RNA–Protein interactions for RNA: ENST00000471368.1

TRAF3IP3-209, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 3

Gene TRAF3IP3, Length 551 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-209ENST00000471368 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
TRAF3IP3-209ENST00000471368 CHIC1Q5VXU3 224 aa25.95■■□□□ 1.74
TRAF3IP3-209ENST00000471368 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
TRAF3IP3-209ENST00000471368 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
TRAF3IP3-209ENST00000471368 FOXD1Q16676 465 aa21.69■■□□□ 1.06
TRAF3IP3-209ENST00000471368 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
TRAF3IP3-209ENST00000471368 PPP6R1Q9UPN7 881 aa20.31■□□□□ 0.84
TRAF3IP3-209ENST00000471368 MSH5O43196 834 aa20.27■□□□□ 0.84
TRAF3IP3-209ENST00000471368 PIAS4Q8N2W9 510 aaPredicted RBP20.2■□□□□ 0.82
TRAF3IP3-209ENST00000471368 ADRA2BP18089 450 aa20.19■□□□□ 0.82
TRAF3IP3-209ENST00000471368 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
TRAF3IP3-209ENST00000471368 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
TRAF3IP3-209ENST00000471368 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
TRAF3IP3-209ENST00000471368 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
TRAF3IP3-209ENST00000471368 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
TRAF3IP3-209ENST00000471368 HOXD11P31277 338 aaPredicted RBP17.83■□□□□ 0.44
TRAF3IP3-209ENST00000471368 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
TRAF3IP3-209ENST00000471368 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
TRAF3IP3-209ENST00000471368 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
TRAF3IP3-209ENST00000471368 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
TRAF3IP3-209ENST00000471368 RNF39Q9H2S5 420 aa17.33■□□□□ 0.36
TRAF3IP3-209ENST00000471368 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
TRAF3IP3-209ENST00000471368 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.36
TRAF3IP3-209ENST00000471368 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
TRAF3IP3-209ENST00000471368 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
TRAF3IP3-209ENST00000471368 KCNA4P22459 653 aa16.89■□□□□ 0.29
TRAF3IP3-209ENST00000471368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
TRAF3IP3-209ENST00000471368 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
TRAF3IP3-209ENST00000471368 SLC4A2P04920 1241 aa16.48■□□□□ 0.23
TRAF3IP3-209ENST00000471368 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
TRAF3IP3-209ENST00000471368 CAPN15O75808 1086 aa16.23■□□□□ 0.19
TRAF3IP3-209ENST00000471368 DSG3P32926 999 aa16.23■□□□□ 0.19
TRAF3IP3-209ENST00000471368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
TRAF3IP3-209ENST00000471368 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
TRAF3IP3-209ENST00000471368 APLP2Q06481 763 aa16.07■□□□□ 0.16
TRAF3IP3-209ENST00000471368 SAMD1Q6SPF0 538 aaPredicted RBP16.01■□□□□ 0.15
TRAF3IP3-209ENST00000471368 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
TRAF3IP3-209ENST00000471368 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
TRAF3IP3-209ENST00000471368 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
TRAF3IP3-209ENST00000471368 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
TRAF3IP3-209ENST00000471368 ABCB7O75027 752 aa15.85■□□□□ 0.13
TRAF3IP3-209ENST00000471368 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
TRAF3IP3-209ENST00000471368 POLA2Q14181 598 aa15.59■□□□□ 0.09
TRAF3IP3-209ENST00000471368 ZBTB22O15209 634 aa15.56■□□□□ 0.08
TRAF3IP3-209ENST00000471368 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
TRAF3IP3-209ENST00000471368 POTEHQ6S545 545 aa15.47■□□□□ 0.07
TRAF3IP3-209ENST00000471368 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
TRAF3IP3-209ENST00000471368 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
TRAF3IP3-209ENST00000471368 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
TRAF3IP3-209ENST00000471368 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
TRAF3IP3-209ENST00000471368 CHRDL2Q6WN34 429 aa15.09■□□□□ 0.01
TRAF3IP3-209ENST00000471368 OSCARQ8IYS5 282 aa15.08■□□□□ 0
TRAF3IP3-209ENST00000471368 REM2Q8IYK8 340 aaPredicted RBP14.96□□□□□ -0.01
TRAF3IP3-209ENST00000471368 FBLN2P98095 1184 aa14.88□□□□□ -0.03
TRAF3IP3-209ENST00000471368 MKRN4PQ13434 485 aaPredicted RBP14.87□□□□□ -0.03
TRAF3IP3-209ENST00000471368 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
TRAF3IP3-209ENST00000471368 SPDYE2BA6NHP3 402 aa14.84□□□□□ -0.03
TRAF3IP3-209ENST00000471368 SPDYE6P0CI01 402 aa14.84□□□□□ -0.03
TRAF3IP3-209ENST00000471368 SPDYE2Q495Y8 402 aa14.84□□□□□ -0.03
TRAF3IP3-209ENST00000471368 PITPNM1O00562 1244 aa14.79□□□□□ -0.04
TRAF3IP3-209ENST00000471368 PIP4P2Q8N4L2 257 aa14.76□□□□□ -0.05
TRAF3IP3-209ENST00000471368 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRAF3IP3-209ENST00000471368 SSUH2Q9Y2M2 353 aa14.68□□□□□ -0.06
TRAF3IP3-209ENST00000471368 ZNF692Q9BU19 519 aaPredicted RBP14.62□□□□□ -0.07
TRAF3IP3-209ENST00000471368 SPDYE1Q8NFV5 336 aaPredicted RBP14.55□□□□□ -0.08
TRAF3IP3-209ENST00000471368 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
TRAF3IP3-209ENST00000471368 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.09
TRAF3IP3-209ENST00000471368 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.09
TRAF3IP3-209ENST00000471368 HAX1O00165 279 aa14.41□□□□□ -0.1
TRAF3IP3-209ENST00000471368 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRAF3IP3-209ENST00000471368 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
TRAF3IP3-209ENST00000471368 EVX2Q03828 476 aa14.32□□□□□ -0.12
TRAF3IP3-209ENST00000471368 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
TRAF3IP3-209ENST00000471368 C19orf67A6NJJ6 358 aa14.23□□□□□ -0.13
TRAF3IP3-209ENST00000471368 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
TRAF3IP3-209ENST00000471368 SPDYE4A6NLX3 237 aa14.11□□□□□ -0.15
TRAF3IP3-209ENST00000471368 FARP1Q9Y4F1 1045 aaPredicted RBP14.05□□□□□ -0.16
TRAF3IP3-209ENST00000471368 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
TRAF3IP3-209ENST00000471368 GABBR2O75899 941 aa13.99□□□□□ -0.17
TRAF3IP3-209ENST00000471368 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
TRAF3IP3-209ENST00000471368 CD44P16070 742 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP3-209ENST00000471368 PROM2Q8N271 834 aa13.9□□□□□ -0.18
TRAF3IP3-209ENST00000471368 CLCN6P51797 869 aa13.82□□□□□ -0.2
TRAF3IP3-209ENST00000471368 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
TRAF3IP3-209ENST00000471368 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
TRAF3IP3-209ENST00000471368 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
TRAF3IP3-209ENST00000471368 ZRANB1Q9UGI0 708 aa13.72□□□□□ -0.21
TRAF3IP3-209ENST00000471368 NPM1P06748 294 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAF3IP3-209ENST00000471368 LHX8Q68G74 356 aa13.6□□□□□ -0.23
TRAF3IP3-209ENST00000471368 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
TRAF3IP3-209ENST00000471368 GALR2O43603 387 aaPredicted RBP13.57□□□□□ -0.24
TRAF3IP3-209ENST00000471368 DCBLD2Q96PD2 775 aa13.55□□□□□ -0.24
TRAF3IP3-209ENST00000471368 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
TRAF3IP3-209ENST00000471368 MIER1Q8N108 512 aa13.42□□□□□ -0.26
TRAF3IP3-209ENST00000471368 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
TRAF3IP3-209ENST00000471368 FKBP8Q14318 412 aa13.4□□□□□ -0.26
TRAF3IP3-209ENST00000471368 MS4A3Q96HJ5 214 aa13.39□□□□□ -0.27
TRAF3IP3-209ENST00000471368 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
TRAF3IP3-209ENST00000471368 TSPYL2Q9H2G4 693 aaPredicted RBP13.38□□□□□ -0.27
TRAF3IP3-209ENST00000471368 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms