A-203ENST00000472265 CREBZFQ9NS37 354 aa9.72□□□□□ -0.85
KDM4A-203ENST00000472265 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
KDM4A-203ENST00000472265 VSIG10Q8N0Z9 540 aa9.7□□□□□ -0.86
KDM4A-203ENST00000472265 CHGAP10645 457 aaKnown RBP9.69□□□□□ -0.86
KDM4A-203ENST00000472265 DCAF8Q5TAQ9 597 aa9.69□□□□□ -0.86
KDM4A-203ENST00000472265 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
KDM4A-203ENST00000472265 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms