RNA–Protein interactions for RNA: ENST00000471303.6

PAX6-215, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,423 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-215ENST00000471303 SLC24A1O60721 1099 aa27.39■■□□□ 1.97
PAX6-215ENST00000471303 EHMT2Q96KQ7 1210 aa25.11■■□□□ 1.61
PAX6-215ENST00000471303 DAXXQ9UER7 740 aaPredicted RBP24.95■■□□□ 1.58
PAX6-215ENST00000471303 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
PAX6-215ENST00000471303 PLPPR3Q6T4P5 718 aa24.72■■□□□ 1.55
PAX6-215ENST00000471303 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
PAX6-215ENST00000471303 RTN4Q9NQC3 1192 aaKnown RBP24.5■■□□□ 1.51
PAX6-215ENST00000471303 NCBP3Q53F19 620 aaKnown RBP24.35■■□□□ 1.49
PAX6-215ENST00000471303 TTBK1Q5TCY1 1321 aaPredicted RBP24.18■■□□□ 1.46
PAX6-215ENST00000471303 MYT1Q01538 1121 aa24.18■■□□□ 1.46
PAX6-215ENST00000471303 PRKCSHP14314 528 aaPredicted RBP24.13■■□□□ 1.45
PAX6-215ENST00000471303 APLP2Q06481 763 aa24.07■■□□□ 1.44
PAX6-215ENST00000471303 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.42
PAX6-215ENST00000471303 ERICH6Q7L0X2 663 aa23.7■■□□□ 1.38
PAX6-215ENST00000471303 AMER1Q5JTC6 1135 aaPredicted RBP23.69■■□□□ 1.38
PAX6-215ENST00000471303 KCNA4P22459 653 aa23.5■■□□□ 1.35
PAX6-215ENST00000471303 ARXQ96QS3 562 aa23.38■■□□□ 1.33
PAX6-215ENST00000471303 TIMELESSQ9UNS1 1208 aa23.31■■□□□ 1.32
PAX6-215ENST00000471303 CSRNP3Q8WYN3 585 aa23.24■■□□□ 1.31
PAX6-215ENST00000471303 AEBP2Q6ZN18 517 aaPredicted RBP23■■□□□ 1.27
PAX6-215ENST00000471303 TULP1O00294 542 aaPredicted RBP22.89■■□□□ 1.26
PAX6-215ENST00000471303 RANGAP1P46060 587 aaPredicted RBP22.79■■□□□ 1.24
PAX6-215ENST00000471303 TAOK2Q9UL54 1235 aa22.77■■□□□ 1.24
PAX6-215ENST00000471303 KLHL34Q8N239 644 aa22.67■■□□□ 1.22
PAX6-215ENST00000471303 HOMEZQ8IX15 550 aa22.63■■□□□ 1.21
PAX6-215ENST00000471303 EIF5BO60841 1220 aaKnown RBP22.62■■□□□ 1.21
PAX6-215ENST00000471303 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
PAX6-215ENST00000471303 TPRNQ4KMQ1 711 aa22.4■■□□□ 1.18
PAX6-215ENST00000471303 PODXL2Q9NZ53 605 aa22.35■■□□□ 1.17
PAX6-215ENST00000471303 BCANQ96GW7 911 aa22.31■■□□□ 1.16
PAX6-215ENST00000471303 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
PAX6-215ENST00000471303 PLEKHG5O94827 1062 aa22.03■■□□□ 1.12
PAX6-215ENST00000471303 PLCB2Q00722 1185 aa21.9■■□□□ 1.1
PAX6-215ENST00000471303 NPM2Q86SE8 214 aaKnown RBP21.84■■□□□ 1.09
PAX6-215ENST00000471303 SLC4A1APQ9BWU0 796 aaKnown RBP21.78■■□□□ 1.08
PAX6-215ENST00000471303 HAP1P54257 671 aaPredicted RBP21.72■■□□□ 1.07
PAX6-215ENST00000471303 C14orf37Q86TY3 774 aa21.6■■□□□ 1.05
PAX6-215ENST00000471303 TMEM132AQ24JP5 1023 aa21.55■■□□□ 1.04
PAX6-215ENST00000471303 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
PAX6-215ENST00000471303 TRIM26Q12899 539 aaPredicted RBP21.39■■□□□ 1.02
PAX6-215ENST00000471303 FBXO3Q9UK99 471 aa21.36■■□□□ 1.01
PAX6-215ENST00000471303 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
PAX6-215ENST00000471303 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
PAX6-215ENST00000471303 ZBTB22O15209 634 aa21.15■□□□□ 0.98
PAX6-215ENST00000471303 HRCP23327 699 aa21.13■□□□□ 0.97
PAX6-215ENST00000471303 VSIG10Q8N0Z9 540 aa21.08■□□□□ 0.96
PAX6-215ENST00000471303 UBTFP17480 764 aaKnown RBP21.06■□□□□ 0.96
PAX6-215ENST00000471303 KDM2AQ9Y2K7 1162 aa21.06■□□□□ 0.96
PAX6-215ENST00000471303 PDIA4P13667 645 aaKnown RBP20.99■□□□□ 0.95
PAX6-215ENST00000471303 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
PAX6-215ENST00000471303 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
PAX6-215ENST00000471303 FBLN2P98095 1184 aa20.87■□□□□ 0.93
PAX6-215ENST00000471303 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
PAX6-215ENST00000471303 CHMP4AQ9BY43 222 aa20.84■□□□□ 0.93
PAX6-215ENST00000471303 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
PAX6-215ENST00000471303 UBE2Q2Q8WVN8 375 aa20.75■□□□□ 0.91
PAX6-215ENST00000471303 FKBP8Q14318 412 aa20.74■□□□□ 0.91
PAX6-215ENST00000471303 SAMD1Q6SPF0 538 aaPredicted RBP20.68■□□□□ 0.9
PAX6-215ENST00000471303 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
PAX6-215ENST00000471303 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
PAX6-215ENST00000471303 ADRA2BP18089 450 aa20.64■□□□□ 0.89
PAX6-215ENST00000471303 DHX37Q8IY37 1157 aaKnown RBP20.55■□□□□ 0.88
PAX6-215ENST00000471303 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
PAX6-215ENST00000471303 PDE4CQ08493 712 aa20.52■□□□□ 0.87
PAX6-215ENST00000471303 CDK11BP21127 795 aaKnown RBP20.5■□□□□ 0.87
PAX6-215ENST00000471303 CDK11AQ9UQ88 783 aaPredicted RBP20.5■□□□□ 0.87
PAX6-215ENST00000471303 IGSF3O75054 1194 aa20.49■□□□□ 0.87
PAX6-215ENST00000471303 BRD2P25440 801 aaKnown RBP20.37■□□□□ 0.85
PAX6-215ENST00000471303 NPM3O75607 178 aaKnown RBP20.26■□□□□ 0.83
PAX6-215ENST00000471303 TAF7LQ5H9L4 462 aa20.25■□□□□ 0.83
PAX6-215ENST00000471303 NEFLP07196 543 aa20.17■□□□□ 0.82
PAX6-215ENST00000471303 HSP90B1P14625 803 aaKnown RBP20.12■□□□□ 0.81
PAX6-215ENST00000471303 CFAP44Q96MT7 982 aa20.12■□□□□ 0.81
PAX6-215ENST00000471303 PKNOX2Q96KN3 472 aa20.11■□□□□ 0.81
PAX6-215ENST00000471303 CCDC9Q9Y3X0 531 aaKnown RBP20.06■□□□□ 0.8
PAX6-215ENST00000471303 BCL11BQ9C0K0 894 aaPredicted RBP20.05■□□□□ 0.8
PAX6-215ENST00000471303 DCAF1Q9Y4B6 1507 aa20.04■□□□□ 0.8
PAX6-215ENST00000471303 HMGB1P09429 215 aaKnown RBP19.98■□□□□ 0.79
PAX6-215ENST00000471303 NBR1Q14596 966 aa19.96■□□□□ 0.79
PAX6-215ENST00000471303 PAXIP1Q6ZW49 1069 aaPredicted RBP19.87■□□□□ 0.77
PAX6-215ENST00000471303 PUS7Q96PZ0 661 aaKnown RBP19.87■□□□□ 0.77
PAX6-215ENST00000471303 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
PAX6-215ENST00000471303 ARID3AQ99856 593 aa19.86■□□□□ 0.77
PAX6-215ENST00000471303 TSHZ2Q9NRE2 1034 aa19.86■□□□□ 0.77
PAX6-215ENST00000471303 NECTIN2Q92692 538 aa19.84■□□□□ 0.77
PAX6-215ENST00000471303 POLR3GLQ9BT43 218 aa19.84■□□□□ 0.77
PAX6-215ENST00000471303 FGD1P98174 961 aa19.8■□□□□ 0.76
PAX6-215ENST00000471303 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.77■□□□□ 0.76
PAX6-215ENST00000471303 ABCC9O60706 1549 aa19.74■□□□□ 0.75
PAX6-215ENST00000471303 ZBTB7CA1YPR0 619 aa19.68■□□□□ 0.74
PAX6-215ENST00000471303 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
PAX6-215ENST00000471303 CCDC136Q96JN2 1154 aa19.63■□□□□ 0.73
PAX6-215ENST00000471303 IRX6P78412 446 aaPredicted RBP19.6■□□□□ 0.73
PAX6-215ENST00000471303 NPM1P06748 294 aaKnown RBP eCLIP19.56■□□□□ 0.72
PAX6-215ENST00000471303 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.56■□□□□ 0.72
PAX6-215ENST00000471303 BCCIPQ9P287 314 aaKnown RBP eCLIP19.56■□□□□ 0.72
PAX6-215ENST00000471303 C1orf115Q9H7X2 142 aa19.55■□□□□ 0.72
PAX6-215ENST00000471303 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
PAX6-215ENST00000471303 RSPH4AQ5TD94 716 aa19.53■□□□□ 0.72
PAX6-215ENST00000471303 ZNF428Q96B54 188 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms