RNA–Protein interactions for RNA: ENST00000471041.1

ABCC4-203, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 4

Gene ABCC4, Length 621 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-203ENST00000471041 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
ABCC4-203ENST00000471041 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
ABCC4-203ENST00000471041 PHF23Q9BUL5 403 aaPredicted RBP21.23■□□□□ 0.99
ABCC4-203ENST00000471041 SENP3Q9H4L4 574 aaPredicted RBP20.82■□□□□ 0.92
ABCC4-203ENST00000471041 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
ABCC4-203ENST00000471041 FOXD1Q16676 465 aa19.22■□□□□ 0.67
ABCC4-203ENST00000471041 ADRA2BP18089 450 aa18.65■□□□□ 0.58
ABCC4-203ENST00000471041 PPP6R1Q9UPN7 881 aa18.64■□□□□ 0.57
ABCC4-203ENST00000471041 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
ABCC4-203ENST00000471041 MSH5O43196 834 aa17.72■□□□□ 0.43
ABCC4-203ENST00000471041 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
ABCC4-203ENST00000471041 KCNA4P22459 653 aa17.23■□□□□ 0.35
ABCC4-203ENST00000471041 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
ABCC4-203ENST00000471041 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
ABCC4-203ENST00000471041 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
ABCC4-203ENST00000471041 MAPK8IP2Q13387 824 aaPredicted RBP16.83■□□□□ 0.28
ABCC4-203ENST00000471041 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
ABCC4-203ENST00000471041 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
ABCC4-203ENST00000471041 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
ABCC4-203ENST00000471041 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
ABCC4-203ENST00000471041 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
ABCC4-203ENST00000471041 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
ABCC4-203ENST00000471041 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
ABCC4-203ENST00000471041 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
ABCC4-203ENST00000471041 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
ABCC4-203ENST00000471041 FOXD4L1Q9NU39 408 aa15.86■□□□□ 0.13
ABCC4-203ENST00000471041 ZBTB22O15209 634 aa15.82■□□□□ 0.12
ABCC4-203ENST00000471041 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
ABCC4-203ENST00000471041 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
ABCC4-203ENST00000471041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
ABCC4-203ENST00000471041 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
ABCC4-203ENST00000471041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
ABCC4-203ENST00000471041 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
ABCC4-203ENST00000471041 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
ABCC4-203ENST00000471041 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
ABCC4-203ENST00000471041 SAMD1Q6SPF0 538 aaPredicted RBP15.28■□□□□ 0.04
ABCC4-203ENST00000471041 APLP2Q06481 763 aa15.17■□□□□ 0.02
ABCC4-203ENST00000471041 RNF39Q9H2S5 420 aa15.16■□□□□ 0.02
ABCC4-203ENST00000471041 C1QBPQ07021 282 aaKnown RBP15.05■□□□□ -0
ABCC4-203ENST00000471041 ATF5Q9Y2D1 282 aaPredicted RBP14.99□□□□□ -0.01
ABCC4-203ENST00000471041 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
ABCC4-203ENST00000471041 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
ABCC4-203ENST00000471041 CAPN15O75808 1086 aa14.82□□□□□ -0.04
ABCC4-203ENST00000471041 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
ABCC4-203ENST00000471041 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
ABCC4-203ENST00000471041 POLA2Q14181 598 aa14.6□□□□□ -0.07
ABCC4-203ENST00000471041 ABCB7O75027 752 aa14.51□□□□□ -0.09
ABCC4-203ENST00000471041 DSG3P32926 999 aa14.5□□□□□ -0.09
ABCC4-203ENST00000471041 FBLN2P98095 1184 aa14.48□□□□□ -0.09
ABCC4-203ENST00000471041 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
ABCC4-203ENST00000471041 FKBP8Q14318 412 aa14.44□□□□□ -0.1
ABCC4-203ENST00000471041 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
ABCC4-203ENST00000471041 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
ABCC4-203ENST00000471041 SPDYE2BA6NHP3 402 aa14.07□□□□□ -0.16
ABCC4-203ENST00000471041 SPDYE6P0CI01 402 aa14.07□□□□□ -0.16
ABCC4-203ENST00000471041 SPDYE2Q495Y8 402 aa14.07□□□□□ -0.16
ABCC4-203ENST00000471041 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
ABCC4-203ENST00000471041 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
ABCC4-203ENST00000471041 PROM2Q8N271 834 aa14.01□□□□□ -0.17
ABCC4-203ENST00000471041 FBXO3Q9UK99 471 aa13.96□□□□□ -0.17
ABCC4-203ENST00000471041 SSUH2Q9Y2M2 353 aa13.94□□□□□ -0.18
ABCC4-203ENST00000471041 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
ABCC4-203ENST00000471041 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
ABCC4-203ENST00000471041 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
ABCC4-203ENST00000471041 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
ABCC4-203ENST00000471041 VASPP50552 380 aaPredicted RBP13.69□□□□□ -0.22
ABCC4-203ENST00000471041 AMER1Q5JTC6 1135 aaPredicted RBP13.62□□□□□ -0.23
ABCC4-203ENST00000471041 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
ABCC4-203ENST00000471041 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
ABCC4-203ENST00000471041 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
ABCC4-203ENST00000471041 MIER1Q8N108 512 aa13.49□□□□□ -0.25
ABCC4-203ENST00000471041 RTN4Q9NQC3 1192 aaKnown RBP13.49□□□□□ -0.25
ABCC4-203ENST00000471041 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
ABCC4-203ENST00000471041 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
ABCC4-203ENST00000471041 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
ABCC4-203ENST00000471041 PRR29P0C7W0 189 aa13.42□□□□□ -0.26
ABCC4-203ENST00000471041 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
ABCC4-203ENST00000471041 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
ABCC4-203ENST00000471041 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
ABCC4-203ENST00000471041 SPOCK2Q92563 424 aa13.34□□□□□ -0.27
ABCC4-203ENST00000471041 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
ABCC4-203ENST00000471041 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
ABCC4-203ENST00000471041 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
ABCC4-203ENST00000471041 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
ABCC4-203ENST00000471041 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
ABCC4-203ENST00000471041 PKD2Q13563 968 aa13.11□□□□□ -0.31
ABCC4-203ENST00000471041 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
ABCC4-203ENST00000471041 NUBP1P53384 320 aa13.08□□□□□ -0.32
ABCC4-203ENST00000471041 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
ABCC4-203ENST00000471041 CIZ1Q9ULV3 898 aaPredicted RBP13.08□□□□□ -0.32
ABCC4-203ENST00000471041 GSE1Q14687 1217 aa13.07□□□□□ -0.32
ABCC4-203ENST00000471041 ECM2O94769 699 aaPredicted RBP13.05□□□□□ -0.32
ABCC4-203ENST00000471041 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
ABCC4-203ENST00000471041 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
ABCC4-203ENST00000471041 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
ABCC4-203ENST00000471041 FAM212AQ96EL1 285 aa13.02□□□□□ -0.33
ABCC4-203ENST00000471041 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
ABCC4-203ENST00000471041 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
ABCC4-203ENST00000471041 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
ABCC4-203ENST00000471041 RGL2O15211 777 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms