RNA–Protein interactions for RNA: ENST00000471693.1

SRRM1-209, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 377 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-209ENST00000471693 AEBP2Q6ZN18 517 aaPredicted RBP29.48■■■□□ 2.31
SRRM1-209ENST00000471693 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
SRRM1-209ENST00000471693 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
SRRM1-209ENST00000471693 PHF23Q9BUL5 403 aaPredicted RBP24.9■■□□□ 1.58
SRRM1-209ENST00000471693 FOXD1Q16676 465 aa23.44■■□□□ 1.34
SRRM1-209ENST00000471693 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
SRRM1-209ENST00000471693 PIAS4Q8N2W9 510 aaPredicted RBP22.03■■□□□ 1.12
SRRM1-209ENST00000471693 MSH5O43196 834 aa22■■□□□ 1.11
SRRM1-209ENST00000471693 ADRA2BP18089 450 aa21.98■■□□□ 1.11
SRRM1-209ENST00000471693 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
SRRM1-209ENST00000471693 POTEDQ86YR6 584 aa21.06■□□□□ 0.96
SRRM1-209ENST00000471693 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
SRRM1-209ENST00000471693 MAPK8IP2Q13387 824 aaPredicted RBP20.09■□□□□ 0.81
SRRM1-209ENST00000471693 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
SRRM1-209ENST00000471693 PPP4R3CPQ6ZMV5 832 aa19.89■□□□□ 0.77
SRRM1-209ENST00000471693 CNKSR2Q8WXI2 1034 aa19.52■□□□□ 0.72
SRRM1-209ENST00000471693 HOXD11P31277 338 aaPredicted RBP19.35■□□□□ 0.69
SRRM1-209ENST00000471693 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
SRRM1-209ENST00000471693 RNF216Q9NWF9 866 aaPredicted RBP19.29■□□□□ 0.68
SRRM1-209ENST00000471693 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
SRRM1-209ENST00000471693 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
SRRM1-209ENST00000471693 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
SRRM1-209ENST00000471693 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
SRRM1-209ENST00000471693 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
SRRM1-209ENST00000471693 KCNA4P22459 653 aa18.67■□□□□ 0.58
SRRM1-209ENST00000471693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.56
SRRM1-209ENST00000471693 C1QBPQ07021 282 aaKnown RBP18.51■□□□□ 0.55
SRRM1-209ENST00000471693 U3KPZ7 1027 aaPredicted RBP18.07■□□□□ 0.48
SRRM1-209ENST00000471693 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
SRRM1-209ENST00000471693 CAPN15O75808 1086 aa17.79■□□□□ 0.44
SRRM1-209ENST00000471693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
SRRM1-209ENST00000471693 APLP2Q06481 763 aa17.78■□□□□ 0.44
SRRM1-209ENST00000471693 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
SRRM1-209ENST00000471693 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
SRRM1-209ENST00000471693 SPINK5Q9NQ38 1064 aaPredicted RBP17.73■□□□□ 0.43
SRRM1-209ENST00000471693 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.41
SRRM1-209ENST00000471693 DSG3P32926 999 aa17.57■□□□□ 0.4
SRRM1-209ENST00000471693 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
SRRM1-209ENST00000471693 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
SRRM1-209ENST00000471693 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
SRRM1-209ENST00000471693 FOXD4L1Q9NU39 408 aa17.45■□□□□ 0.38
SRRM1-209ENST00000471693 ABCB7O75027 752 aa17.34■□□□□ 0.37
SRRM1-209ENST00000471693 ZBTB22O15209 634 aa17.1■□□□□ 0.33
SRRM1-209ENST00000471693 POLA2Q14181 598 aa17.06■□□□□ 0.32
SRRM1-209ENST00000471693 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
SRRM1-209ENST00000471693 ATXN8OSP0DMR3 200 aa16.91■□□□□ 0.3
SRRM1-209ENST00000471693 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
SRRM1-209ENST00000471693 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
SRRM1-209ENST00000471693 POTEHQ6S545 545 aa16.58■□□□□ 0.24
SRRM1-209ENST00000471693 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
SRRM1-209ENST00000471693 FBLN2P98095 1184 aa16.51■□□□□ 0.23
SRRM1-209ENST00000471693 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
SRRM1-209ENST00000471693 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
SRRM1-209ENST00000471693 EHMT2Q96KQ7 1210 aa16.47■□□□□ 0.23
SRRM1-209ENST00000471693 CHRDL2Q6WN34 429 aa16.37■□□□□ 0.21
SRRM1-209ENST00000471693 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
SRRM1-209ENST00000471693 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
SRRM1-209ENST00000471693 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
SRRM1-209ENST00000471693 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
SRRM1-209ENST00000471693 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
SRRM1-209ENST00000471693 ZNF692Q9BU19 519 aaPredicted RBP16.11■□□□□ 0.17
SRRM1-209ENST00000471693 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
SRRM1-209ENST00000471693 SSUH2Q9Y2M2 353 aa16.04■□□□□ 0.16
SRRM1-209ENST00000471693 SPDYE1Q8NFV5 336 aaPredicted RBP15.99■□□□□ 0.15
SRRM1-209ENST00000471693 PIP4P2Q8N4L2 257 aa15.98■□□□□ 0.15
SRRM1-209ENST00000471693 CLEC11AQ9Y240 323 aa15.92■□□□□ 0.14
SRRM1-209ENST00000471693 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.14
SRRM1-209ENST00000471693 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
SRRM1-209ENST00000471693 PRKAR2AP13861 404 aaKnown RBP15.72■□□□□ 0.11
SRRM1-209ENST00000471693 HAX1O00165 279 aa15.7■□□□□ 0.1
SRRM1-209ENST00000471693 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
SRRM1-209ENST00000471693 SPDYE4A6NLX3 237 aa15.66■□□□□ 0.1
SRRM1-209ENST00000471693 SP7Q8TDD2 431 aaPredicted RBP15.64■□□□□ 0.09
SRRM1-209ENST00000471693 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
SRRM1-209ENST00000471693 CHADLQ6NUI6 762 aa15.52■□□□□ 0.08
SRRM1-209ENST00000471693 C19orf67A6NJJ6 358 aa15.4■□□□□ 0.06
SRRM1-209ENST00000471693 EVX2Q03828 476 aa15.36■□□□□ 0.05
SRRM1-209ENST00000471693 FARP1Q9Y4F1 1045 aaPredicted RBP15.36■□□□□ 0.05
SRRM1-209ENST00000471693 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
SRRM1-209ENST00000471693 CD44P16070 742 aaKnown RBP15.25■□□□□ 0.03
SRRM1-209ENST00000471693 PROM2Q8N271 834 aa15.23■□□□□ 0.03
SRRM1-209ENST00000471693 GABBR2O75899 941 aa15.13■□□□□ 0.01
SRRM1-209ENST00000471693 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
SRRM1-209ENST00000471693 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
SRRM1-209ENST00000471693 CLCN6P51797 869 aa15.08■□□□□ 0
SRRM1-209ENST00000471693 ZRANB1Q9UGI0 708 aa15.06■□□□□ 0
SRRM1-209ENST00000471693 FKBP8Q14318 412 aa15.05■□□□□ -0
SRRM1-209ENST00000471693 PLEKHG5O94827 1062 aa15.04■□□□□ -0
SRRM1-209ENST00000471693 ZNF579Q8NAF0 562 aaKnown RBP15.01□□□□□ -0.01
SRRM1-209ENST00000471693 MNX1P50219 401 aaPredicted RBP14.99□□□□□ -0.01
SRRM1-209ENST00000471693 MIER1Q8N108 512 aa14.93□□□□□ -0.02
SRRM1-209ENST00000471693 PLCD3Q8N3E9 789 aa14.87□□□□□ -0.03
SRRM1-209ENST00000471693 DCBLD2Q96PD2 775 aa14.85□□□□□ -0.03
SRRM1-209ENST00000471693 PHF12Q96QT6 1004 aa14.82□□□□□ -0.04
SRRM1-209ENST00000471693 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
SRRM1-209ENST00000471693 TSPYL2Q9H2G4 693 aaPredicted RBP14.78□□□□□ -0.04
SRRM1-209ENST00000471693 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
SRRM1-209ENST00000471693 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
SRRM1-209ENST00000471693 POTEIP0CG38 1075 aa14.73□□□□□ -0.05
SRRM1-209ENST00000471693 CCDC61Q9Y6R9 512 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms