RNA–Protein interactions for RNA: ENST00000471699.1

CCDC30-207, Transcript of coiled-coil domain containing 30, humanhuman

TSL 3

Gene CCDC30, Length 391 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-207ENST00000471699 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
CCDC30-207ENST00000471699 CHIC1Q5VXU3 224 aa27.4■■□□□ 1.98
CCDC30-207ENST00000471699 SENP3Q9H4L4 574 aaPredicted RBP24.17■■□□□ 1.46
CCDC30-207ENST00000471699 PHF23Q9BUL5 403 aaPredicted RBP24.11■■□□□ 1.45
CCDC30-207ENST00000471699 FOXD1Q16676 465 aa22.55■■□□□ 1.2
CCDC30-207ENST00000471699 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
CCDC30-207ENST00000471699 PPP6R1Q9UPN7 881 aa21.42■■□□□ 1.02
CCDC30-207ENST00000471699 ADRA2BP18089 450 aa21.34■■□□□ 1.01
CCDC30-207ENST00000471699 PIAS4Q8N2W9 510 aaPredicted RBP21.11■□□□□ 0.97
CCDC30-207ENST00000471699 MSH5O43196 834 aa20.87■□□□□ 0.93
CCDC30-207ENST00000471699 POTEDQ86YR6 584 aa19.81■□□□□ 0.76
CCDC30-207ENST00000471699 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
CCDC30-207ENST00000471699 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
CCDC30-207ENST00000471699 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
CCDC30-207ENST00000471699 DMRT2Q9Y5R5 561 aa19.26■□□□□ 0.67
CCDC30-207ENST00000471699 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
CCDC30-207ENST00000471699 HOXD11P31277 338 aaPredicted RBP18.71■□□□□ 0.59
CCDC30-207ENST00000471699 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
CCDC30-207ENST00000471699 RNF216Q9NWF9 866 aaPredicted RBP18.64■□□□□ 0.57
CCDC30-207ENST00000471699 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
CCDC30-207ENST00000471699 KCNA4P22459 653 aa18.5■□□□□ 0.55
CCDC30-207ENST00000471699 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
CCDC30-207ENST00000471699 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
CCDC30-207ENST00000471699 RNF39Q9H2S5 420 aa17.91■□□□□ 0.46
CCDC30-207ENST00000471699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCDC30-207ENST00000471699 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
CCDC30-207ENST00000471699 SLC4A2P04920 1241 aa17.61■□□□□ 0.41
CCDC30-207ENST00000471699 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
CCDC30-207ENST00000471699 U3KPZ7 1027 aaPredicted RBP17.52■□□□□ 0.4
CCDC30-207ENST00000471699 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
CCDC30-207ENST00000471699 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
CCDC30-207ENST00000471699 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
CCDC30-207ENST00000471699 ZBTB22O15209 634 aa17.08■□□□□ 0.32
CCDC30-207ENST00000471699 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
CCDC30-207ENST00000471699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
CCDC30-207ENST00000471699 CAPN15O75808 1086 aa17.02■□□□□ 0.32
CCDC30-207ENST00000471699 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
CCDC30-207ENST00000471699 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
CCDC30-207ENST00000471699 APLP2Q06481 763 aa16.9■□□□□ 0.3
CCDC30-207ENST00000471699 DSG3P32926 999 aa16.89■□□□□ 0.29
CCDC30-207ENST00000471699 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
CCDC30-207ENST00000471699 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
CCDC30-207ENST00000471699 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
CCDC30-207ENST00000471699 ABCB7O75027 752 aa16.71■□□□□ 0.27
CCDC30-207ENST00000471699 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
CCDC30-207ENST00000471699 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
CCDC30-207ENST00000471699 ATXN8OSP0DMR3 200 aa16.51■□□□□ 0.23
CCDC30-207ENST00000471699 POLA2Q14181 598 aa16.5■□□□□ 0.23
CCDC30-207ENST00000471699 ZBTB12Q9Y330 459 aaPredicted RBP16.14■□□□□ 0.17
CCDC30-207ENST00000471699 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.16
CCDC30-207ENST00000471699 OSCARQ8IYS5 282 aa16■□□□□ 0.15
CCDC30-207ENST00000471699 MKRN4PQ13434 485 aaPredicted RBP15.98■□□□□ 0.15
CCDC30-207ENST00000471699 FBLN2P98095 1184 aa15.91■□□□□ 0.14
CCDC30-207ENST00000471699 AKT1S1Q96B36 256 aa15.77■□□□□ 0.12
CCDC30-207ENST00000471699 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
CCDC30-207ENST00000471699 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
CCDC30-207ENST00000471699 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
CCDC30-207ENST00000471699 REM2Q8IYK8 340 aaPredicted RBP15.66■□□□□ 0.1
CCDC30-207ENST00000471699 SSUH2Q9Y2M2 353 aa15.6■□□□□ 0.09
CCDC30-207ENST00000471699 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
CCDC30-207ENST00000471699 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
CCDC30-207ENST00000471699 POTEHQ6S545 545 aa15.56■□□□□ 0.08
CCDC30-207ENST00000471699 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
CCDC30-207ENST00000471699 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCDC30-207ENST00000471699 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
CCDC30-207ENST00000471699 SPDYE1Q8NFV5 336 aaPredicted RBP15.33■□□□□ 0.04
CCDC30-207ENST00000471699 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
CCDC30-207ENST00000471699 FXR2P51116 673 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC30-207ENST00000471699 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
CCDC30-207ENST00000471699 PROM2Q8N271 834 aa15.1■□□□□ 0.01
CCDC30-207ENST00000471699 PRR29P0C7W0 189 aa15.07■□□□□ 0
CCDC30-207ENST00000471699 PRKAR2AP13861 404 aaKnown RBP15.06■□□□□ 0
CCDC30-207ENST00000471699 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
CCDC30-207ENST00000471699 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
CCDC30-207ENST00000471699 FKBP8Q14318 412 aa14.96□□□□□ -0.01
CCDC30-207ENST00000471699 HAX1O00165 279 aa14.87□□□□□ -0.03
CCDC30-207ENST00000471699 CREBZFQ9NS37 354 aa14.87□□□□□ -0.03
CCDC30-207ENST00000471699 EVX2Q03828 476 aa14.84□□□□□ -0.03
CCDC30-207ENST00000471699 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
CCDC30-207ENST00000471699 C19orf67A6NJJ6 358 aa14.78□□□□□ -0.04
CCDC30-207ENST00000471699 SP7Q8TDD2 431 aaPredicted RBP14.76□□□□□ -0.05
CCDC30-207ENST00000471699 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
CCDC30-207ENST00000471699 CD44P16070 742 aaKnown RBP14.62□□□□□ -0.07
CCDC30-207ENST00000471699 MIER1Q8N108 512 aa14.54□□□□□ -0.08
CCDC30-207ENST00000471699 NPM1P06748 294 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCDC30-207ENST00000471699 FBXO3Q9UK99 471 aa14.47□□□□□ -0.09
CCDC30-207ENST00000471699 PLCD3Q8N3E9 789 aa14.46□□□□□ -0.09
CCDC30-207ENST00000471699 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
CCDC30-207ENST00000471699 GABBR2O75899 941 aa14.45□□□□□ -0.1
CCDC30-207ENST00000471699 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
CCDC30-207ENST00000471699 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
CCDC30-207ENST00000471699 VASPP50552 380 aaPredicted RBP14.37□□□□□ -0.11
CCDC30-207ENST00000471699 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
CCDC30-207ENST00000471699 RASEFQ8IZ41 740 aa14.34□□□□□ -0.11
CCDC30-207ENST00000471699 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
CCDC30-207ENST00000471699 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
CCDC30-207ENST00000471699 NUBP1P53384 320 aa14.3□□□□□ -0.12
CCDC30-207ENST00000471699 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
CCDC30-207ENST00000471699 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
CCDC30-207ENST00000471699 CLCN6P51797 869 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms