RNA–Protein interactions for RNA: ENST00000471271.5

CARF-220, Transcript of calcium responsive transcription factor, humanhuman

TSL 2

Gene CARF, Length 929 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-220ENST00000471271 AEBP2Q6ZN18 517 aaPredicted RBP26.32■■□□□ 1.8
CARF-220ENST00000471271 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
CARF-220ENST00000471271 SENP3Q9H4L4 574 aaPredicted RBP22.28■■□□□ 1.16
CARF-220ENST00000471271 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
CARF-220ENST00000471271 FOXD1Q16676 465 aa20.88■□□□□ 0.93
CARF-220ENST00000471271 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
CARF-220ENST00000471271 PPP6R1Q9UPN7 881 aa19.65■□□□□ 0.74
CARF-220ENST00000471271 ADRA2BP18089 450 aa19.6■□□□□ 0.73
CARF-220ENST00000471271 PIAS4Q8N2W9 510 aaPredicted RBP19.53■□□□□ 0.72
CARF-220ENST00000471271 MSH5O43196 834 aa19.36■□□□□ 0.69
CARF-220ENST00000471271 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
CARF-220ENST00000471271 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
CARF-220ENST00000471271 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
CARF-220ENST00000471271 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
CARF-220ENST00000471271 PPP4R3CPQ6ZMV5 832 aa17.6■□□□□ 0.41
CARF-220ENST00000471271 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
CARF-220ENST00000471271 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
CARF-220ENST00000471271 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.32
CARF-220ENST00000471271 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
CARF-220ENST00000471271 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
CARF-220ENST00000471271 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
CARF-220ENST00000471271 CACNB1Q02641 598 aaPredicted RBP16.65■□□□□ 0.26
CARF-220ENST00000471271 RNF39Q9H2S5 420 aa16.58■□□□□ 0.24
CARF-220ENST00000471271 KCNA4P22459 653 aa16.54■□□□□ 0.24
CARF-220ENST00000471271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.21
CARF-220ENST00000471271 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
CARF-220ENST00000471271 C1QBPQ07021 282 aaKnown RBP16.28■□□□□ 0.2
CARF-220ENST00000471271 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
CARF-220ENST00000471271 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
CARF-220ENST00000471271 SPINK5Q9NQ38 1064 aaPredicted RBP15.83■□□□□ 0.12
CARF-220ENST00000471271 CAPN15O75808 1086 aa15.76■□□□□ 0.11
CARF-220ENST00000471271 DSG3P32926 999 aa15.6■□□□□ 0.09
CARF-220ENST00000471271 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
CARF-220ENST00000471271 TRHP20396 242 aaPredicted RBP15.56■□□□□ 0.08
CARF-220ENST00000471271 ABCB7O75027 752 aa15.48■□□□□ 0.07
CARF-220ENST00000471271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
CARF-220ENST00000471271 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
CARF-220ENST00000471271 APLP2Q06481 763 aa15.4■□□□□ 0.06
CARF-220ENST00000471271 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
CARF-220ENST00000471271 MYCNP04198 464 aaPredicted RBP15.39■□□□□ 0.05
CARF-220ENST00000471271 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
CARF-220ENST00000471271 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
CARF-220ENST00000471271 ZBTB22O15209 634 aa15.24■□□□□ 0.03
CARF-220ENST00000471271 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
CARF-220ENST00000471271 POLA2Q14181 598 aa15.13■□□□□ 0.01
CARF-220ENST00000471271 POTEHQ6S545 545 aa14.77□□□□□ -0.05
CARF-220ENST00000471271 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
CARF-220ENST00000471271 ATXN8OSP0DMR3 200 aa14.71□□□□□ -0.05
CARF-220ENST00000471271 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
CARF-220ENST00000471271 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
CARF-220ENST00000471271 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
CARF-220ENST00000471271 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
CARF-220ENST00000471271 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
CARF-220ENST00000471271 AKT1S1Q96B36 256 aa14.48□□□□□ -0.09
CARF-220ENST00000471271 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
CARF-220ENST00000471271 FBLN2P98095 1184 aa14.42□□□□□ -0.1
CARF-220ENST00000471271 REM2Q8IYK8 340 aaPredicted RBP14.42□□□□□ -0.1
CARF-220ENST00000471271 PITPNM1O00562 1244 aa14.3□□□□□ -0.12
CARF-220ENST00000471271 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
CARF-220ENST00000471271 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
CARF-220ENST00000471271 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
CARF-220ENST00000471271 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
CARF-220ENST00000471271 ZNF692Q9BU19 519 aaPredicted RBP14.2□□□□□ -0.14
CARF-220ENST00000471271 CLEC11AQ9Y240 323 aa14.12□□□□□ -0.15
CARF-220ENST00000471271 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
CARF-220ENST00000471271 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
CARF-220ENST00000471271 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
CARF-220ENST00000471271 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
CARF-220ENST00000471271 HAX1O00165 279 aa13.93□□□□□ -0.18
CARF-220ENST00000471271 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
CARF-220ENST00000471271 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
CARF-220ENST00000471271 SP7Q8TDD2 431 aaPredicted RBP13.88□□□□□ -0.19
CARF-220ENST00000471271 EVX2Q03828 476 aa13.86□□□□□ -0.19
CARF-220ENST00000471271 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
CARF-220ENST00000471271 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
CARF-220ENST00000471271 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
CARF-220ENST00000471271 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
CARF-220ENST00000471271 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
CARF-220ENST00000471271 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
CARF-220ENST00000471271 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
CARF-220ENST00000471271 GABBR2O75899 941 aa13.46□□□□□ -0.25
CARF-220ENST00000471271 PROM2Q8N271 834 aa13.38□□□□□ -0.27
CARF-220ENST00000471271 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
CARF-220ENST00000471271 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
CARF-220ENST00000471271 FKBP8Q14318 412 aa13.25□□□□□ -0.29
CARF-220ENST00000471271 POTEIP0CG38 1075 aa13.22□□□□□ -0.29
CARF-220ENST00000471271 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
CARF-220ENST00000471271 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
CARF-220ENST00000471271 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
CARF-220ENST00000471271 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
CARF-220ENST00000471271 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
CARF-220ENST00000471271 MIER1Q8N108 512 aa13.14□□□□□ -0.31
CARF-220ENST00000471271 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
CARF-220ENST00000471271 DCBLD2Q96PD2 775 aa13.09□□□□□ -0.31
CARF-220ENST00000471271 CLCN6P51797 869 aa13.04□□□□□ -0.32
CARF-220ENST00000471271 LHX8Q68G74 356 aa13.04□□□□□ -0.32
CARF-220ENST00000471271 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
CARF-220ENST00000471271 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
CARF-220ENST00000471271 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
CARF-220ENST00000471271 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms