RNA–Protein interactions for RNA: ENST00000471799.1

SRRD-202, Transcript of SRR1 domain containing, humanhuman

TSL 2

Gene SRRD, Length 668 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-202ENST00000471799 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
SRRD-202ENST00000471799 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
SRRD-202ENST00000471799 PHF23Q9BUL5 403 aaPredicted RBP21.83■■□□□ 1.09
SRRD-202ENST00000471799 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
SRRD-202ENST00000471799 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
SRRD-202ENST00000471799 FOXD1Q16676 465 aa19.49■□□□□ 0.71
SRRD-202ENST00000471799 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
SRRD-202ENST00000471799 ADRA2BP18089 450 aa19.08■□□□□ 0.64
SRRD-202ENST00000471799 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
SRRD-202ENST00000471799 KCNA4P22459 653 aa17.95■□□□□ 0.46
SRRD-202ENST00000471799 PPP4R3CPQ6ZMV5 832 aa17.83■□□□□ 0.44
SRRD-202ENST00000471799 MSH5O43196 834 aa17.68■□□□□ 0.42
SRRD-202ENST00000471799 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
SRRD-202ENST00000471799 NPM3O75607 178 aaKnown RBP17.27■□□□□ 0.36
SRRD-202ENST00000471799 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
SRRD-202ENST00000471799 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
SRRD-202ENST00000471799 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
SRRD-202ENST00000471799 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
SRRD-202ENST00000471799 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
SRRD-202ENST00000471799 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
SRRD-202ENST00000471799 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
SRRD-202ENST00000471799 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
SRRD-202ENST00000471799 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
SRRD-202ENST00000471799 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
SRRD-202ENST00000471799 ZBTB22O15209 634 aa16.6■□□□□ 0.25
SRRD-202ENST00000471799 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
SRRD-202ENST00000471799 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
SRRD-202ENST00000471799 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
SRRD-202ENST00000471799 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
SRRD-202ENST00000471799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.12
SRRD-202ENST00000471799 U3KPZ7 1027 aaPredicted RBP15.69■□□□□ 0.1
SRRD-202ENST00000471799 ATXN8OSP0DMR3 200 aa15.66■□□□□ 0.1
SRRD-202ENST00000471799 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
SRRD-202ENST00000471799 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
SRRD-202ENST00000471799 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
SRRD-202ENST00000471799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
SRRD-202ENST00000471799 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
SRRD-202ENST00000471799 RNF39Q9H2S5 420 aa15.28■□□□□ 0.04
SRRD-202ENST00000471799 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
SRRD-202ENST00000471799 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
SRRD-202ENST00000471799 APLP2Q06481 763 aa15.12■□□□□ 0.01
SRRD-202ENST00000471799 C1QBPQ07021 282 aaKnown RBP15.05■□□□□ -0
SRRD-202ENST00000471799 FKBP8Q14318 412 aa15.05■□□□□ -0
SRRD-202ENST00000471799 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
SRRD-202ENST00000471799 CAPN15O75808 1086 aa14.95□□□□□ -0.02
SRRD-202ENST00000471799 MKRN4PQ13434 485 aaPredicted RBP14.91□□□□□ -0.02
SRRD-202ENST00000471799 POLA2Q14181 598 aa14.86□□□□□ -0.03
SRRD-202ENST00000471799 ABCB7O75027 752 aa14.77□□□□□ -0.05
SRRD-202ENST00000471799 DSG3P32926 999 aa14.68□□□□□ -0.06
SRRD-202ENST00000471799 FBLN2P98095 1184 aa14.66□□□□□ -0.06
SRRD-202ENST00000471799 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
SRRD-202ENST00000471799 PROM2Q8N271 834 aa14.55□□□□□ -0.08
SRRD-202ENST00000471799 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
SRRD-202ENST00000471799 CACNB1Q02641 598 aaPredicted RBP14.5□□□□□ -0.09
SRRD-202ENST00000471799 RTN4Q9NQC3 1192 aaKnown RBP14.47□□□□□ -0.09
SRRD-202ENST00000471799 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
SRRD-202ENST00000471799 AMER1Q5JTC6 1135 aaPredicted RBP14.36□□□□□ -0.11
SRRD-202ENST00000471799 FBXO3Q9UK99 471 aa14.29□□□□□ -0.12
SRRD-202ENST00000471799 SSUH2Q9Y2M2 353 aa14.26□□□□□ -0.13
SRRD-202ENST00000471799 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
SRRD-202ENST00000471799 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
SRRD-202ENST00000471799 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
SRRD-202ENST00000471799 ZNF692Q9BU19 519 aaPredicted RBP14.24□□□□□ -0.13
SRRD-202ENST00000471799 VASPP50552 380 aaPredicted RBP14.2□□□□□ -0.14
SRRD-202ENST00000471799 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
SRRD-202ENST00000471799 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
SRRD-202ENST00000471799 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
SRRD-202ENST00000471799 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
SRRD-202ENST00000471799 AKT1S1Q96B36 256 aa13.82□□□□□ -0.2
SRRD-202ENST00000471799 PKD2Q13563 968 aa13.79□□□□□ -0.2
SRRD-202ENST00000471799 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
SRRD-202ENST00000471799 MIER1Q8N108 512 aa13.78□□□□□ -0.2
SRRD-202ENST00000471799 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
SRRD-202ENST00000471799 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
SRRD-202ENST00000471799 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
SRRD-202ENST00000471799 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
SRRD-202ENST00000471799 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
SRRD-202ENST00000471799 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
SRRD-202ENST00000471799 PITPNM1O00562 1244 aa13.6□□□□□ -0.23
SRRD-202ENST00000471799 CREBZFQ9NS37 354 aa13.59□□□□□ -0.23
SRRD-202ENST00000471799 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
SRRD-202ENST00000471799 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
SRRD-202ENST00000471799 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
SRRD-202ENST00000471799 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
SRRD-202ENST00000471799 ECM2O94769 699 aaPredicted RBP13.53□□□□□ -0.24
SRRD-202ENST00000471799 NUBP1P53384 320 aa13.5□□□□□ -0.25
SRRD-202ENST00000471799 RGL2O15211 777 aa13.47□□□□□ -0.25
SRRD-202ENST00000471799 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
SRRD-202ENST00000471799 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
SRRD-202ENST00000471799 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
SRRD-202ENST00000471799 CHADLQ6NUI6 762 aa13.36□□□□□ -0.27
SRRD-202ENST00000471799 RASEFQ8IZ41 740 aa13.36□□□□□ -0.27
SRRD-202ENST00000471799 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
SRRD-202ENST00000471799 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
SRRD-202ENST00000471799 GSE1Q14687 1217 aa13.32□□□□□ -0.28
SRRD-202ENST00000471799 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
SRRD-202ENST00000471799 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
SRRD-202ENST00000471799 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
SRRD-202ENST00000471799 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
SRRD-202ENST00000471799 FARP1Q9Y4F1 1045 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms