RNA–Protein interactions for RNA: ENST00000472189.1

NCOR1-215, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-215ENST00000472189 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
NCOR1-215ENST00000472189 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
NCOR1-215ENST00000472189 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
NCOR1-215ENST00000472189 PHF23Q9BUL5 403 aaPredicted RBP24.85■■□□□ 1.57
NCOR1-215ENST00000472189 FOXD1Q16676 465 aa23.53■■□□□ 1.36
NCOR1-215ENST00000472189 MSH5O43196 834 aa22.21■■□□□ 1.15
NCOR1-215ENST00000472189 POTEDQ86YR6 584 aa22.11■■□□□ 1.13
NCOR1-215ENST00000472189 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
NCOR1-215ENST00000472189 PIAS4Q8N2W9 510 aaPredicted RBP21.95■■□□□ 1.1
NCOR1-215ENST00000472189 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
NCOR1-215ENST00000472189 ADRA2BP18089 450 aa21.66■■□□□ 1.06
NCOR1-215ENST00000472189 DMRT2Q9Y5R5 561 aa19.98■□□□□ 0.79
NCOR1-215ENST00000472189 MAPK8IP2Q13387 824 aaPredicted RBP19.96■□□□□ 0.79
NCOR1-215ENST00000472189 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
NCOR1-215ENST00000472189 PPP4R3CPQ6ZMV5 832 aa19.27■□□□□ 0.68
NCOR1-215ENST00000472189 CACNB1Q02641 598 aaPredicted RBP19.2■□□□□ 0.66
NCOR1-215ENST00000472189 DCAF8L1A6NGE4 600 aa19.16■□□□□ 0.66
NCOR1-215ENST00000472189 HOXD11P31277 338 aaPredicted RBP19.12■□□□□ 0.65
NCOR1-215ENST00000472189 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
NCOR1-215ENST00000472189 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
NCOR1-215ENST00000472189 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
NCOR1-215ENST00000472189 C1QBPQ07021 282 aaKnown RBP18.62■□□□□ 0.57
NCOR1-215ENST00000472189 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.56
NCOR1-215ENST00000472189 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
NCOR1-215ENST00000472189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.512e-12■■□□□ 14.1
NCOR1-215ENST00000472189 NPM3O75607 178 aaKnown RBP18.17■□□□□ 0.5
NCOR1-215ENST00000472189 U3KPZ7 1027 aaPredicted RBP17.79■□□□□ 0.44
NCOR1-215ENST00000472189 CAPN15O75808 1086 aa17.62■□□□□ 0.41
NCOR1-215ENST00000472189 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
NCOR1-215ENST00000472189 DSG3P32926 999 aa17.57■□□□□ 0.4
NCOR1-215ENST00000472189 KCNA4P22459 653 aa17.54■□□□□ 0.4
NCOR1-215ENST00000472189 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
NCOR1-215ENST00000472189 APLP2Q06481 763 aa17.37■□□□□ 0.37
NCOR1-215ENST00000472189 POTEHQ6S545 545 aa17.28■□□□□ 0.36
NCOR1-215ENST00000472189 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
NCOR1-215ENST00000472189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
NCOR1-215ENST00000472189 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
NCOR1-215ENST00000472189 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
NCOR1-215ENST00000472189 ABCB7O75027 752 aa17.15■□□□□ 0.34
NCOR1-215ENST00000472189 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
NCOR1-215ENST00000472189 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
NCOR1-215ENST00000472189 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
NCOR1-215ENST00000472189 POLA2Q14181 598 aa16.71■□□□□ 0.27
NCOR1-215ENST00000472189 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
NCOR1-215ENST00000472189 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
NCOR1-215ENST00000472189 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
NCOR1-215ENST00000472189 ZBTB12Q9Y330 459 aaPredicted RBP16.44■□□□□ 0.22
NCOR1-215ENST00000472189 ATF5Q9Y2D1 282 aaPredicted RBP16.4■□□□□ 0.22
NCOR1-215ENST00000472189 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
NCOR1-215ENST00000472189 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
NCOR1-215ENST00000472189 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
NCOR1-215ENST00000472189 ZBTB22O15209 634 aa16.1■□□□□ 0.17
NCOR1-215ENST00000472189 PIP4P2Q8N4L2 257 aa16.07■□□□□ 0.16
NCOR1-215ENST00000472189 SP7Q8TDD2 431 aaPredicted RBP16.07■□□□□ 0.16
NCOR1-215ENST00000472189 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
NCOR1-215ENST00000472189 PITPNM1O00562 1244 aa16.01■□□□□ 0.15
NCOR1-215ENST00000472189 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.144e-8■■□□□ 13.2
NCOR1-215ENST00000472189 FBLN2P98095 1184 aa15.89■□□□□ 0.13
NCOR1-215ENST00000472189 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
NCOR1-215ENST00000472189 SPDYE2BA6NHP3 402 aa15.88■□□□□ 0.13
NCOR1-215ENST00000472189 SPDYE6P0CI01 402 aa15.88■□□□□ 0.13
NCOR1-215ENST00000472189 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
NCOR1-215ENST00000472189 HAX1O00165 279 aa15.86■□□□□ 0.13
NCOR1-215ENST00000472189 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
NCOR1-215ENST00000472189 SPDYE1Q8NFV5 336 aaPredicted RBP15.68■□□□□ 0.1
NCOR1-215ENST00000472189 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
NCOR1-215ENST00000472189 CLEC11AQ9Y240 323 aa15.62■□□□□ 0.09
NCOR1-215ENST00000472189 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
NCOR1-215ENST00000472189 PRKAR2AP13861 404 aaKnown RBP15.6■□□□□ 0.09
NCOR1-215ENST00000472189 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
NCOR1-215ENST00000472189 EVX2Q03828 476 aa15.58■□□□□ 0.08
NCOR1-215ENST00000472189 C19orf67A6NJJ6 358 aa15.44■□□□□ 0.06
NCOR1-215ENST00000472189 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
NCOR1-215ENST00000472189 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
NCOR1-215ENST00000472189 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
NCOR1-215ENST00000472189 GABBR2O75899 941 aa15.26■□□□□ 0.03
NCOR1-215ENST00000472189 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
NCOR1-215ENST00000472189 CD44P16070 742 aaKnown RBP15.1■□□□□ 0.01
NCOR1-215ENST00000472189 LHX8Q68G74 356 aa15.06■□□□□ 0
NCOR1-215ENST00000472189 CLCN6P51797 869 aa15.02■□□□□ -0
NCOR1-215ENST00000472189 STAG3Q9UJ98 1225 aa14.94□□□□□ -0.02
NCOR1-215ENST00000472189 POTEIP0CG38 1075 aa14.91□□□□□ -0.02
NCOR1-215ENST00000472189 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
NCOR1-215ENST00000472189 CREBZFQ9NS37 354 aa14.86□□□□□ -0.03
NCOR1-215ENST00000472189 DCBLD2Q96PD2 775 aa14.83□□□□□ -0.04
NCOR1-215ENST00000472189 ZRANB1Q9UGI0 708 aa14.83□□□□□ -0.04
NCOR1-215ENST00000472189 SPDYE4A6NLX3 237 aa14.8□□□□□ -0.04
NCOR1-215ENST00000472189 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
NCOR1-215ENST00000472189 GALR2O43603 387 aaPredicted RBP14.66□□□□□ -0.06
NCOR1-215ENST00000472189 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
NCOR1-215ENST00000472189 PHF12Q96QT6 1004 aa14.59□□□□□ -0.07
NCOR1-215ENST00000472189 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
NCOR1-215ENST00000472189 OTUD5Q96G74 571 aa14.43□□□□□ -0.1
NCOR1-215ENST00000472189 PROM2Q8N271 834 aa14.41□□□□□ -0.1
NCOR1-215ENST00000472189 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
NCOR1-215ENST00000472189 MS4A3Q96HJ5 214 aa14.39□□□□□ -0.11
NCOR1-215ENST00000472189 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
NCOR1-215ENST00000472189 ASTLQ6HA08 431 aaPredicted RBP14.37□□□□□ -0.11
NCOR1-215ENST00000472189 ATMINO43313 823 aaPredicted RBP14.32□□□□□ -0.12
NCOR1-215ENST00000472189 SLC39A7Q92504 469 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms