RNA–Protein interactions for RNA: ENST00000471139.1

CCDC129-209, Transcript of Coiled-coil domain-containing protein 129, humanhuman

TSL 2

Gene CCDC129, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC129-209ENST00000471139 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
CCDC129-209ENST00000471139 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
CCDC129-209ENST00000471139 SENP3Q9H4L4 574 aaPredicted RBP23.03■■□□□ 1.28
CCDC129-209ENST00000471139 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
CCDC129-209ENST00000471139 FOXD1Q16676 465 aa21.51■■□□□ 1.03
CCDC129-209ENST00000471139 PLPPR3Q6T4P5 718 aa20.38■□□□□ 0.85
CCDC129-209ENST00000471139 MSH5O43196 834 aa20.12■□□□□ 0.81
CCDC129-209ENST00000471139 PIAS4Q8N2W9 510 aaPredicted RBP20.1■□□□□ 0.81
CCDC129-209ENST00000471139 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
CCDC129-209ENST00000471139 ADRA2BP18089 450 aa20.03■□□□□ 0.8
CCDC129-209ENST00000471139 POTEDQ86YR6 584 aa19.83■□□□□ 0.77
CCDC129-209ENST00000471139 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
CCDC129-209ENST00000471139 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
CCDC129-209ENST00000471139 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
CCDC129-209ENST00000471139 PPP4R3CPQ6ZMV5 832 aa17.89■□□□□ 0.45
CCDC129-209ENST00000471139 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.41
CCDC129-209ENST00000471139 CNKSR2Q8WXI2 1034 aa17.54■□□□□ 0.4
CCDC129-209ENST00000471139 HOXD11P31277 338 aaPredicted RBP17.52■□□□□ 0.4
CCDC129-209ENST00000471139 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
CCDC129-209ENST00000471139 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
CCDC129-209ENST00000471139 KCNA4P22459 653 aa17.31■□□□□ 0.36
CCDC129-209ENST00000471139 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
CCDC129-209ENST00000471139 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
CCDC129-209ENST00000471139 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
CCDC129-209ENST00000471139 C1QBPQ07021 282 aaKnown RBP16.91■□□□□ 0.3
CCDC129-209ENST00000471139 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
CCDC129-209ENST00000471139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC129-209ENST00000471139 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
CCDC129-209ENST00000471139 U3KPZ7 1027 aaPredicted RBP16.37■□□□□ 0.21
CCDC129-209ENST00000471139 CAPN15O75808 1086 aa16.21■□□□□ 0.19
CCDC129-209ENST00000471139 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
CCDC129-209ENST00000471139 SLC4A2P04920 1241 aa16.16■□□□□ 0.18
CCDC129-209ENST00000471139 DSG3P32926 999 aa16.07■□□□□ 0.16
CCDC129-209ENST00000471139 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
CCDC129-209ENST00000471139 ZBTB22O15209 634 aa15.98■□□□□ 0.15
CCDC129-209ENST00000471139 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
CCDC129-209ENST00000471139 APLP2Q06481 763 aa15.89■□□□□ 0.13
CCDC129-209ENST00000471139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
CCDC129-209ENST00000471139 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
CCDC129-209ENST00000471139 ABCB7O75027 752 aa15.84■□□□□ 0.13
CCDC129-209ENST00000471139 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
CCDC129-209ENST00000471139 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
CCDC129-209ENST00000471139 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
CCDC129-209ENST00000471139 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
CCDC129-209ENST00000471139 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
CCDC129-209ENST00000471139 POTEHQ6S545 545 aa15.53■□□□□ 0.08
CCDC129-209ENST00000471139 POLA2Q14181 598 aa15.47■□□□□ 0.07
CCDC129-209ENST00000471139 ATF5Q9Y2D1 282 aaPredicted RBP15.37■□□□□ 0.05
CCDC129-209ENST00000471139 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
CCDC129-209ENST00000471139 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
CCDC129-209ENST00000471139 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
CCDC129-209ENST00000471139 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
CCDC129-209ENST00000471139 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
CCDC129-209ENST00000471139 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
CCDC129-209ENST00000471139 REM2Q8IYK8 340 aaPredicted RBP14.85□□□□□ -0.03
CCDC129-209ENST00000471139 FBLN2P98095 1184 aa14.72□□□□□ -0.05
CCDC129-209ENST00000471139 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
CCDC129-209ENST00000471139 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
CCDC129-209ENST00000471139 MKRN4PQ13434 485 aaPredicted RBP14.66□□□□□ -0.06
CCDC129-209ENST00000471139 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
CCDC129-209ENST00000471139 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
CCDC129-209ENST00000471139 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
CCDC129-209ENST00000471139 FXR2P51116 673 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC129-209ENST00000471139 SP7Q8TDD2 431 aaPredicted RBP14.51□□□□□ -0.09
CCDC129-209ENST00000471139 HAX1O00165 279 aa14.5□□□□□ -0.09
CCDC129-209ENST00000471139 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
CCDC129-209ENST00000471139 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
CCDC129-209ENST00000471139 SPDYE1Q8NFV5 336 aaPredicted RBP14.4□□□□□ -0.1
CCDC129-209ENST00000471139 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
CCDC129-209ENST00000471139 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
CCDC129-209ENST00000471139 EVX2Q03828 476 aa14.28□□□□□ -0.12
CCDC129-209ENST00000471139 FKBP8Q14318 412 aa14.27□□□□□ -0.13
CCDC129-209ENST00000471139 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.13
CCDC129-209ENST00000471139 SPDYE4A6NLX3 237 aa14.22□□□□□ -0.13
CCDC129-209ENST00000471139 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
CCDC129-209ENST00000471139 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
CCDC129-209ENST00000471139 C19orf67A6NJJ6 358 aa14.08□□□□□ -0.16
CCDC129-209ENST00000471139 PROM2Q8N271 834 aa13.99□□□□□ -0.17
CCDC129-209ENST00000471139 GABBR2O75899 941 aa13.94□□□□□ -0.18
CCDC129-209ENST00000471139 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
CCDC129-209ENST00000471139 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
CCDC129-209ENST00000471139 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
CCDC129-209ENST00000471139 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
CCDC129-209ENST00000471139 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
CCDC129-209ENST00000471139 LHX8Q68G74 356 aa13.64□□□□□ -0.23
CCDC129-209ENST00000471139 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
CCDC129-209ENST00000471139 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
CCDC129-209ENST00000471139 CLCN6P51797 869 aa13.6□□□□□ -0.23
CCDC129-209ENST00000471139 DCBLD2Q96PD2 775 aa13.58□□□□□ -0.24
CCDC129-209ENST00000471139 ZNF579Q8NAF0 562 aaKnown RBP13.57□□□□□ -0.24
CCDC129-209ENST00000471139 PAK3O75914 559 aaPredicted RBP13.53□□□□□ -0.24
CCDC129-209ENST00000471139 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC129-209ENST00000471139 VASPP50552 380 aaPredicted RBP13.53□□□□□ -0.24
CCDC129-209ENST00000471139 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
CCDC129-209ENST00000471139 MIER1Q8N108 512 aa13.49□□□□□ -0.25
CCDC129-209ENST00000471139 MNX1P50219 401 aaPredicted RBP13.48□□□□□ -0.25
CCDC129-209ENST00000471139 PHF12Q96QT6 1004 aa13.47□□□□□ -0.25
CCDC129-209ENST00000471139 PLCD3Q8N3E9 789 aa13.43□□□□□ -0.26
CCDC129-209ENST00000471139 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
CCDC129-209ENST00000471139 TSPYL2Q9H2G4 693 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms