RNA–Protein interactions for RNA: ENST00000471623.1

ZCCHC11-209, Transcript of Terminal uridylyltransferase 4, humanhuman

TSL 3

Gene ZCCHC11, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC11-209ENST00000471623 AEBP2Q6ZN18 517 aaPredicted RBP31.09■■■□□ 2.57
ZCCHC11-209ENST00000471623 CHIC1Q5VXU3 224 aa29.84■■■□□ 2.37
ZCCHC11-209ENST00000471623 SENP3Q9H4L4 574 aaPredicted RBP26.47■■□□□ 1.83
ZCCHC11-209ENST00000471623 PHF23Q9BUL5 403 aaPredicted RBP26.18■■□□□ 1.78
ZCCHC11-209ENST00000471623 FOXD1Q16676 465 aa24.62■■□□□ 1.53
ZCCHC11-209ENST00000471623 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
ZCCHC11-209ENST00000471623 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
ZCCHC11-209ENST00000471623 ADRA2BP18089 450 aa23.22■■□□□ 1.31
ZCCHC11-209ENST00000471623 PIAS4Q8N2W9 510 aaPredicted RBP23.1■■□□□ 1.29
ZCCHC11-209ENST00000471623 MSH5O43196 834 aa22.92■■□□□ 1.26
ZCCHC11-209ENST00000471623 POTEDQ86YR6 584 aa21.83■■□□□ 1.09
ZCCHC11-209ENST00000471623 SCAF1Q9H7N4 1312 aaKnown RBP21.24■□□□□ 0.99
ZCCHC11-209ENST00000471623 MAPK8IP2Q13387 824 aaPredicted RBP21.23■□□□□ 0.99
ZCCHC11-209ENST00000471623 PPP4R3CPQ6ZMV5 832 aa21.07■□□□□ 0.96
ZCCHC11-209ENST00000471623 DMRT2Q9Y5R5 561 aa21.04■□□□□ 0.96
ZCCHC11-209ENST00000471623 CNKSR2Q8WXI2 1034 aa20.59■□□□□ 0.89
ZCCHC11-209ENST00000471623 HOXD11P31277 338 aaPredicted RBP20.39■□□□□ 0.85
ZCCHC11-209ENST00000471623 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
ZCCHC11-209ENST00000471623 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
ZCCHC11-209ENST00000471623 DCAF8L1A6NGE4 600 aa20.16■□□□□ 0.82
ZCCHC11-209ENST00000471623 NPM3O75607 178 aaKnown RBP20.07■□□□□ 0.8
ZCCHC11-209ENST00000471623 KCNA4P22459 653 aa19.98■□□□□ 0.79
ZCCHC11-209ENST00000471623 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
ZCCHC11-209ENST00000471623 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
ZCCHC11-209ENST00000471623 CACNB1Q02641 598 aaPredicted RBP19.47■□□□□ 0.71
ZCCHC11-209ENST00000471623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.79e-7■■□□□ 12.2
ZCCHC11-209ENST00000471623 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
ZCCHC11-209ENST00000471623 SLC4A2P04920 1241 aa19.08■□□□□ 0.64
ZCCHC11-209ENST00000471623 U3KPZ7 1027 aaPredicted RBP19.06■□□□□ 0.64
ZCCHC11-209ENST00000471623 SLC4A1APQ9BWU0 796 aaKnown RBP18.93■□□□□ 0.62
ZCCHC11-209ENST00000471623 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
ZCCHC11-209ENST00000471623 CAPN15O75808 1086 aa18.64■□□□□ 0.57
ZCCHC11-209ENST00000471623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
ZCCHC11-209ENST00000471623 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
ZCCHC11-209ENST00000471623 MYCNP04198 464 aaPredicted RBP18.56■□□□□ 0.56
ZCCHC11-209ENST00000471623 APLP2Q06481 763 aa18.56■□□□□ 0.56
ZCCHC11-209ENST00000471623 SAMD1Q6SPF0 538 aaPredicted RBP18.55■□□□□ 0.56
ZCCHC11-209ENST00000471623 FOXD4L1Q9NU39 408 aa18.55■□□□□ 0.56
ZCCHC11-209ENST00000471623 DSG3P32926 999 aa18.46■□□□□ 0.55
ZCCHC11-209ENST00000471623 TRHP20396 242 aaPredicted RBP18.42■□□□□ 0.54
ZCCHC11-209ENST00000471623 ZNF219Q9P2Y4 722 aaPredicted RBP18.4■□□□□ 0.54
ZCCHC11-209ENST00000471623 ZBTB22O15209 634 aa18.39■□□□□ 0.53
ZCCHC11-209ENST00000471623 ABCB7O75027 752 aa18.24■□□□□ 0.51
ZCCHC11-209ENST00000471623 ATF5Q9Y2D1 282 aaPredicted RBP18.1■□□□□ 0.49
ZCCHC11-209ENST00000471623 POLA2Q14181 598 aa18■□□□□ 0.47
ZCCHC11-209ENST00000471623 ATXN8OSP0DMR3 200 aa17.94■□□□□ 0.46
ZCCHC11-209ENST00000471623 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
ZCCHC11-209ENST00000471623 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
ZCCHC11-209ENST00000471623 ZBTB12Q9Y330 459 aaPredicted RBP17.67■□□□□ 0.42
ZCCHC11-209ENST00000471623 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
ZCCHC11-209ENST00000471623 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
ZCCHC11-209ENST00000471623 FBLN2P98095 1184 aa17.37■□□□□ 0.37
ZCCHC11-209ENST00000471623 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
ZCCHC11-209ENST00000471623 AKT1S1Q96B36 256 aa17.27■□□□□ 0.36
ZCCHC11-209ENST00000471623 POTEHQ6S545 545 aa17.16■□□□□ 0.34
ZCCHC11-209ENST00000471623 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
ZCCHC11-209ENST00000471623 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
ZCCHC11-209ENST00000471623 SPDYE2Q495Y8 402 aa17.15■□□□□ 0.34
ZCCHC11-209ENST00000471623 REM2Q8IYK8 340 aaPredicted RBP17.1■□□□□ 0.33
ZCCHC11-209ENST00000471623 CHRDL2Q6WN34 429 aa17.09■□□□□ 0.33
ZCCHC11-209ENST00000471623 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
ZCCHC11-209ENST00000471623 SSUH2Q9Y2M2 353 aa16.96■□□□□ 0.31
ZCCHC11-209ENST00000471623 PITPNM1O00562 1244 aa16.92■□□□□ 0.3
ZCCHC11-209ENST00000471623 SPDYE1Q8NFV5 336 aaPredicted RBP16.77■□□□□ 0.28
ZCCHC11-209ENST00000471623 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
ZCCHC11-209ENST00000471623 PIP4P2Q8N4L2 257 aa16.75■□□□□ 0.27
ZCCHC11-209ENST00000471623 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
ZCCHC11-209ENST00000471623 FXR2P51116 673 aaKnown RBP eCLIP16.7■□□□□ 0.26
ZCCHC11-209ENST00000471623 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
ZCCHC11-209ENST00000471623 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
ZCCHC11-209ENST00000471623 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
ZCCHC11-209ENST00000471623 CHADLQ6NUI6 762 aa16.37■□□□□ 0.21
ZCCHC11-209ENST00000471623 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
ZCCHC11-209ENST00000471623 HAX1O00165 279 aa16.35■□□□□ 0.21
ZCCHC11-209ENST00000471623 PROM2Q8N271 834 aa16.29■□□□□ 0.2
ZCCHC11-209ENST00000471623 SP7Q8TDD2 431 aaPredicted RBP16.24■□□□□ 0.19
ZCCHC11-209ENST00000471623 EVX2Q03828 476 aa16.17■□□□□ 0.18
ZCCHC11-209ENST00000471623 FARP1Q9Y4F1 1045 aaPredicted RBP16.17■□□□□ 0.18
ZCCHC11-209ENST00000471623 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
ZCCHC11-209ENST00000471623 CREBZFQ9NS37 354 aa16.16■□□□□ 0.18
ZCCHC11-209ENST00000471623 FKBP8Q14318 412 aa16.15■□□□□ 0.18
ZCCHC11-209ENST00000471623 CD44P16070 742 aaKnown RBP15.99■□□□□ 0.15
ZCCHC11-209ENST00000471623 MNX1P50219 401 aaPredicted RBP15.93■□□□□ 0.14
ZCCHC11-209ENST00000471623 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
ZCCHC11-209ENST00000471623 GABBR2O75899 941 aa15.83■□□□□ 0.12
ZCCHC11-209ENST00000471623 MIER1Q8N108 512 aa15.83■□□□□ 0.12
ZCCHC11-209ENST00000471623 ZRANB1Q9UGI0 708 aa15.81■□□□□ 0.12
ZCCHC11-209ENST00000471623 PLEKHG5O94827 1062 aa15.79■□□□□ 0.12
ZCCHC11-209ENST00000471623 ZNF579Q8NAF0 562 aaKnown RBP15.76■□□□□ 0.11
ZCCHC11-209ENST00000471623 PAK3O75914 559 aaPredicted RBP15.75■□□□□ 0.11
ZCCHC11-209ENST00000471623 PLCD3Q8N3E9 789 aa15.75■□□□□ 0.11
ZCCHC11-209ENST00000471623 FBXO3Q9UK99 471 aa15.72■□□□□ 0.11
ZCCHC11-209ENST00000471623 CLCN6P51797 869 aa15.69■□□□□ 0.1
ZCCHC11-209ENST00000471623 PHF12Q96QT6 1004 aa15.63■□□□□ 0.09
ZCCHC11-209ENST00000471623 TSPYL2Q9H2G4 693 aaPredicted RBP15.61■□□□□ 0.09
ZCCHC11-209ENST00000471623 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
ZCCHC11-209ENST00000471623 RASEFQ8IZ41 740 aa15.56■□□□□ 0.08
ZCCHC11-209ENST00000471623 GALR2O43603 387 aaPredicted RBP15.54■□□□□ 0.08
ZCCHC11-209ENST00000471623 VASPP50552 380 aaPredicted RBP15.53■□□□□ 0.08
ZCCHC11-209ENST00000471623 CCDC61Q9Y6R9 512 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms